RNA–Protein interactions for RNA: ENST00000541167.5

RAP1B-223, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-223	ENST00000541167	ADGRL1	O94910	1474 aa		31.73	■■■□□ 2.67
RAP1B-223	ENST00000541167	EFCAB2	Q5VUJ9	269 aa		31.73	■■■□□ 2.67
RAP1B-223	ENST00000541167	DENND4B	O75064	1496 aa	Predicted RBP	31.72	■■■□□ 2.67
RAP1B-223	ENST00000541167	RICTOR	Q6R327	1708 aa		31.72	■■■□□ 2.67
RAP1B-223	ENST00000541167	RAPGEF3	O95398	923 aa		31.71	■■■□□ 2.67
RAP1B-223	ENST00000541167	SUPT6H	Q7KZ85	1726 aa	Known RBP	31.68	■■■□□ 2.66
RAP1B-223	ENST00000541167	MAP3K1	Q13233	1512 aa		31.68	■■■□□ 2.66
RAP1B-223	ENST00000541167	SCAPER	Q9BY12	1400 aa		31.66	■■■□□ 2.66
RAP1B-223	ENST00000541167	GPATCH8	Q9UKJ3	1502 aa	Known RBP	31.65	■■■□□ 2.66
RAP1B-223	ENST00000541167	CCNB3	Q8WWL7	1395 aa		31.64	■■■□□ 2.66
RAP1B-223	ENST00000541167	LRRC9	Q6ZRR7	1453 aa		31.63	■■■□□ 2.65
RAP1B-223	ENST00000541167	ITSN2	Q9NZM3	1697 aa		31.63	■■■□□ 2.65
RAP1B-223	ENST00000541167	POGZ	Q7Z3K3	1410 aa		31.6	■■■□□ 2.65
RAP1B-223	ENST00000541167	ABCC1	P33527	1531 aa		31.59	■■■□□ 2.65
RAP1B-223	ENST00000541167	ZMYM4	Q5VZL5	1548 aa		31.59	■■■□□ 2.65
RAP1B-223	ENST00000541167	NCOA2	Q15596	1464 aa		31.59	■■■□□ 2.65
RAP1B-223	ENST00000541167	APLP2	Q06481	763 aa		31.58	■■■□□ 2.65
RAP1B-223	ENST00000541167	SAMD9L	Q8IVG5	1584 aa		31.56	■■■□□ 2.64
RAP1B-223	ENST00000541167	ZNF777	Q9ULD5	760 aa	Predicted RBP	31.54	■■■□□ 2.64
RAP1B-223	ENST00000541167	ARHGEF40	Q8TER5	1519 aa		31.54	■■■□□ 2.64
RAP1B-223	ENST00000541167	CFDP1	Q9UEE9	299 aa	Predicted RBP	31.53	■■■□□ 2.64
RAP1B-223	ENST00000541167	KANK4	Q5T7N3	995 aa	Predicted RBP	31.52	■■■□□ 2.64
RAP1B-223	ENST00000541167	ZNF518A	Q6AHZ1	1483 aa		31.52	■■■□□ 2.64
RAP1B-223	ENST00000541167	KDM4F	A0A1W2PPD8	638 aa		31.51	■■■□□ 2.63
RAP1B-223	ENST00000541167	ZFYVE16	Q7Z3T8	1539 aa		31.5	■■■□□ 2.63
RAP1B-223	ENST00000541167	ARHGEF12	Q9NZN5	1544 aa		31.49	■■■□□ 2.63
RAP1B-223	ENST00000541167	KDM5C	P41229	1560 aa		31.48	■■■□□ 2.63
RAP1B-223	ENST00000541167	SYCP2	Q9BX26	1530 aa		31.48	■■■□□ 2.63
RAP1B-223	ENST00000541167	MAGI2	Q86UL8	1455 aa		31.47	■■■□□ 2.63
RAP1B-223	ENST00000541167	PLEKHH2	Q8IVE3	1493 aa		31.45	■■■□□ 2.62
RAP1B-223	ENST00000541167	TRAPPC8	Q9Y2L5	1435 aa		31.44	■■■□□ 2.62
RAP1B-223	ENST00000541167	HECW2	Q9P2P5	1572 aa		31.43	■■■□□ 2.62
RAP1B-223	ENST00000541167	YEATS2	Q9ULM3	1422 aa		31.43	■■■□□ 2.62
RAP1B-223	ENST00000541167	AFAP1	Q8N556	730 aa		31.43	■■■□□ 2.62
RAP1B-223	ENST00000541167	ILDR1	Q86SU0	546 aa	Predicted RBP	31.4	■■■□□ 2.62
RAP1B-223	ENST00000541167	KIAA1107	Q9UPP5	1409 aa		31.4	■■■□□ 2.62
RAP1B-223	ENST00000541167	MYT1L	Q9UL68	1186 aa		31.37	■■■□□ 2.61
RAP1B-223	ENST00000541167	ZNF644	Q9H582	1327 aa	Predicted RBP	31.36	■■■□□ 2.61
RAP1B-223	ENST00000541167	HNRNPM	P52272	730 aa	Known RBP eCLIP	31.36	■■■□□ 2.61
RAP1B-223	ENST00000541167	CAMSAP2	Q08AD1	1489 aa		31.34	■■■□□ 2.61
RAP1B-223	ENST00000541167	MLH3	Q9UHC1	1453 aa		31.34	■■■□□ 2.61
RAP1B-223	ENST00000541167	MYOM3	Q5VTT5	1437 aa		31.32	■■■□□ 2.61
RAP1B-223	ENST00000541167	ABCA6	Q8N139	1617 aa		31.31	■■■□□ 2.6
RAP1B-223	ENST00000541167	DIP2C	Q9Y2E4	1556 aa		31.31	■■■□□ 2.6
RAP1B-223	ENST00000541167	KIDINS220	Q9ULH0	1771 aa		31.31	■■■□□ 2.6
RAP1B-223	ENST00000541167	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.3	■■■□□ 2.6
RAP1B-223	ENST00000541167	SIGLEC1	Q9BZZ2	1709 aa		31.3	■■■□□ 2.6
RAP1B-223	ENST00000541167	ATP10A	O60312	1499 aa		31.3	■■■□□ 2.6
RAP1B-223	ENST00000541167	C9orf84	Q5VXU9	1444 aa		31.29	■■■□□ 2.6
RAP1B-223	ENST00000541167	BCORL1	Q5H9F3	1711 aa		31.28	■■■□□ 2.6
RAP1B-223	ENST00000541167	MBD5	Q9P267	1494 aa		31.27	■■■□□ 2.6
RAP1B-223	ENST00000541167	INO80	Q9ULG1	1556 aa	Predicted RBP	31.26	■■■□□ 2.59
RAP1B-223	ENST00000541167	SPAG9	O60271	1321 aa	Known RBP	31.25	■■■□□ 2.59
RAP1B-223	ENST00000541167	MIA2	Q96PC5	1412 aa		31.25	■■■□□ 2.59
RAP1B-223	ENST00000541167	ATP7A	Q04656	1500 aa		31.24	■■■□□ 2.59
RAP1B-223	ENST00000541167	ADAMTSL3	P82987	1691 aa		31.22	■■■□□ 2.59
RAP1B-223	ENST00000541167	CCDC141	Q6ZP82	1450 aa		31.21	■■■□□ 2.59
RAP1B-223	ENST00000541167	ARHGEF5	Q12774	1597 aa		31.21	■■■□□ 2.59
RAP1B-223	ENST00000541167	RERE	Q9P2R6	1566 aa		31.21	■■■□□ 2.59
RAP1B-223	ENST00000541167	PTPN23	Q9H3S7	1636 aa		31.18	■■■□□ 2.58
RAP1B-223	ENST00000541167	MADD	Q8WXG6	1647 aa		31.15	■■■□□ 2.58
RAP1B-223	ENST00000541167	FGD6	Q6ZV73	1430 aa		31.15	■■■□□ 2.58
RAP1B-223	ENST00000541167	RSPH4A	Q5TD94	716 aa		31.13	■■■□□ 2.57
RAP1B-223	ENST00000541167	ADGB	Q8N7X0	1667 aa		31.12	■■■□□ 2.57
RAP1B-223	ENST00000541167	RTEL1-TNFRSF6B	F6WH68	1400 aa		31.1	■■■□□ 2.57
RAP1B-223	ENST00000541167	MLEC	Q14165	292 aa		31.1	■■■□□ 2.57
RAP1B-223	ENST00000541167	FER1L4	A9Z1Z3	1794 aa		31.09	■■■□□ 2.57
RAP1B-223	ENST00000541167	RIMS1	Q86UR5	1692 aa	Known RBP	31.09	■■■□□ 2.57
RAP1B-223	ENST00000541167	AGL	P35573	1532 aa		31.08	■■■□□ 2.57
RAP1B-223	ENST00000541167	TCOF1	Q13428	1488 aa	Known RBP	31.07	■■■□□ 2.56
RAP1B-223	ENST00000541167	A2M	P01023	1474 aa		31.06	■■■□□ 2.56
RAP1B-223	ENST00000541167	PPARGC1B	Q86YN6	1023 aa	Known RBP	31.05	■■■□□ 2.56
RAP1B-223	ENST00000541167	PLXNC1	O60486	1568 aa		31.05	■■■□□ 2.56
RAP1B-223	ENST00000541167	MAST1	Q9Y2H9	1570 aa		31.05	■■■□□ 2.56
RAP1B-223	ENST00000541167	CROCC2	H7BZ55	1655 aa		31.04	■■■□□ 2.56
RAP1B-223	ENST00000541167	TSPY4	P0CV99	314 aa		31.04	■■■□□ 2.56
RAP1B-223	ENST00000541167	TSPY10	P0CW01	314 aa		31.04	■■■□□ 2.56
RAP1B-223	ENST00000541167	DNMT1	P26358	1616 aa	Known RBP	31.02	■■■□□ 2.56
RAP1B-223	ENST00000541167	PTPRM	P28827	1452 aa		31.01	■■■□□ 2.56
RAP1B-223	ENST00000541167	ABCC5	O15440	1437 aa		30.96	■■■□□ 2.55
RAP1B-223	ENST00000541167	DAPK1	P53355	1430 aa		30.95	■■■□□ 2.54
RAP1B-223	ENST00000541167	SHANK2	Q9UPX8	1470 aa		30.95	■■■□□ 2.54
RAP1B-223	ENST00000541167	FAM50A	Q14320	339 aa	Known RBP	30.93	■■■□□ 2.54
RAP1B-223	ENST00000541167	DHX29	Q7Z478	1369 aa	Known RBP	30.92	■■■□□ 2.54
RAP1B-223	ENST00000541167	PLPPR3	Q6T4P5	718 aa		30.86	■■■□□ 2.53
RAP1B-223	ENST00000541167	ESF1	Q9H501	851 aa	Known RBP	30.85	■■■□□ 2.53
RAP1B-223	ENST00000541167	GGT6	Q6P531	493 aa		30.81	■■■□□ 2.52
RAP1B-223	ENST00000541167	DUOX2	Q9NRD8	1548 aa		30.81	■■■□□ 2.52
RAP1B-223	ENST00000541167	CLTC	Q00610	1675 aa	Known RBP	30.81	■■■□□ 2.52
RAP1B-223	ENST00000541167	KIF3B	O15066	747 aa		30.8	■■■□□ 2.52
RAP1B-223	ENST00000541167	CNTLN	Q9NXG0	1405 aa		30.8	■■■□□ 2.52
RAP1B-223	ENST00000541167	EIF2AK4	Q9P2K8	1649 aa	Known RBP	30.8	■■■□□ 2.52
RAP1B-223	ENST00000541167	MROH2A	A6NES4	1674 aa		30.79	■■■□□ 2.52
RAP1B-223	ENST00000541167	C3	P01024	1663 aa		30.79	■■■□□ 2.52
RAP1B-223	ENST00000541167	KIF15	Q9NS87	1388 aa		30.79	■■■□□ 2.52
RAP1B-223	ENST00000541167	CHIC2	Q9UKJ5	165 aa		30.78	■■■□□ 2.52
RAP1B-223	ENST00000541167	ANKRD30A	Q9BXX3	1397 aa		30.76	■■■□□ 2.51
RAP1B-223	ENST00000541167	RRP7BP	Q9NSQ0	103 aa		30.75	■■■□□ 2.51
RAP1B-223	ENST00000541167	ADGRL2	O95490	1459 aa		30.74	■■■□□ 2.51
RAP1B-223	ENST00000541167	RNF17	Q9BXT8	1623 aa	Known RBP	30.73	■■■□□ 2.51

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms