RNA–Protein interactions for RNA: ENST00000542565.1

NCOR2-223, Transcript of nuclear receptor corepressor 2, human

TSL 3

Gene NCOR2, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR2-223	ENST00000542565	ZMYM4	Q5VZL5	1548 aa		32.51	■■■□□ 2.8
NCOR2-223	ENST00000542565	PREX2	Q70Z35	1606 aa		32.51	■■■□□ 2.79
NCOR2-223	ENST00000542565	POGZ	Q7Z3K3	1410 aa		32.51	■■■□□ 2.79
NCOR2-223	ENST00000542565	MTUS2	Q5JR59	1369 aa		32.48	■■■□□ 2.79
NCOR2-223	ENST00000542565	CDC42BPB	Q9Y5S2	1711 aa		32.48	■■■□□ 2.79
NCOR2-223	ENST00000542565	VPS8	Q8N3P4	1428 aa		32.47	■■■□□ 2.79
NCOR2-223	ENST00000542565	MAGI2	Q86UL8	1455 aa		32.47	■■■□□ 2.79
NCOR2-223	ENST00000542565	ARHGEF40	Q8TER5	1519 aa		32.46	■■■□□ 2.79
NCOR2-223	ENST00000542565	CDC42BPA	Q5VT25	1732 aa		32.43	■■■□□ 2.78
NCOR2-223	ENST00000542565	EHBP1L1	Q8N3D4	1523 aa		32.42	■■■□□ 2.78
NCOR2-223	ENST00000542565	ZNF518A	Q6AHZ1	1483 aa		32.4	■■■□□ 2.78
NCOR2-223	ENST00000542565	ZFYVE16	Q7Z3T8	1539 aa		32.4	■■■□□ 2.78
NCOR2-223	ENST00000542565	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.4	■■■□□ 2.78
NCOR2-223	ENST00000542565	ABCC1	P33527	1531 aa		32.36	■■■□□ 2.77
NCOR2-223	ENST00000542565	YEATS2	Q9ULM3	1422 aa		32.34	■■■□□ 2.77
NCOR2-223	ENST00000542565	CCNB3	Q8WWL7	1395 aa		32.34	■■■□□ 2.77
NCOR2-223	ENST00000542565	KDM5C	P41229	1560 aa		32.34	■■■□□ 2.77
NCOR2-223	ENST00000542565	TIAM1	Q13009	1591 aa		32.33	■■■□□ 2.77
NCOR2-223	ENST00000542565	AFAP1	Q8N556	730 aa		32.31	■■■□□ 2.76
NCOR2-223	ENST00000542565	ARHGEF12	Q9NZN5	1544 aa		32.3	■■■□□ 2.76
NCOR2-223	ENST00000542565	ITSN2	Q9NZM3	1697 aa		32.28	■■■□□ 2.76
NCOR2-223	ENST00000542565	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.28	■■■□□ 2.76
NCOR2-223	ENST00000542565	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.27	■■■□□ 2.76
NCOR2-223	ENST00000542565	MAP3K1	Q13233	1512 aa		32.27	■■■□□ 2.76
NCOR2-223	ENST00000542565	SAMD9L	Q8IVG5	1584 aa		32.27	■■■□□ 2.76
NCOR2-223	ENST00000542565	TRAPPC8	Q9Y2L5	1435 aa		32.26	■■■□□ 2.75
NCOR2-223	ENST00000542565	ADAMTSL3	P82987	1691 aa		32.25	■■■□□ 2.75
NCOR2-223	ENST00000542565	ATP10A	O60312	1499 aa		32.25	■■■□□ 2.75
NCOR2-223	ENST00000542565	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.25	■■■□□ 2.75
NCOR2-223	ENST00000542565	BCORL1	Q5H9F3	1711 aa		32.25	■■■□□ 2.75
NCOR2-223	ENST00000542565	HECW2	Q9P2P5	1572 aa		32.24	■■■□□ 2.75
NCOR2-223	ENST00000542565	PLEKHH2	Q8IVE3	1493 aa		32.24	■■■□□ 2.75
NCOR2-223	ENST00000542565	MLH3	Q9UHC1	1453 aa		32.24	■■■□□ 2.75
NCOR2-223	ENST00000542565	KIAA1107	Q9UPP5	1409 aa		32.23	■■■□□ 2.75
NCOR2-223	ENST00000542565	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.23	■■■□□ 2.75
NCOR2-223	ENST00000542565	C9orf84	Q5VXU9	1444 aa		32.22	■■■□□ 2.75
NCOR2-223	ENST00000542565	NCOA2	Q15596	1464 aa		32.21	■■■□□ 2.75
NCOR2-223	ENST00000542565	LRRC9	Q6ZRR7	1453 aa		32.21	■■■□□ 2.75
NCOR2-223	ENST00000542565	SYCP2	Q9BX26	1530 aa		32.19	■■■□□ 2.74
NCOR2-223	ENST00000542565	MYT1L	Q9UL68	1186 aa		32.17	■■■□□ 2.74
NCOR2-223	ENST00000542565	SIGLEC1	Q9BZZ2	1709 aa		32.16	■■■□□ 2.74
NCOR2-223	ENST00000542565	DIP2C	Q9Y2E4	1556 aa		32.14	■■■□□ 2.74
NCOR2-223	ENST00000542565	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.13	■■■□□ 2.73	1e-6	■■■■□ 23.3
NCOR2-223	ENST00000542565	RERE	Q9P2R6	1566 aa		32.13	■■■□□ 2.73
NCOR2-223	ENST00000542565	MADD	Q8WXG6	1647 aa		32.11	■■■□□ 2.73
NCOR2-223	ENST00000542565	PTPRM	P28827	1452 aa		32.11	■■■□□ 2.73
NCOR2-223	ENST00000542565	ABCA6	Q8N139	1617 aa		32.11	■■■□□ 2.73
NCOR2-223	ENST00000542565	KIDINS220	Q9ULH0	1771 aa		32.08	■■■□□ 2.73
NCOR2-223	ENST00000542565	SPAG9	O60271	1321 aa	Known RBP	32.07	■■■□□ 2.72
NCOR2-223	ENST00000542565	APLP2	Q06481	763 aa		32.07	■■■□□ 2.72
NCOR2-223	ENST00000542565	KANK4	Q5T7N3	995 aa	Predicted RBP	32.07	■■■□□ 2.72
NCOR2-223	ENST00000542565	ZNF644	Q9H582	1327 aa	Predicted RBP	32.06	■■■□□ 2.72
NCOR2-223	ENST00000542565	MBD5	Q9P267	1494 aa		32.04	■■■□□ 2.72
NCOR2-223	ENST00000542565	MLEC	Q14165	292 aa		32.02	■■■□□ 2.72
NCOR2-223	ENST00000542565	AGL	P35573	1532 aa		32.01	■■■□□ 2.72
NCOR2-223	ENST00000542565	ATP7A	Q04656	1500 aa		32	■■■□□ 2.71
NCOR2-223	ENST00000542565	RIMS1	Q86UR5	1692 aa	Known RBP	32	■■■□□ 2.71
NCOR2-223	ENST00000542565	INO80	Q9ULG1	1556 aa	Predicted RBP	32	■■■□□ 2.71
NCOR2-223	ENST00000542565	CAMSAP2	Q08AD1	1489 aa		31.99	■■■□□ 2.71
NCOR2-223	ENST00000542565	RSPH4A	Q5TD94	716 aa		31.97	■■■□□ 2.71
NCOR2-223	ENST00000542565	FER1L4	A9Z1Z3	1794 aa		31.94	■■■□□ 2.7
NCOR2-223	ENST00000542565	RTEL1-TNFRSF6B	F6WH68	1400 aa		31.93	■■■□□ 2.7
NCOR2-223	ENST00000542565	MYOM3	Q5VTT5	1437 aa		31.93	■■■□□ 2.7
NCOR2-223	ENST00000542565	MIA2	Q96PC5	1412 aa		31.93	■■■□□ 2.7
NCOR2-223	ENST00000542565	CCDC141	Q6ZP82	1450 aa		31.92	■■■□□ 2.7
NCOR2-223	ENST00000542565	ARHGEF5	Q12774	1597 aa		31.9	■■■□□ 2.7
NCOR2-223	ENST00000542565	A2M	P01023	1474 aa		31.88	■■■□□ 2.69
NCOR2-223	ENST00000542565	PLXNC1	O60486	1568 aa		31.86	■■■□□ 2.69
NCOR2-223	ENST00000542565	ADGB	Q8N7X0	1667 aa		31.84	■■■□□ 2.69
NCOR2-223	ENST00000542565	TSPY4	P0CV99	314 aa		31.79	■■■□□ 2.68
NCOR2-223	ENST00000542565	TSPY10	P0CW01	314 aa		31.79	■■■□□ 2.68
NCOR2-223	ENST00000542565	ESF1	Q9H501	851 aa	Known RBP	31.77	■■■□□ 2.68
NCOR2-223	ENST00000542565	CNTLN	Q9NXG0	1405 aa		31.76	■■■□□ 2.68
NCOR2-223	ENST00000542565	PLPPR3	Q6T4P5	718 aa		31.76	■■■□□ 2.67
NCOR2-223	ENST00000542565	DHX29	Q7Z478	1369 aa	Known RBP	31.75	■■■□□ 2.67
NCOR2-223	ENST00000542565	MAST1	Q9Y2H9	1570 aa		31.73	■■■□□ 2.67
NCOR2-223	ENST00000542565	LMTK3	Q96Q04	1460 aa		31.72	■■■□□ 2.67
NCOR2-223	ENST00000542565	FGD6	Q6ZV73	1430 aa		31.71	■■■□□ 2.67
NCOR2-223	ENST00000542565	PTPN23	Q9H3S7	1636 aa		31.71	■■■□□ 2.67
NCOR2-223	ENST00000542565	CEBPA	P49715	358 aa	Predicted RBP	31.69	■■■□□ 2.66
NCOR2-223	ENST00000542565	PPP6R1	Q9UPN7	881 aa		31.68	■■■□□ 2.66
NCOR2-223	ENST00000542565	TCOF1	Q13428	1488 aa	Known RBP	31.67	■■■□□ 2.66
NCOR2-223	ENST00000542565	C3	P01024	1663 aa		31.65	■■■□□ 2.66
NCOR2-223	ENST00000542565	MROH2A	A6NES4	1674 aa		31.64	■■■□□ 2.66
NCOR2-223	ENST00000542565	GGT6	Q6P531	493 aa		31.64	■■■□□ 2.66
NCOR2-223	ENST00000542565	SHANK2	Q9UPX8	1470 aa		31.61	■■■□□ 2.65
NCOR2-223	ENST00000542565	ABCC5	O15440	1437 aa		31.61	■■■□□ 2.65
NCOR2-223	ENST00000542565	PREX1	Q8TCU6	1659 aa		31.6	■■■□□ 2.65
NCOR2-223	ENST00000542565	ZMYM3	Q14202	1370 aa		31.59	■■■□□ 2.65
NCOR2-223	ENST00000542565	KIF3B	O15066	747 aa		31.59	■■■□□ 2.65
NCOR2-223	ENST00000542565	DNMT1	P26358	1616 aa	Known RBP	31.57	■■■□□ 2.64
NCOR2-223	ENST00000542565	CROCC2	H7BZ55	1655 aa		31.57	■■■□□ 2.64
NCOR2-223	ENST00000542565	CLTC	Q00610	1675 aa	Known RBP	31.57	■■■□□ 2.64
NCOR2-223	ENST00000542565	DAPK1	P53355	1430 aa		31.57	■■■□□ 2.64
NCOR2-223	ENST00000542565	FAM135A	Q9P2D6	1515 aa		31.55	■■■□□ 2.64
NCOR2-223	ENST00000542565	NPAT	Q14207	1427 aa		31.54	■■■□□ 2.64
NCOR2-223	ENST00000542565	UHRF1BP1	Q6BDS2	1440 aa		31.54	■■■□□ 2.64
NCOR2-223	ENST00000542565	SETD1B	Q9UPS6	1966 aa	Known RBP	31.52	■■■□□ 2.64
NCOR2-223	ENST00000542565	DUOX2	Q9NRD8	1548 aa		31.51	■■■□□ 2.63
NCOR2-223	ENST00000542565	EIF2AK4	Q9P2K8	1649 aa	Known RBP	31.5	■■■□□ 2.63

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms