RNA–Protein interactions for RNA: ENST00000541099.5

TRIT1-215, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRIT1, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-215ENST00000541099 RAPGEF3O95398 923 aa18.46■□□□□ 0.55
TRIT1-215ENST00000541099 PHLDB1Q86UU1 1377 aa18.45■□□□□ 0.54
TRIT1-215ENST00000541099 MYO5CQ9NQX4 1742 aa18.45■□□□□ 0.54
TRIT1-215ENST00000541099 CDC42BPBQ9Y5S2 1711 aa18.45■□□□□ 0.54
TRIT1-215ENST00000541099 NCOA2Q15596 1464 aa18.45■□□□□ 0.54
TRIT1-215ENST00000541099 EFCAB2Q5VUJ9 269 aa18.44■□□□□ 0.54
TRIT1-215ENST00000541099 CDC42BPAQ5VT25 1732 aa18.43■□□□□ 0.54
TRIT1-215ENST00000541099 FRMPD1Q5SYB0 1578 aa18.43■□□□□ 0.54
TRIT1-215ENST00000541099 PREX2Q70Z35 1606 aa18.43■□□□□ 0.54
TRIT1-215ENST00000541099 ARHGAP5Q13017 1502 aa18.43■□□□□ 0.54
TRIT1-215ENST00000541099 ARHGEF12Q9NZN5 1544 aa18.41■□□□□ 0.54
TRIT1-215ENST00000541099 CCNB3Q8WWL7 1395 aa18.41■□□□□ 0.54
TRIT1-215ENST00000541099 SCAPERQ9BY12 1400 aa18.4■□□□□ 0.54
TRIT1-215ENST00000541099 ADGRL1O94910 1474 aa18.4■□□□□ 0.54
TRIT1-215ENST00000541099 DENND4BO75064 1496 aaPredicted RBP18.39■□□□□ 0.53
TRIT1-215ENST00000541099 CFAP74Q9C0B2 1584 aa18.38■□□□□ 0.53
TRIT1-215ENST00000541099 ZNF644Q9H582 1327 aaPredicted RBP18.38■□□□□ 0.53
TRIT1-215ENST00000541099 SAMD9LQ8IVG5 1584 aa18.37■□□□□ 0.53
TRIT1-215ENST00000541099 SUPT6HQ7KZ85 1726 aaKnown RBP18.37■□□□□ 0.53
TRIT1-215ENST00000541099 ABCC1P33527 1531 aa18.36■□□□□ 0.53
TRIT1-215ENST00000541099 RICTORQ6R327 1708 aa18.36■□□□□ 0.53
TRIT1-215ENST00000541099 POGZQ7Z3K3 1410 aa18.36■□□□□ 0.53
TRIT1-215ENST00000541099 CFDP1Q9UEE9 299 aaPredicted RBP18.36■□□□□ 0.53
TRIT1-215ENST00000541099 TRAPPC8Q9Y2L5 1435 aa18.36■□□□□ 0.53
TRIT1-215ENST00000541099 APLP2Q06481 763 aa18.35■□□□□ 0.53
TRIT1-215ENST00000541099 ZNF777Q9ULD5 760 aaPredicted RBP18.35■□□□□ 0.53
TRIT1-215ENST00000541099 AFAP1Q8N556 730 aa18.34■□□□□ 0.53
TRIT1-215ENST00000541099 HNRNPMP52272 730 aaKnown RBP eCLIP18.32■□□□□ 0.52
TRIT1-215ENST00000541099 PPARGC1BQ86YN6 1023 aaKnown RBP18.31■□□□□ 0.52
TRIT1-215ENST00000541099 YEATS2Q9ULM3 1422 aa18.31■□□□□ 0.52
TRIT1-215ENST00000541099 ZMYM4Q5VZL5 1548 aa18.3■□□□□ 0.52
TRIT1-215ENST00000541099 SYCP2Q9BX26 1530 aa18.3■□□□□ 0.52
TRIT1-215ENST00000541099 MBD5Q9P267 1494 aa18.29■□□□□ 0.52
TRIT1-215ENST00000541099 KIAA1107Q9UPP5 1409 aa18.29■□□□□ 0.52
TRIT1-215ENST00000541099 ITSN2Q9NZM3 1697 aa18.28■□□□□ 0.52
TRIT1-215ENST00000541099 MYOM3Q5VTT5 1437 aa18.28■□□□□ 0.52
TRIT1-215ENST00000541099 KDM5CP41229 1560 aa18.28■□□□□ 0.52
TRIT1-215ENST00000541099 ZNF518AQ6AHZ1 1483 aa18.26■□□□□ 0.51
TRIT1-215ENST00000541099 CAMSAP2Q08AD1 1489 aa18.26■□□□□ 0.51
TRIT1-215ENST00000541099 PLEKHH2Q8IVE3 1493 aa18.24■□□□□ 0.51
TRIT1-215ENST00000541099 MIA2Q96PC5 1412 aa18.23■□□□□ 0.51
TRIT1-215ENST00000541099 ARHGEF40Q8TER5 1519 aa18.23■□□□□ 0.51
TRIT1-215ENST00000541099 MAGI2Q86UL8 1455 aa18.22■□□□□ 0.51
TRIT1-215ENST00000541099 MLH3Q9UHC1 1453 aa18.22■□□□□ 0.51
TRIT1-215ENST00000541099 KDM4FA0A1W2PPD8 638 aa18.22■□□□□ 0.51
TRIT1-215ENST00000541099 ZFYVE16Q7Z3T8 1539 aa18.22■□□□□ 0.51
TRIT1-215ENST00000541099 FGD6Q6ZV73 1430 aa18.21■□□□□ 0.51
TRIT1-215ENST00000541099 SIGLEC1Q9BZZ2 1709 aa18.2■□□□□ 0.5
TRIT1-215ENST00000541099 HECW2Q9P2P5 1572 aa18.18■□□□□ 0.5
TRIT1-215ENST00000541099 KIDINS220Q9ULH0 1771 aa18.18■□□□□ 0.5
TRIT1-215ENST00000541099 DIP2CQ9Y2E4 1556 aa18.17■□□□□ 0.5
TRIT1-215ENST00000541099 TCOF1Q13428 1488 aaKnown RBP18.17■□□□□ 0.5
TRIT1-215ENST00000541099 SPAG9O60271 1321 aaKnown RBP18.17■□□□□ 0.5
TRIT1-215ENST00000541099 ABCA6Q8N139 1617 aa18.16■□□□□ 0.5
TRIT1-215ENST00000541099 ATP10AO60312 1499 aa18.16■□□□□ 0.5
TRIT1-215ENST00000541099 PTPN23Q9H3S7 1636 aa18.16■□□□□ 0.5
TRIT1-215ENST00000541099 CCDC141Q6ZP82 1450 aa18.15■□□□□ 0.5
TRIT1-215ENST00000541099 ARHGEF5Q12774 1597 aa18.15■□□□□ 0.5
TRIT1-215ENST00000541099 INO80Q9ULG1 1556 aaPredicted RBP18.14■□□□□ 0.49
TRIT1-215ENST00000541099 ABCC5O15440 1437 aa18.13■□□□□ 0.49
TRIT1-215ENST00000541099 C9orf84Q5VXU9 1444 aa18.13■□□□□ 0.49
TRIT1-215ENST00000541099 ATP7AQ04656 1500 aa18.13■□□□□ 0.49
TRIT1-215ENST00000541099 MYT1LQ9UL68 1186 aa18.11■□□□□ 0.49
TRIT1-215ENST00000541099 RTEL1-TNFRSF6BF6WH68 1400 aa18.1■□□□□ 0.49
TRIT1-215ENST00000541099 RSPH4AQ5TD94 716 aa18.1■□□□□ 0.49
TRIT1-215ENST00000541099 REREQ9P2R6 1566 aa18.08■□□□□ 0.48
TRIT1-215ENST00000541099 DAPK1P53355 1430 aa18.07■□□□□ 0.48
TRIT1-215ENST00000541099 ARID4BQ4LE39 1312 aaPredicted RBP18.07■□□□□ 0.48
TRIT1-215ENST00000541099 PTPRKQ15262 1439 aa18.06■□□□□ 0.48
TRIT1-215ENST00000541099 FAM50AQ14320 339 aaKnown RBP18.06■□□□□ 0.48
TRIT1-215ENST00000541099 MAST1Q9Y2H9 1570 aa18.05■□□□□ 0.48
TRIT1-215ENST00000541099 BCORL1Q5H9F3 1711 aa18.05■□□□□ 0.48
TRIT1-215ENST00000541099 A2MP01023 1474 aa18.05■□□□□ 0.48
TRIT1-215ENST00000541099 DNMT1P26358 1616 aaKnown RBP18.05■□□□□ 0.48
TRIT1-215ENST00000541099 PLXNC1O60486 1568 aa18.04■□□□□ 0.48
TRIT1-215ENST00000541099 ADAMTSL3P82987 1691 aa18.04■□□□□ 0.48
TRIT1-215ENST00000541099 TSPY4P0CV99 314 aa18.04■□□□□ 0.48
TRIT1-215ENST00000541099 TSPY10P0CW01 314 aa18.04■□□□□ 0.48
TRIT1-215ENST00000541099 MLECQ14165 292 aa18.04■□□□□ 0.48
TRIT1-215ENST00000541099 AGLP35573 1532 aa18.03■□□□□ 0.48
TRIT1-215ENST00000541099 RRBP1Q9P2E9 1410 aaKnown RBP18.03■□□□□ 0.48
TRIT1-215ENST00000541099 DHX29Q7Z478 1369 aaKnown RBP18.02■□□□□ 0.47
TRIT1-215ENST00000541099 SHANK2Q9UPX8 1470 aa18.01■□□□□ 0.47
TRIT1-215ENST00000541099 CHIC2Q9UKJ5 165 aa18.01■□□□□ 0.47
TRIT1-215ENST00000541099 CROCC2H7BZ55 1655 aa18■□□□□ 0.47
TRIT1-215ENST00000541099 ADGBQ8N7X0 1667 aa18■□□□□ 0.47
TRIT1-215ENST00000541099 MADDQ8WXG6 1647 aa17.99■□□□□ 0.47
TRIT1-215ENST00000541099 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.98■□□□□ 0.473e-6■□□□□ 10.4
TRIT1-215ENST00000541099 RRP7BPQ9NSQ0 103 aa17.97■□□□□ 0.47
TRIT1-215ENST00000541099 NCOA1Q15788 1441 aa17.96■□□□□ 0.47
TRIT1-215ENST00000541099 ADGRL2O95490 1459 aa17.95■□□□□ 0.46
TRIT1-215ENST00000541099 PTPRMP28827 1452 aa17.95■□□□□ 0.46
TRIT1-215ENST00000541099 KIF15Q9NS87 1388 aa17.94■□□□□ 0.46
TRIT1-215ENST00000541099 KIF3BO15066 747 aa17.92■□□□□ 0.46
TRIT1-215ENST00000541099 ITGAEP38570 1179 aa17.92■□□□□ 0.46
TRIT1-215ENST00000541099 RIMS1Q86UR5 1692 aaKnown RBP17.91■□□□□ 0.46
TRIT1-215ENST00000541099 GGT6Q6P531 493 aa17.91■□□□□ 0.46
TRIT1-215ENST00000541099 ANKRD30AQ9BXX3 1397 aa17.91■□□□□ 0.46
TRIT1-215ENST00000541099 DUOX2Q9NRD8 1548 aa17.9■□□□□ 0.46
TRIT1-215ENST00000541099 CEBPAP49715 358 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms