RNA–Protein interactions for RNA: ENST00000541272.1

UBC-209, Transcript of ubiquitin C, humanhuman

TSL 5

Gene UBC, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-209ENST00000541272 EFCAB2Q5VUJ9 269 aa19.71■□□□□ 0.75
UBC-209ENST00000541272 CDK11AQ9UQ88 783 aaPredicted RBP19.71■□□□□ 0.75
UBC-209ENST00000541272 HSPA2P54652 639 aa19.7■□□□□ 0.74
UBC-209ENST00000541272 FER1L4A9Z1Z3 1794 aa19.68■□□□□ 0.74
UBC-209ENST00000541272 FMN1Q68DA7 1419 aa19.67■□□□□ 0.74
UBC-209ENST00000541272 PREX1Q8TCU6 1659 aa19.66■□□□□ 0.74
UBC-209ENST00000541272 ZNF518AQ6AHZ1 1483 aa19.66■□□□□ 0.74
UBC-209ENST00000541272 REREQ9P2R6 1566 aa19.64■□□□□ 0.73
UBC-209ENST00000541272 SIGLEC1Q9BZZ2 1709 aa19.64■□□□□ 0.73
UBC-209ENST00000541272 SETD1BQ9UPS6 1966 aaKnown RBP19.64■□□□□ 0.73
UBC-209ENST00000541272 KDM5CP41229 1560 aa19.61■□□□□ 0.73
UBC-209ENST00000541272 UHRF1BP1Q6BDS2 1440 aa19.6■□□□□ 0.73
UBC-209ENST00000541272 MYO5CQ9NQX4 1742 aa19.6■□□□□ 0.73
UBC-209ENST00000541272 PTPRTO14522 1441 aa19.59■□□□□ 0.73
UBC-209ENST00000541272 MLECQ14165 292 aa19.59■□□□□ 0.73
UBC-209ENST00000541272 CDK13Q14004 1512 aaKnown RBP19.58■□□□□ 0.73
UBC-209ENST00000541272 IQSEC2Q5JU85 1478 aa19.57■□□□□ 0.72
UBC-209ENST00000541272 MLH3Q9UHC1 1453 aa19.57■□□□□ 0.72
UBC-209ENST00000541272 CLIP1P30622 1438 aa19.56■□□□□ 0.72
UBC-209ENST00000541272 TROQ12816 1431 aaPredicted RBP19.56■□□□□ 0.72
UBC-209ENST00000541272 AGLP35573 1532 aa19.56■□□□□ 0.72
UBC-209ENST00000541272 KIF14Q15058 1648 aa19.54■□□□□ 0.72
UBC-209ENST00000541272 RANGAP1P46060 587 aaPredicted RBP19.54■□□□□ 0.72
UBC-209ENST00000541272 STRCQ7RTU9 1775 aa19.52■□□□□ 0.72
UBC-209ENST00000541272 CNTLNQ9NXG0 1405 aa19.52■□□□□ 0.72
UBC-209ENST00000541272 PLPPR3Q6T4P5 718 aa19.52■□□□□ 0.72
UBC-209ENST00000541272 TRAPPC8Q9Y2L5 1435 aa19.51■□□□□ 0.71
UBC-209ENST00000541272 SOCS7O14512 581 aa19.51■□□□□ 0.71
UBC-209ENST00000541272 ARHGAP5Q13017 1502 aa19.5■□□□□ 0.71
UBC-209ENST00000541272 AFAP1Q8N556 730 aa19.49■□□□□ 0.71
UBC-209ENST00000541272 CEBPAP49715 358 aaPredicted RBP19.48■□□□□ 0.71
UBC-209ENST00000541272 ESF1Q9H501 851 aaKnown RBP19.48■□□□□ 0.71
UBC-209ENST00000541272 DIP2CQ9Y2E4 1556 aa19.48■□□□□ 0.71
UBC-209ENST00000541272 ARHGAP35Q9NRY4 1499 aa19.47■□□□□ 0.71
UBC-209ENST00000541272 DISP3Q9P2K9 1392 aa19.46■□□□□ 0.71
UBC-209ENST00000541272 NPATQ14207 1427 aa19.45■□□□□ 0.7
UBC-209ENST00000541272 UBTFP17480 764 aaKnown RBP19.43■□□□□ 0.7
UBC-209ENST00000541272 C3P01024 1663 aa19.43■□□□□ 0.7
UBC-209ENST00000541272 CCDC18Q5T9S5 1454 aa19.42■□□□□ 0.7
UBC-209ENST00000541272 ATP1B4Q9UN42 357 aaPredicted RBP19.42■□□□□ 0.7
UBC-209ENST00000541272 MYT1LQ9UL68 1186 aa19.41■□□□□ 0.7
UBC-209ENST00000541272 NCOA1Q15788 1441 aa19.41■□□□□ 0.7
UBC-209ENST00000541272 ABCC1P33527 1531 aa19.41■□□□□ 0.7
UBC-209ENST00000541272 LTBP4Q8N2S1 1624 aa19.4■□□□□ 0.7
UBC-209ENST00000541272 PREX2Q70Z35 1606 aa19.4■□□□□ 0.7
UBC-209ENST00000541272 ABCA6Q8N139 1617 aa19.4■□□□□ 0.7
UBC-209ENST00000541272 CDC42BPBQ9Y5S2 1711 aa19.39■□□□□ 0.7
UBC-209ENST00000541272 MROH2AA6NES4 1674 aa19.39■□□□□ 0.69
UBC-209ENST00000541272 PPP6R1Q9UPN7 881 aa19.38■□□□□ 0.69
UBC-209ENST00000541272 CASKIN1Q8WXD9 1431 aa19.36■□□□□ 0.69
UBC-209ENST00000541272 ILDR2Q71H61 639 aa19.36■□□□□ 0.69
UBC-209ENST00000541272 PKD2Q13563 968 aa19.35■□□□□ 0.69
UBC-209ENST00000541272 ITSN2Q9NZM3 1697 aa19.34■□□□□ 0.69
UBC-209ENST00000541272 KIDINS220Q9ULH0 1771 aa19.34■□□□□ 0.69
UBC-209ENST00000541272 SPATA31D1Q6ZQQ2 1576 aa19.33■□□□□ 0.69
UBC-209ENST00000541272 PLA2R1Q13018 1463 aa19.33■□□□□ 0.68
UBC-209ENST00000541272 ZMYM3Q14202 1370 aa19.32■□□□□ 0.68
UBC-209ENST00000541272 KIAA1107Q9UPP5 1409 aa19.32■□□□□ 0.68
UBC-209ENST00000541272 PLEKHH2Q8IVE3 1493 aa19.3■□□□□ 0.68
UBC-209ENST00000541272 LRRIQ1Q96JM4 1722 aa19.29■□□□□ 0.68
UBC-209ENST00000541272 CAMSAP1Q5T5Y3 1602 aa19.29■□□□□ 0.68
UBC-209ENST00000541272 SAMD9LQ8IVG5 1584 aa19.28■□□□□ 0.68
UBC-209ENST00000541272 SPAG9O60271 1321 aaKnown RBP19.26■□□□□ 0.67
UBC-209ENST00000541272 FYCO1Q9BQS8 1478 aa19.26■□□□□ 0.67
UBC-209ENST00000541272 CDC42BPAQ5VT25 1732 aa19.25■□□□□ 0.67
UBC-209ENST00000541272 ZNF142P52746 1687 aaPredicted RBP19.25■□□□□ 0.67
UBC-209ENST00000541272 TCOF1Q13428 1488 aaKnown RBP19.24■□□□□ 0.67
UBC-209ENST00000541272 PLXNC1O60486 1568 aa19.23■□□□□ 0.67
UBC-209ENST00000541272 GPATCH8Q9UKJ3 1502 aaKnown RBP19.23■□□□□ 0.67
UBC-209ENST00000541272 A2MP01023 1474 aa19.21■□□□□ 0.67
UBC-209ENST00000541272 ATP7AQ04656 1500 aa19.2■□□□□ 0.66
UBC-209ENST00000541272 PTPRKQ15262 1439 aa19.2■□□□□ 0.66
UBC-209ENST00000541272 FAM135AQ9P2D6 1515 aa19.19■□□□□ 0.66
UBC-209ENST00000541272 SYCP2Q9BX26 1530 aa19.18■□□□□ 0.66
UBC-209ENST00000541272 INO80Q9ULG1 1556 aaPredicted RBP19.18■□□□□ 0.66
UBC-209ENST00000541272 CEP170BQ9Y4F5 1589 aaPredicted RBP19.18■□□□□ 0.66
UBC-209ENST00000541272 UBAP1LF5GYI3 381 aa19.17■□□□□ 0.66
UBC-209ENST00000541272 CFDP1Q9UEE9 299 aaPredicted RBP19.17■□□□□ 0.66
UBC-209ENST00000541272 MYO3AQ8NEV4 1616 aa19.17■□□□□ 0.66
UBC-209ENST00000541272 RTEL1-TNFRSF6BF6WH68 1400 aa19.17■□□□□ 0.66
UBC-209ENST00000541272 ZNF335Q9H4Z2 1342 aaPredicted RBP19.16■□□□□ 0.66
UBC-209ENST00000541272 NCKAP5LQ9HCH0 1330 aa19.16■□□□□ 0.66
UBC-209ENST00000541272 HNRNPMP52272 730 aaKnown RBP eCLIP19.15■□□□□ 0.663e-6■■■□□ 16.5
UBC-209ENST00000541272 ZNF777Q9ULD5 760 aaPredicted RBP19.14■□□□□ 0.65
UBC-209ENST00000541272 A2ML1A8K2U0 1454 aa19.14■□□□□ 0.65
UBC-209ENST00000541272 ADGBQ8N7X0 1667 aa19.14■□□□□ 0.65
UBC-209ENST00000541272 CPS1P31327 1500 aa19.13■□□□□ 0.65
UBC-209ENST00000541272 CLTCQ00610 1675 aaKnown RBP19.13■□□□□ 0.65
UBC-209ENST00000541272 SUPT6HQ7KZ85 1726 aaKnown RBP19.13■□□□□ 0.65
UBC-209ENST00000541272 CCNB3Q8WWL7 1395 aa19.12■□□□□ 0.65
UBC-209ENST00000541272 RSPH4AQ5TD94 716 aa19.12■□□□□ 0.65
UBC-209ENST00000541272 TOM1O60784 492 aa19.11■□□□□ 0.65
UBC-209ENST00000541272 CHIC1Q5VXU3 224 aa19.1■□□□□ 0.65
UBC-209ENST00000541272 GGT6Q6P531 493 aa19.1■□□□□ 0.65
UBC-209ENST00000541272 DHX29Q7Z478 1369 aaKnown RBP19.09■□□□□ 0.65
UBC-209ENST00000541272 DNMT1P26358 1616 aaKnown RBP19.07■□□□□ 0.64
UBC-209ENST00000541272 MBD5Q9P267 1494 aa19.07■□□□□ 0.64
UBC-209ENST00000541272 MTUS2Q5JR59 1369 aa19.06■□□□□ 0.64
UBC-209ENST00000541272 EHMT2Q96KQ7 1210 aa19.05■□□□□ 0.64
UBC-209ENST00000541272 THEMISQ8N1K5 641 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms