RNA–Protein interactions for RNA: ENST00000541645.1

UBC-210, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-210ENST00000541645 CCNB3Q8WWL7 1395 aa28.17■■■□□ 2.1
UBC-210ENST00000541645 RAPGEF3O95398 923 aa28.17■■■□□ 2.1
UBC-210ENST00000541645 APLP2Q06481 763 aa28.17■■■□□ 2.1
UBC-210ENST00000541645 ADGRL1O94910 1474 aa28.16■■■□□ 2.1
UBC-210ENST00000541645 PREX2Q70Z35 1606 aa28.15■■■□□ 2.1
UBC-210ENST00000541645 SCAPERQ9BY12 1400 aa28.14■■■□□ 2.1
UBC-210ENST00000541645 KANK4Q5T7N3 995 aaPredicted RBP28.12■■■□□ 2.09
UBC-210ENST00000541645 NCOA2Q15596 1464 aa28.1■■■□□ 2.09
UBC-210ENST00000541645 CDC42BPBQ9Y5S2 1711 aa28.1■■■□□ 2.09
UBC-210ENST00000541645 CFDP1Q9UEE9 299 aaPredicted RBP28.1■■■□□ 2.09
UBC-210ENST00000541645 CDC42BPAQ5VT25 1732 aa28.09■■■□□ 2.09
UBC-210ENST00000541645 FRMPD1Q5SYB0 1578 aa28.08■■■□□ 2.09
UBC-210ENST00000541645 POGZQ7Z3K3 1410 aa28.08■■■□□ 2.09
UBC-210ENST00000541645 SUPT6HQ7KZ85 1726 aaKnown RBP28.06■■■□□ 2.08
UBC-210ENST00000541645 RICTORQ6R327 1708 aa28.04■■■□□ 2.08
UBC-210ENST00000541645 ZMYM4Q5VZL5 1548 aa28.02■■■□□ 2.08
UBC-210ENST00000541645 ZNF518AQ6AHZ1 1483 aa28.02■■■□□ 2.08
UBC-210ENST00000541645 ABCC1P33527 1531 aa28.02■■■□□ 2.08
UBC-210ENST00000541645 MAGI2Q86UL8 1455 aa28.02■■■□□ 2.08
UBC-210ENST00000541645 KIAA1107Q9UPP5 1409 aa28.01■■■□□ 2.08
UBC-210ENST00000541645 ZNF777Q9ULD5 760 aaPredicted RBP28.01■■■□□ 2.07
UBC-210ENST00000541645 PLEKHH2Q8IVE3 1493 aa28.01■■■□□ 2.07
UBC-210ENST00000541645 ARHGEF12Q9NZN5 1544 aa27.98■■■□□ 2.07
UBC-210ENST00000541645 AFAP1Q8N556 730 aa27.98■■■□□ 2.07
UBC-210ENST00000541645 ITSN2Q9NZM3 1697 aa27.97■■■□□ 2.07
UBC-210ENST00000541645 SAMD9LQ8IVG5 1584 aa27.97■■■□□ 2.07
UBC-210ENST00000541645 KDM5CP41229 1560 aa27.94■■■□□ 2.06
UBC-210ENST00000541645 TRAPPC8Q9Y2L5 1435 aa27.94■■■□□ 2.06
UBC-210ENST00000541645 ZNF644Q9H582 1327 aaPredicted RBP27.92■■■□□ 2.06
UBC-210ENST00000541645 HNRNPMP52272 730 aaKnown RBP eCLIP27.91■■■□□ 2.063e-6■■■□□ 16.5
UBC-210ENST00000541645 MYOM3Q5VTT5 1437 aa27.91■■■□□ 2.06
UBC-210ENST00000541645 MLH3Q9UHC1 1453 aa27.9■■■□□ 2.06
UBC-210ENST00000541645 ZFYVE16Q7Z3T8 1539 aa27.9■■■□□ 2.06
UBC-210ENST00000541645 ARHGEF40Q8TER5 1519 aa27.9■■■□□ 2.06
UBC-210ENST00000541645 SYCP2Q9BX26 1530 aa27.9■■■□□ 2.06
UBC-210ENST00000541645 MIA2Q96PC5 1412 aa27.9■■■□□ 2.06
UBC-210ENST00000541645 YEATS2Q9ULM3 1422 aa27.89■■■□□ 2.06
UBC-210ENST00000541645 MBD5Q9P267 1494 aa27.87■■■□□ 2.05
UBC-210ENST00000541645 RSPH4AQ5TD94 716 aa27.86■■■□□ 2.05
UBC-210ENST00000541645 CAMSAP2Q08AD1 1489 aa27.84■■■□□ 2.05
UBC-210ENST00000541645 KDM4FA0A1W2PPD8 638 aa27.83■■■□□ 2.05
UBC-210ENST00000541645 ATP10AO60312 1499 aa27.83■■■□□ 2.04
UBC-210ENST00000541645 HECW2Q9P2P5 1572 aa27.82■■■□□ 2.04
UBC-210ENST00000541645 SPAG9O60271 1321 aaKnown RBP27.81■■■□□ 2.04
UBC-210ENST00000541645 MYT1LQ9UL68 1186 aa27.79■■■□□ 2.04
UBC-210ENST00000541645 C9orf84Q5VXU9 1444 aa27.77■■■□□ 2.04
UBC-210ENST00000541645 CCDC141Q6ZP82 1450 aa27.75■■■□□ 2.03
UBC-210ENST00000541645 RTEL1-TNFRSF6BF6WH68 1400 aa27.75■■■□□ 2.03
UBC-210ENST00000541645 FGD6Q6ZV73 1430 aa27.75■■■□□ 2.03
UBC-210ENST00000541645 ARID4BQ4LE39 1312 aaPredicted RBP27.74■■■□□ 2.03
UBC-210ENST00000541645 ARHGEF5Q12774 1597 aa27.73■■■□□ 2.03
UBC-210ENST00000541645 DIP2CQ9Y2E4 1556 aa27.73■■■□□ 2.03
UBC-210ENST00000541645 REREQ9P2R6 1566 aa27.72■■■□□ 2.03
UBC-210ENST00000541645 KIDINS220Q9ULH0 1771 aa27.71■■■□□ 2.03
UBC-210ENST00000541645 ATP7AQ04656 1500 aa27.71■■■□□ 2.03
UBC-210ENST00000541645 TCOF1Q13428 1488 aaKnown RBP27.7■■■□□ 2.02
UBC-210ENST00000541645 INO80Q9ULG1 1556 aaPredicted RBP27.69■■■□□ 2.02
UBC-210ENST00000541645 TSPY4P0CV99 314 aa27.69■■■□□ 2.02
UBC-210ENST00000541645 TSPY10P0CW01 314 aa27.69■■■□□ 2.02
UBC-210ENST00000541645 ABCA6Q8N139 1617 aa27.69■■■□□ 2.02
UBC-210ENST00000541645 AEBP2Q6ZN18 517 aaPredicted RBP27.67■■■□□ 2.02
UBC-210ENST00000541645 PTPN23Q9H3S7 1636 aa27.66■■■□□ 2.02
UBC-210ENST00000541645 AGLP35573 1532 aa27.64■■■□□ 2.02
UBC-210ENST00000541645 BCORL1Q5H9F3 1711 aa27.62■■■□□ 2.01
UBC-210ENST00000541645 SIGLEC1Q9BZZ2 1709 aa27.62■■■□□ 2.01
UBC-210ENST00000541645 ADAMTSL3P82987 1691 aa27.6■■■□□ 2.01
UBC-210ENST00000541645 A2MP01023 1474 aa27.59■■■□□ 2.01
UBC-210ENST00000541645 PPARGC1BQ86YN6 1023 aaKnown RBP27.59■■■□□ 2.01
UBC-210ENST00000541645 ABCC5O15440 1437 aa27.58■■■□□ 2.01
UBC-210ENST00000541645 MAST1Q9Y2H9 1570 aa27.58■■■□□ 2.01
UBC-210ENST00000541645 DHX29Q7Z478 1369 aaKnown RBP27.56■■■□□ 2
UBC-210ENST00000541645 SHANK2Q9UPX8 1470 aa27.56■■■□□ 2
UBC-210ENST00000541645 PLXNC1O60486 1568 aa27.56■■■□□ 2
UBC-210ENST00000541645 DAPK1P53355 1430 aa27.55■■■□□ 2
UBC-210ENST00000541645 MLECQ14165 292 aa27.54■■■□□ 2
UBC-210ENST00000541645 FAM50AQ14320 339 aaKnown RBP27.53■■■□□ 2
UBC-210ENST00000541645 ADGBQ8N7X0 1667 aa27.52■■■□□ 2
UBC-210ENST00000541645 DNMT1P26358 1616 aaKnown RBP27.52■■■□□ 2
UBC-210ENST00000541645 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.51■■□□□ 1.997e-46■■■□□ 14.9
UBC-210ENST00000541645 PTPRMP28827 1452 aa27.49■■□□□ 1.99
UBC-210ENST00000541645 MADDQ8WXG6 1647 aa27.49■■□□□ 1.99
UBC-210ENST00000541645 PPP6R1Q9UPN7 881 aa27.45■■□□□ 1.98
UBC-210ENST00000541645 CROCC2H7BZ55 1655 aa27.43■■□□□ 1.98
UBC-210ENST00000541645 RRBP1Q9P2E9 1410 aaKnown RBP27.42■■□□□ 1.98
UBC-210ENST00000541645 ANKRD30AQ9BXX3 1397 aa27.42■■□□□ 1.98
UBC-210ENST00000541645 KIF15Q9NS87 1388 aa27.4■■□□□ 1.98
UBC-210ENST00000541645 NCOA1Q15788 1441 aa27.4■■□□□ 1.98
UBC-210ENST00000541645 CNTLNQ9NXG0 1405 aa27.4■■□□□ 1.98
UBC-210ENST00000541645 ADGRL2O95490 1459 aa27.39■■□□□ 1.98
UBC-210ENST00000541645 KIF3BO15066 747 aa27.39■■□□□ 1.98
UBC-210ENST00000541645 ESF1Q9H501 851 aaKnown RBP27.39■■□□□ 1.98
UBC-210ENST00000541645 DUOX2Q9NRD8 1548 aa27.39■■□□□ 1.98
UBC-210ENST00000541645 GGT6Q6P531 493 aa27.38■■□□□ 1.97
UBC-210ENST00000541645 RRP7BPQ9NSQ0 103 aa27.38■■□□□ 1.97
UBC-210ENST00000541645 CHIC2Q9UKJ5 165 aa27.38■■□□□ 1.97
UBC-210ENST00000541645 RIMS1Q86UR5 1692 aaKnown RBP27.37■■□□□ 1.97
UBC-210ENST00000541645 FER1L4A9Z1Z3 1794 aa27.37■■□□□ 1.97
UBC-210ENST00000541645 PTPRKQ15262 1439 aa27.34■■□□□ 1.97
UBC-210ENST00000541645 ERBINQ96RT1 1412 aa27.34■■□□□ 1.97
UBC-210ENST00000541645 ROCK1Q13464 1354 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms