RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 CCDC184Q52MB2 194 aa7.26□□□□□ -1.25
KDM3B-209ENST00000542866 KLHL34Q8N239 644 aa7.26□□□□□ -1.25
KDM3B-209ENST00000542866 NOP58Q9Y2X3 529 aaKnown RBP7.26□□□□□ -1.25
KDM3B-209ENST00000542866 HSPA5P11021 654 aaKnown RBP7.26□□□□□ -1.25
KDM3B-209ENST00000542866 ERICH6BQ5W0A0 696 aa7.25□□□□□ -1.25
KDM3B-209ENST00000542866 MRS2Q9HD23 443 aa7.25□□□□□ -1.25
KDM3B-209ENST00000542866 CFDP1Q9UEE9 299 aaPredicted RBP7.25□□□□□ -1.25
KDM3B-209ENST00000542866 ANO8Q9HCE9 1232 aaPredicted RBP7.25□□□□□ -1.25
KDM3B-209ENST00000542866 PAK3O75914 559 aaPredicted RBP7.24□□□□□ -1.25
KDM3B-209ENST00000542866 WASHC2AQ641Q2 1341 aa7.24□□□□□ -1.25
KDM3B-209ENST00000542866 UBE2Q2Q8WVN8 375 aa7.23□□□□□ -1.25
KDM3B-209ENST00000542866 SENP3-EIF4A1A0A087X0R7 540 aa7.23□□□□□ -1.25
KDM3B-209ENST00000542866 RTL5Q5HYW3 569 aaPredicted RBP7.23□□□□□ -1.25
KDM3B-209ENST00000542866 EIF4G2P78344 907 aaKnown RBP eCLIP7.22□□□□□ -1.25
KDM3B-209ENST00000542866 UACAQ9BZF9 1416 aa7.22□□□□□ -1.25
KDM3B-209ENST00000542866 CASKIN1Q8WXD9 1431 aa7.22□□□□□ -1.25
KDM3B-209ENST00000542866 CHIC2Q9UKJ5 165 aa7.22□□□□□ -1.25
KDM3B-209ENST00000542866 TSPY4P0CV99 314 aa7.21□□□□□ -1.25
KDM3B-209ENST00000542866 TSPY10P0CW01 314 aa7.21□□□□□ -1.25
KDM3B-209ENST00000542866 AMER1Q5JTC6 1135 aaPredicted RBP7.21□□□□□ -1.25
KDM3B-209ENST00000542866 CEP170Q5SW79 1584 aa7.21□□□□□ -1.25
KDM3B-209ENST00000542866 MAP3K1Q13233 1512 aa7.21□□□□□ -1.26
KDM3B-209ENST00000542866 ANP32AP39687 249 aaKnown RBP7.21□□□□□ -1.26
KDM3B-209ENST00000542866 RRP7BPQ9NSQ0 103 aa7.21□□□□□ -1.26
KDM3B-209ENST00000542866 CCDC18Q5T9S5 1454 aa7.21□□□□□ -1.26
KDM3B-209ENST00000542866 UGGT2Q9NYU1 1516 aa7.21□□□□□ -1.26
KDM3B-209ENST00000542866 POLR3GLQ9BT43 218 aa7.21□□□□□ -1.26
KDM3B-209ENST00000542866 CCDC136Q96JN2 1154 aa7.2□□□□□ -1.26
KDM3B-209ENST00000542866 PLB1Q6P1J6 1458 aa7.2□□□□□ -1.26
KDM3B-209ENST00000542866 PRKRIP1Q9H875 184 aaPredicted RBP7.2□□□□□ -1.26
KDM3B-209ENST00000542866 ZBTB47Q9UFB7 747 aaPredicted RBP7.2□□□□□ -1.26
KDM3B-209ENST00000542866 FYCO1Q9BQS8 1478 aa7.19□□□□□ -1.26
KDM3B-209ENST00000542866 EFCAB2Q5VUJ9 269 aa7.19□□□□□ -1.26
KDM3B-209ENST00000542866 C11orf95C9JLR9 678 aaPredicted RBP7.18□□□□□ -1.26
KDM3B-209ENST00000542866 FAM69CQ0P6D2 419 aa7.18□□□□□ -1.26
KDM3B-209ENST00000542866 NPM2Q86SE8 214 aaKnown RBP7.18□□□□□ -1.26
KDM3B-209ENST00000542866 ZBED9Q6R2W3 1325 aa7.18□□□□□ -1.26
KDM3B-209ENST00000542866 CHD1O14646 1710 aa7.18□□□□□ -1.26
KDM3B-209ENST00000542866 FOXD1Q16676 465 aa7.18□□□□□ -1.26
KDM3B-209ENST00000542866 FGD6Q6ZV73 1430 aa7.18□□□□□ -1.26
KDM3B-209ENST00000542866 CTTNBP2Q8WZ74 1663 aa7.18□□□□□ -1.26
KDM3B-209ENST00000542866 IPO9Q96P70 1041 aaKnown RBP7.18□□□□□ -1.26
KDM3B-209ENST00000542866 PCF11O94913 1555 aaKnown RBP7.17□□□□□ -1.26
KDM3B-209ENST00000542866 DISP1Q96F81 1524 aa7.17□□□□□ -1.26
KDM3B-209ENST00000542866 PTPRKQ15262 1439 aa7.17□□□□□ -1.26
KDM3B-209ENST00000542866 KCNA4P22459 653 aa7.17□□□□□ -1.26
KDM3B-209ENST00000542866 L3MBTL2Q969R5 705 aa7.16□□□□□ -1.26
KDM3B-209ENST00000542866 KIAA0556O60303 1618 aa7.16□□□□□ -1.26
KDM3B-209ENST00000542866 CNTLNQ9NXG0 1405 aa7.16□□□□□ -1.26
KDM3B-209ENST00000542866 PODXL2Q9NZ53 605 aa7.16□□□□□ -1.26
KDM3B-209ENST00000542866 HFM1A2PYH4 1435 aa7.15□□□□□ -1.26
KDM3B-209ENST00000542866 HECW1Q76N89 1606 aa7.15□□□□□ -1.26
KDM3B-209ENST00000542866 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.15□□□□□ -1.26
KDM3B-209ENST00000542866 EPRSP07814 1512 aaKnown RBP7.15□□□□□ -1.26
KDM3B-209ENST00000542866 AKNAQ7Z591 1439 aa7.15□□□□□ -1.26
KDM3B-209ENST00000542866 NAIPQ13075 1403 aa7.14□□□□□ -1.27
KDM3B-209ENST00000542866 CCDC7Q96M83 1385 aa7.14□□□□□ -1.27
KDM3B-209ENST00000542866 TROQ12816 1431 aaPredicted RBP7.14□□□□□ -1.27
KDM3B-209ENST00000542866 SALL2Q9Y467 1007 aaPredicted RBP7.14□□□□□ -1.27
KDM3B-209ENST00000542866 LAS1LQ9Y4W2 734 aaKnown RBP7.14□□□□□ -1.27
KDM3B-209ENST00000542866 CDK13Q14004 1512 aaKnown RBP7.13□□□□□ -1.27
KDM3B-209ENST00000542866 IL27Q8NEV9 243 aa7.13□□□□□ -1.27
KDM3B-209ENST00000542866 NUDCQ9Y266 331 aa7.13□□□□□ -1.27
KDM3B-209ENST00000542866 MPHOSPH9Q99550 1183 aa7.13□□□□□ -1.27
KDM3B-209ENST00000542866 ESF1Q9H501 851 aaKnown RBP7.13□□□□□ -1.27
KDM3B-209ENST00000542866 ARHGEF11O15085 1522 aa7.13□□□□□ -1.27
KDM3B-209ENST00000542866 ZNF326Q5BKZ1 582 aaKnown RBP7.13□□□□□ -1.27
KDM3B-209ENST00000542866 CFAP43Q8NDM7 1665 aa7.12□□□□□ -1.27
KDM3B-209ENST00000542866 PTPN23Q9H3S7 1636 aa7.12□□□□□ -1.27
KDM3B-209ENST00000542866 KIF7Q2M1P5 1343 aa7.12□□□□□ -1.27
KDM3B-209ENST00000542866 TULP1O00294 542 aaPredicted RBP7.12□□□□□ -1.27
KDM3B-209ENST00000542866 NBPF8Q3BBV2 869 aa7.12□□□□□ -1.27
KDM3B-209ENST00000542866 NUP153P49790 1475 aaKnown RBP7.11□□□□□ -1.27
KDM3B-209ENST00000542866 HNRNPMP52272 730 aaKnown RBP eCLIP7.11□□□□□ -1.27
KDM3B-209ENST00000542866 NEFMP07197 916 aa7.11□□□□□ -1.27
KDM3B-209ENST00000542866 ATP10BO94823 1461 aa7.11□□□□□ -1.27
KDM3B-209ENST00000542866 CLASP1Q7Z460 1538 aa7.11□□□□□ -1.27
KDM3B-209ENST00000542866 SAMD9Q5K651 1589 aa7.11□□□□□ -1.27
KDM3B-209ENST00000542866 RSPH4AQ5TD94 716 aa7.1□□□□□ -1.27
KDM3B-209ENST00000542866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.1□□□□□ -1.278e-9■■□□□ 12.6
KDM3B-209ENST00000542866 NCOA2Q15596 1464 aa7.1□□□□□ -1.27
KDM3B-209ENST00000542866 KDM5BQ9UGL1 1544 aa7.1□□□□□ -1.27
KDM3B-209ENST00000542866 RAPGEF6Q8TEU7 1601 aa7.1□□□□□ -1.27
KDM3B-209ENST00000542866 ABCC2Q92887 1545 aa7.1□□□□□ -1.27
KDM3B-209ENST00000542866 TMC1Q8TDI8 760 aa7.1□□□□□ -1.27
KDM3B-209ENST00000542866 ARID4BQ4LE39 1312 aaPredicted RBP7.1□□□□□ -1.27
KDM3B-209ENST00000542866 NCOA1Q15788 1441 aa7.1□□□□□ -1.27
KDM3B-209ENST00000542866 MYOM3Q5VTT5 1437 aa7.1□□□□□ -1.27
KDM3B-209ENST00000542866 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.09□□□□□ -1.27
KDM3B-209ENST00000542866 SMG6Q86US8 1419 aaKnown RBP7.09□□□□□ -1.27
KDM3B-209ENST00000542866 EHBP1L1Q8N3D4 1523 aa7.09□□□□□ -1.27
KDM3B-209ENST00000542866 ASXL2Q76L83 1435 aa7.09□□□□□ -1.27
KDM3B-209ENST00000542866 ERCC6L2Q5T890 1561 aa7.09□□□□□ -1.27
KDM3B-209ENST00000542866 SPAG9O60271 1321 aaKnown RBP7.09□□□□□ -1.27
KDM3B-209ENST00000542866 ZNF644Q9H582 1327 aaPredicted RBP7.08□□□□□ -1.28
KDM3B-209ENST00000542866 PKNOX2Q96KN3 472 aa7.08□□□□□ -1.28
KDM3B-209ENST00000542866 EXOC6Q8TAG9 804 aa7.08□□□□□ -1.28
KDM3B-209ENST00000542866 SLC4A1APQ9BWU0 796 aaKnown RBP7.08□□□□□ -1.28
KDM3B-209ENST00000542866 CD109Q6YHK3 1445 aa7.07□□□□□ -1.28
KDM3B-209ENST00000542866 ARHGAP5Q13017 1502 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms