RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 POGZQ7Z3K3 1410 aa39.35■■■■□ 3.89
LEMD3-203ENST00000541171 MLECQ14165 292 aa39.34■■■■□ 3.89
LEMD3-203ENST00000541171 MAGI2Q86UL8 1455 aa39.34■■■■□ 3.89
LEMD3-203ENST00000541171 RIMS1Q86UR5 1692 aaKnown RBP39.34■■■■□ 3.89
LEMD3-203ENST00000541171 KIF14Q15058 1648 aa39.32■■■■□ 3.89
LEMD3-203ENST00000541171 TROQ12816 1431 aaPredicted RBP39.31■■■■□ 3.88
LEMD3-203ENST00000541171 MYO5CQ9NQX4 1742 aa39.31■■■■□ 3.88
LEMD3-203ENST00000541171 CLIP1P30622 1438 aa39.27■■■■□ 3.88
LEMD3-203ENST00000541171 SIGLEC1Q9BZZ2 1709 aa39.27■■■■□ 3.88
LEMD3-203ENST00000541171 PCF11O94913 1555 aaKnown RBP39.24■■■■□ 3.87
LEMD3-203ENST00000541171 ARHGAP5Q13017 1502 aa39.22■■■■□ 3.87
LEMD3-203ENST00000541171 LRRIQ1Q96JM4 1722 aa39.22■■■■□ 3.87
LEMD3-203ENST00000541171 LMTK3Q96Q04 1460 aa39.2■■■■□ 3.87
LEMD3-203ENST00000541171 ATP10AO60312 1499 aa39.18■■■■□ 3.86
LEMD3-203ENST00000541171 MYT1LQ9UL68 1186 aa39.18■■■■□ 3.86
LEMD3-203ENST00000541171 AFAP1Q8N556 730 aa39.17■■■■□ 3.86
LEMD3-203ENST00000541171 CASKIN1Q8WXD9 1431 aa39.14■■■■□ 3.86
LEMD3-203ENST00000541171 C9orf84Q5VXU9 1444 aa39.14■■■■□ 3.86
LEMD3-203ENST00000541171 ZNF518AQ6AHZ1 1483 aa39.12■■■■□ 3.85
LEMD3-203ENST00000541171 HSPA2P54652 639 aa39.12■■■■□ 3.85
LEMD3-203ENST00000541171 CCDC18Q5T9S5 1454 aa39.09■■■■□ 3.85
LEMD3-203ENST00000541171 FER1L4A9Z1Z3 1794 aa39.07■■■■□ 3.84
LEMD3-203ENST00000541171 CDC42BPBQ9Y5S2 1711 aa39.03■■■■□ 3.84
LEMD3-203ENST00000541171 KDM5CP41229 1560 aa39.02■■■■□ 3.84
LEMD3-203ENST00000541171 ARHGEF12Q9NZN5 1544 aa39.01■■■■□ 3.84
LEMD3-203ENST00000541171 FBXO41Q8TF61 875 aa39■■■■□ 3.83
LEMD3-203ENST00000541171 CEBPAP49715 358 aaPredicted RBP38.98■■■■□ 3.83
LEMD3-203ENST00000541171 PREX2Q70Z35 1606 aa38.96■■■■□ 3.83
LEMD3-203ENST00000541171 FYCO1Q9BQS8 1478 aa38.96■■■■□ 3.83
LEMD3-203ENST00000541171 TRAPPC8Q9Y2L5 1435 aa38.95■■■■□ 3.83
LEMD3-203ENST00000541171 DIP2CQ9Y2E4 1556 aa38.92■■■■□ 3.82
LEMD3-203ENST00000541171 ABCC1P33527 1531 aa38.91■■■■□ 3.82
LEMD3-203ENST00000541171 ZNF777Q9ULD5 760 aaPredicted RBP38.91■■■■□ 3.82
LEMD3-203ENST00000541171 MLH3Q9UHC1 1453 aa38.9■■■■□ 3.82
LEMD3-203ENST00000541171 ABCA6Q8N139 1617 aa38.86■■■■□ 3.81
LEMD3-203ENST00000541171 ITSN2Q9NZM3 1697 aa38.84■■■■□ 3.81
LEMD3-203ENST00000541171 CDC42BPAQ5VT25 1732 aa38.84■■■■□ 3.81
LEMD3-203ENST00000541171 REREQ9P2R6 1566 aa38.8■■■■□ 3.8
LEMD3-203ENST00000541171 ESF1Q9H501 851 aaKnown RBP38.78■■■■□ 3.8
LEMD3-203ENST00000541171 GPATCH8Q9UKJ3 1502 aaKnown RBP38.76■■■■□ 3.8
LEMD3-203ENST00000541171 HNRNPMP52272 730 aaKnown RBP eCLIP38.75■■■■□ 3.793e-8■■■■■ 32.2
LEMD3-203ENST00000541171 PREX1Q8TCU6 1659 aa38.74■■■■□ 3.79
LEMD3-203ENST00000541171 AGLP35573 1532 aa38.73■■■■□ 3.79
LEMD3-203ENST00000541171 KIDINS220Q9ULH0 1771 aa38.72■■■■□ 3.79
LEMD3-203ENST00000541171 SAMD9LQ8IVG5 1584 aa38.72■■■■□ 3.79
LEMD3-203ENST00000541171 CFDP1Q9UEE9 299 aaPredicted RBP38.71■■■■□ 3.79
LEMD3-203ENST00000541171 SYCP2Q9BX26 1530 aa38.69■■■■□ 3.78
LEMD3-203ENST00000541171 CCNB3Q8WWL7 1395 aa38.69■■■■□ 3.78
LEMD3-203ENST00000541171 SPAG9O60271 1321 aaKnown RBP38.68■■■■□ 3.78
LEMD3-203ENST00000541171 UHRF1BP1Q6BDS2 1440 aa38.68■■■■□ 3.78
LEMD3-203ENST00000541171 MTUS2Q5JR59 1369 aa38.68■■■■□ 3.78
LEMD3-203ENST00000541171 CERKQ8TCT0 537 aa38.63■■■■□ 3.77
LEMD3-203ENST00000541171 C3P01024 1663 aa38.61■■■■□ 3.77
LEMD3-203ENST00000541171 SETD1BQ9UPS6 1966 aaKnown RBP38.61■■■■□ 3.77
LEMD3-203ENST00000541171 KIAA1107Q9UPP5 1409 aa38.57■■■■□ 3.77
LEMD3-203ENST00000541171 PLEKHH2Q8IVE3 1493 aa38.57■■■■□ 3.76
LEMD3-203ENST00000541171 DMRT2Q9Y5R5 561 aa38.55■■■■□ 3.76
LEMD3-203ENST00000541171 CNTLNQ9NXG0 1405 aa38.55■■■■□ 3.76
LEMD3-203ENST00000541171 ATP7AQ04656 1500 aa38.52■■■■□ 3.76
LEMD3-203ENST00000541171 ZNF644Q9H582 1327 aaPredicted RBP38.51■■■■□ 3.76
LEMD3-203ENST00000541171 CEP162Q5TB80 1403 aa38.51■■■■□ 3.76
LEMD3-203ENST00000541171 STRCQ7RTU9 1775 aa38.5■■■■□ 3.75
LEMD3-203ENST00000541171 SUPT6HQ7KZ85 1726 aaKnown RBP38.49■■■■□ 3.75
LEMD3-203ENST00000541171 EHBP1L1Q8N3D4 1523 aa38.45■■■■□ 3.75
LEMD3-203ENST00000541171 A2MP01023 1474 aa38.45■■■■□ 3.75
LEMD3-203ENST00000541171 TIAM1Q13009 1591 aa38.44■■■■□ 3.74
LEMD3-203ENST00000541171 INO80Q9ULG1 1556 aaPredicted RBP38.44■■■■□ 3.74
LEMD3-203ENST00000541171 ZMYM3Q14202 1370 aa38.44■■■■□ 3.74
LEMD3-203ENST00000541171 GGT6Q6P531 493 aa38.43■■■■□ 3.74
LEMD3-203ENST00000541171 PLXNC1O60486 1568 aa38.36■■■■□ 3.73
LEMD3-203ENST00000541171 MROH2AA6NES4 1674 aa38.36■■■■□ 3.73
LEMD3-203ENST00000541171 MBD5Q9P267 1494 aa38.35■■■■□ 3.73
LEMD3-203ENST00000541171 PTPRTO14522 1441 aa38.34■■■■□ 3.73
LEMD3-203ENST00000541171 NPATQ14207 1427 aa38.34■■■■□ 3.73
LEMD3-203ENST00000541171 CLTCQ00610 1675 aaKnown RBP38.32■■■■□ 3.72
LEMD3-203ENST00000541171 NCOA1Q15788 1441 aa38.29■■■■□ 3.72
LEMD3-203ENST00000541171 ADGBQ8N7X0 1667 aa38.27■■■■□ 3.72
LEMD3-203ENST00000541171 NCOA2Q15596 1464 aa38.26■■■■□ 3.72
LEMD3-203ENST00000541171 RTEL1-TNFRSF6BF6WH68 1400 aa38.24■■■■□ 3.71
LEMD3-203ENST00000541171 LOC105371045A0A1W2PR82 267 aa38.24■■■■□ 3.71
LEMD3-203ENST00000541171 CAMSAP1Q5T5Y3 1602 aa38.23■■■■□ 3.71
LEMD3-203ENST00000541171 PPP6R1Q9UPN7 881 aa38.22■■■■□ 3.71
LEMD3-203ENST00000541171 PTPRKQ15262 1439 aa38.21■■■■□ 3.71
LEMD3-203ENST00000541171 DHX29Q7Z478 1369 aaKnown RBP38.2■■■■□ 3.71
LEMD3-203ENST00000541171 NCKAP5LQ9HCH0 1330 aa38.2■■■■□ 3.71
LEMD3-203ENST00000541171 CAMSAP2Q08AD1 1489 aa38.18■■■■□ 3.7
LEMD3-203ENST00000541171 CCDC141Q6ZP82 1450 aa38.17■■■■□ 3.7
LEMD3-203ENST00000541171 KIF3BO15066 747 aa38.16■■■■□ 3.7
LEMD3-203ENST00000541171 RSPH4AQ5TD94 716 aa38.14■■■■□ 3.7
LEMD3-203ENST00000541171 MYO3AQ8NEV4 1616 aa38.12■■■■□ 3.69
LEMD3-203ENST00000541171 VPS8Q8N3P4 1428 aa38.1■■■■□ 3.69
LEMD3-203ENST00000541171 LTBP4Q8N2S1 1624 aa38.09■■■■□ 3.69
LEMD3-203ENST00000541171 CEP170BQ9Y4F5 1589 aaPredicted RBP38.08■■■■□ 3.69
LEMD3-203ENST00000541171 TSPY4P0CV99 314 aa38.07■■■■□ 3.68
LEMD3-203ENST00000541171 TSPY10P0CW01 314 aa38.07■■■■□ 3.68
LEMD3-203ENST00000541171 ZNF142P52746 1687 aaPredicted RBP38.05■■■■□ 3.68
LEMD3-203ENST00000541171 PKD2Q13563 968 aa38.05■■■■□ 3.68
LEMD3-203ENST00000541171 LRRC9Q6ZRR7 1453 aa38.04■■■■□ 3.68
LEMD3-203ENST00000541171 FBXO31Q5XUX0 539 aaPredicted RBP38.03■■■■□ 3.68
LEMD3-203ENST00000541171 PLA2R1Q13018 1463 aa38.02■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms