RNA–Protein interactions for RNA: ENST00000542879.5

ZEB1-209, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 3,645 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-209ENST00000542879 BCANQ96GW7 911 aa7.93□□□□□ -1.14
ZEB1-209ENST00000542879 NAIPQ13075 1403 aa7.93□□□□□ -1.14
ZEB1-209ENST00000542879 FMN1Q68DA7 1419 aa7.93□□□□□ -1.14
ZEB1-209ENST00000542879 POLR1AO95602 1720 aaPredicted RBP7.92□□□□□ -1.14
ZEB1-209ENST00000542879 ZMYM4Q5VZL5 1548 aa7.92□□□□□ -1.14
ZEB1-209ENST00000542879 DENND4BO75064 1496 aaPredicted RBP7.91□□□□□ -1.14
ZEB1-209ENST00000542879 ANP32CO43423 234 aa7.91□□□□□ -1.14
ZEB1-209ENST00000542879 RBM19Q9Y4C8 960 aaKnown RBP7.91□□□□□ -1.14
ZEB1-209ENST00000542879 EHBP1L1Q8N3D4 1523 aa7.91□□□□□ -1.14
ZEB1-209ENST00000542879 HIRIP3Q9BW71 556 aaPredicted RBP7.91□□□□□ -1.14
ZEB1-209ENST00000542879 NCOA2Q15596 1464 aa7.9□□□□□ -1.14
ZEB1-209ENST00000542879 MYOM3Q5VTT5 1437 aa7.9□□□□□ -1.14
ZEB1-209ENST00000542879 CROCC2H7BZ55 1655 aa7.9□□□□□ -1.14
ZEB1-209ENST00000542879 P3H3Q8IVL6 736 aa7.9□□□□□ -1.14
ZEB1-209ENST00000542879 TONSLQ96HA7 1378 aa7.9□□□□□ -1.14
ZEB1-209ENST00000542879 TRIM52Q96A61 297 aa7.9□□□□□ -1.15
ZEB1-209ENST00000542879 TCOF1Q13428 1488 aaKnown RBP7.9□□□□□ -1.15
ZEB1-209ENST00000542879 MAGI3Q5TCQ9 1506 aa7.89□□□□□ -1.15
ZEB1-209ENST00000542879 WDR7Q9Y4E6 1490 aa7.89□□□□□ -1.15
ZEB1-209ENST00000542879 KDM6BO15054 1643 aa7.88□□□□□ -1.15
ZEB1-209ENST00000542879 PREX2Q70Z35 1606 aa7.88□□□□□ -1.15
ZEB1-209ENST00000542879 MAST1Q9Y2H9 1570 aa7.88□□□□□ -1.15
ZEB1-209ENST00000542879 NEFLP07196 543 aa7.88□□□□□ -1.15
ZEB1-209ENST00000542879 ERCC6L2Q5T890 1561 aa7.88□□□□□ -1.15
ZEB1-209ENST00000542879 AKNAQ7Z591 1439 aa7.87□□□□□ -1.15
ZEB1-209ENST00000542879 RICTORQ6R327 1708 aa7.87□□□□□ -1.15
ZEB1-209ENST00000542879 UBE2Q2Q8WVN8 375 aa7.86□□□□□ -1.15
ZEB1-209ENST00000542879 ITSN2Q9NZM3 1697 aa7.86□□□□□ -1.15
ZEB1-209ENST00000542879 MTUS2Q5JR59 1369 aa7.86□□□□□ -1.15
ZEB1-209ENST00000542879 WASHC2AQ641Q2 1341 aa7.85□□□□□ -1.15
ZEB1-209ENST00000542879 MYO5CQ9NQX4 1742 aa7.84□□□□□ -1.15
ZEB1-209ENST00000542879 DNAJC5Q9H3Z4 198 aa7.84□□□□□ -1.15
ZEB1-209ENST00000542879 ATP1B4Q9UN42 357 aaPredicted RBP7.84□□□□□ -1.15
ZEB1-209ENST00000542879 FRMPD1Q5SYB0 1578 aa7.84□□□□□ -1.15
ZEB1-209ENST00000542879 FANCIQ9NVI1 1328 aa7.84□□□□□ -1.15
ZEB1-209ENST00000542879 CNTLNQ9NXG0 1405 aa7.84□□□□□ -1.16
ZEB1-209ENST00000542879 KDM5CP41229 1560 aa7.84□□□□□ -1.16
ZEB1-209ENST00000542879 MROH2AA6NES4 1674 aa7.83□□□□□ -1.16
ZEB1-209ENST00000542879 CDC42BPAQ5VT25 1732 aa7.83□□□□□ -1.16
ZEB1-209ENST00000542879 NCOA1Q15788 1441 aa7.82□□□□□ -1.16
ZEB1-209ENST00000542879 ERICH6BQ5W0A0 696 aa7.82□□□□□ -1.16
ZEB1-209ENST00000542879 ANO8Q9HCE9 1232 aaPredicted RBP7.82□□□□□ -1.16
ZEB1-209ENST00000542879 KDM5AP29375 1690 aaKnown RBP7.82□□□□□ -1.16
ZEB1-209ENST00000542879 HSPA5P11021 654 aaKnown RBP7.82□□□□□ -1.16
ZEB1-209ENST00000542879 AEBP2Q6ZN18 517 aaPredicted RBP7.82□□□□□ -1.16
ZEB1-209ENST00000542879 EIF2AK4Q9P2K8 1649 aaKnown RBP7.81□□□□□ -1.16
ZEB1-209ENST00000542879 ERICH6Q7L0X2 663 aa7.8□□□□□ -1.16
ZEB1-209ENST00000542879 ABCC10Q5T3U5 1492 aa7.8□□□□□ -1.16
ZEB1-209ENST00000542879 TEX14Q8IWB6 1497 aa7.8□□□□□ -1.16
ZEB1-209ENST00000542879 CDC42BPBQ9Y5S2 1711 aa7.8□□□□□ -1.16
ZEB1-209ENST00000542879 MIA2Q96PC5 1412 aa7.8□□□□□ -1.16
ZEB1-209ENST00000542879 HNRNPUQ00839 825 aaKnown RBP eCLIP7.8□□□□□ -1.16
ZEB1-209ENST00000542879 DNMT1P26358 1616 aaKnown RBP7.8□□□□□ -1.16
ZEB1-209ENST00000542879 ARHGEF5Q12774 1597 aa7.8□□□□□ -1.16
ZEB1-209ENST00000542879 EPRSP07814 1512 aaKnown RBP7.79□□□□□ -1.16
ZEB1-209ENST00000542879 SPATA31E1Q6ZUB1 1445 aa7.79□□□□□ -1.16
ZEB1-209ENST00000542879 RPRD2Q5VT52 1461 aaKnown RBP7.79□□□□□ -1.16
ZEB1-209ENST00000542879 DEPDC5O75140 1603 aa7.79□□□□□ -1.16
ZEB1-209ENST00000542879 CCDC7Q96M83 1385 aa7.79□□□□□ -1.16
ZEB1-209ENST00000542879 INO80Q9ULG1 1556 aaPredicted RBP7.78□□□□□ -1.16
ZEB1-209ENST00000542879 CCDC184Q52MB2 194 aa7.78□□□□□ -1.16
ZEB1-209ENST00000542879 PLXNC1O60486 1568 aa7.78□□□□□ -1.16
ZEB1-209ENST00000542879 C11orf95C9JLR9 678 aaPredicted RBP7.77□□□□□ -1.17
ZEB1-209ENST00000542879 ZC3H13Q5T200 1668 aaKnown RBP7.77□□□□□ -1.17
ZEB1-209ENST00000542879 TDRD9Q8NDG6 1382 aaKnown RBP7.77□□□□□ -1.17
ZEB1-209ENST00000542879 PLB1Q6P1J6 1458 aa7.77□□□□□ -1.17
ZEB1-209ENST00000542879 CDK13Q14004 1512 aaKnown RBP7.77□□□□□ -1.17
ZEB1-209ENST00000542879 EIF4G2P78344 907 aaKnown RBP eCLIP7.77□□□□□ -1.17
ZEB1-209ENST00000542879 ANKRD30BQ9BXX2 1392 aa7.77□□□□□ -1.17
ZEB1-209ENST00000542879 PRKRIP1Q9H875 184 aaPredicted RBP7.76□□□□□ -1.17
ZEB1-209ENST00000542879 PPP4R2Q9NY27 417 aa7.76□□□□□ -1.17
ZEB1-209ENST00000542879 ROCK1Q13464 1354 aa7.76□□□□□ -1.17
ZEB1-209ENST00000542879 ADGBQ8N7X0 1667 aa7.76□□□□□ -1.17
ZEB1-209ENST00000542879 ZBED9Q6R2W3 1325 aa7.76□□□□□ -1.17
ZEB1-209ENST00000542879 CDK11AQ9UQ88 783 aaPredicted RBP7.76□□□□□ -1.17
ZEB1-209ENST00000542879 RNF17Q9BXT8 1623 aaKnown RBP7.76□□□□□ -1.17
ZEB1-209ENST00000542879 MBD5Q9P267 1494 aa7.76□□□□□ -1.17
ZEB1-209ENST00000542879 IRX6P78412 446 aaPredicted RBP7.76□□□□□ -1.17
ZEB1-209ENST00000542879 RRP7BPQ9NSQ0 103 aa7.76□□□□□ -1.17
ZEB1-209ENST00000542879 NUP153P49790 1475 aaKnown RBP7.75□□□□□ -1.17
ZEB1-209ENST00000542879 MPHOSPH9Q99550 1183 aa7.75□□□□□ -1.17
ZEB1-209ENST00000542879 L3MBTL2Q969R5 705 aa7.75□□□□□ -1.17
ZEB1-209ENST00000542879 DAPK1P53355 1430 aa7.75□□□□□ -1.17
ZEB1-209ENST00000542879 NEO1Q92859 1461 aa7.74□□□□□ -1.17
ZEB1-209ENST00000542879 NEURL4Q96JN8 1562 aa7.74□□□□□ -1.17
ZEB1-209ENST00000542879 KIF14Q15058 1648 aa7.74□□□□□ -1.17
ZEB1-209ENST00000542879 NBPF8Q3BBV2 869 aa7.73□□□□□ -1.17
ZEB1-209ENST00000542879 CARMIL2Q6F5E8 1435 aa7.73□□□□□ -1.17
ZEB1-209ENST00000542879 ABCC5O15440 1437 aa7.73□□□□□ -1.17
ZEB1-209ENST00000542879 ARHGEF40Q8TER5 1519 aa7.73□□□□□ -1.17
ZEB1-209ENST00000542879 CHIC2Q9UKJ5 165 aa7.72□□□□□ -1.17
ZEB1-209ENST00000542879 DHX29Q7Z478 1369 aaKnown RBP7.72□□□□□ -1.17
ZEB1-209ENST00000542879 PZPP20742 1482 aa7.72□□□□□ -1.17
ZEB1-209ENST00000542879 ZNF142P52746 1687 aaPredicted RBP7.72□□□□□ -1.17
ZEB1-209ENST00000542879 KIF7Q2M1P5 1343 aa7.72□□□□□ -1.17
ZEB1-209ENST00000542879 SMG6Q86US8 1419 aaKnown RBP7.72□□□□□ -1.17
ZEB1-209ENST00000542879 AGLP35573 1532 aa7.72□□□□□ -1.17
ZEB1-209ENST00000542879 ADAMTSL3P82987 1691 aa7.71□□□□□ -1.17
ZEB1-209ENST00000542879 RNF123Q5XPI4 1314 aa7.71□□□□□ -1.17
ZEB1-209ENST00000542879 E9PCH4 1651 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms