RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 ARAP3Q8WWN8 1544 aa24.05■■□□□ 1.44
DDB1-218ENST00000540784 SUPT6HQ7KZ85 1726 aaKnown RBP24.05■■□□□ 1.44
DDB1-218ENST00000540784 MYO5CQ9NQX4 1742 aa24.05■■□□□ 1.44
DDB1-218ENST00000540784 PPARGC1BQ86YN6 1023 aaKnown RBP24.04■■□□□ 1.44
DDB1-218ENST00000540784 COL17A1Q9UMD9 1497 aaPredicted RBP24.02■■□□□ 1.44
DDB1-218ENST00000540784 KDM6BO15054 1643 aa24.02■■□□□ 1.44
DDB1-218ENST00000540784 RAPGEF3O95398 923 aa24■■□□□ 1.43
DDB1-218ENST00000540784 CFAP74Q9C0B2 1584 aa23.99■■□□□ 1.43
DDB1-218ENST00000540784 SCAPERQ9BY12 1400 aa23.99■■□□□ 1.43
DDB1-218ENST00000540784 PREX2Q70Z35 1606 aa23.98■■□□□ 1.43
DDB1-218ENST00000540784 CDC42BPAQ5VT25 1732 aa23.98■■□□□ 1.43
DDB1-218ENST00000540784 CDC42BPBQ9Y5S2 1711 aa23.98■■□□□ 1.43
DDB1-218ENST00000540784 ADGRL1O94910 1474 aa23.97■■□□□ 1.43
DDB1-218ENST00000540784 DENND4BO75064 1496 aaPredicted RBP23.95■■□□□ 1.42
DDB1-218ENST00000540784 ZNF644Q9H582 1327 aaPredicted RBP23.94■■□□□ 1.42
DDB1-218ENST00000540784 HNRNPMP52272 730 aaKnown RBP eCLIP23.94■■□□□ 1.42
DDB1-218ENST00000540784 MYOM3Q5VTT5 1437 aa23.92■■□□□ 1.42
DDB1-218ENST00000540784 AFAP1Q8N556 730 aa23.91■■□□□ 1.42
DDB1-218ENST00000540784 ITSN2Q9NZM3 1697 aa23.9■■□□□ 1.42
DDB1-218ENST00000540784 PLEKHH2Q8IVE3 1493 aa23.89■■□□□ 1.42
DDB1-218ENST00000540784 MIA2Q96PC5 1412 aa23.88■■□□□ 1.41
DDB1-218ENST00000540784 KIAA1107Q9UPP5 1409 aa23.88■■□□□ 1.41
DDB1-218ENST00000540784 MYT1LQ9UL68 1186 aa23.86■■□□□ 1.41
DDB1-218ENST00000540784 SAMD9LQ8IVG5 1584 aa23.86■■□□□ 1.41
DDB1-218ENST00000540784 ARHGEF12Q9NZN5 1544 aa23.85■■□□□ 1.41
DDB1-218ENST00000540784 RSPH4AQ5TD94 716 aa23.85■■□□□ 1.41
DDB1-218ENST00000540784 POGZQ7Z3K3 1410 aa23.84■■□□□ 1.41
DDB1-218ENST00000540784 ABCC1P33527 1531 aa23.84■■□□□ 1.41
DDB1-218ENST00000540784 TRAPPC8Q9Y2L5 1435 aa23.84■■□□□ 1.41
DDB1-218ENST00000540784 ZNF518AQ6AHZ1 1483 aa23.81■■□□□ 1.4
DDB1-218ENST00000540784 CAMSAP2Q08AD1 1489 aa23.81■■□□□ 1.4
DDB1-218ENST00000540784 FGD6Q6ZV73 1430 aa23.8■■□□□ 1.4
DDB1-218ENST00000540784 SPAG9O60271 1321 aaKnown RBP23.79■■□□□ 1.4
DDB1-218ENST00000540784 SYCP2Q9BX26 1530 aa23.79■■□□□ 1.4
DDB1-218ENST00000540784 RICTORQ6R327 1708 aa23.79■■□□□ 1.4
DDB1-218ENST00000540784 FAM50AQ14320 339 aaKnown RBP23.78■■□□□ 1.4
DDB1-218ENST00000540784 FRMPD1Q5SYB0 1578 aa23.78■■□□□ 1.4
DDB1-218ENST00000540784 MBD5Q9P267 1494 aa23.77■■□□□ 1.4
DDB1-218ENST00000540784 TSPY4P0CV99 314 aa23.77■■□□□ 1.4
DDB1-218ENST00000540784 TSPY10P0CW01 314 aa23.77■■□□□ 1.4
DDB1-218ENST00000540784 MAGI2Q86UL8 1455 aa23.76■■□□□ 1.39
DDB1-218ENST00000540784 PTPN23Q9H3S7 1636 aa23.73■■□□□ 1.39
DDB1-218ENST00000540784 MLH3Q9UHC1 1453 aa23.72■■□□□ 1.39
DDB1-218ENST00000540784 ZMYM4Q5VZL5 1548 aa23.72■■□□□ 1.39
DDB1-218ENST00000540784 KDM5CP41229 1560 aa23.7■■□□□ 1.38
DDB1-218ENST00000540784 TCOF1Q13428 1488 aaKnown RBP23.7■■□□□ 1.38
DDB1-218ENST00000540784 CCDC141Q6ZP82 1450 aa23.69■■□□□ 1.38
DDB1-218ENST00000540784 YEATS2Q9ULM3 1422 aa23.69■■□□□ 1.38
DDB1-218ENST00000540784 ZFYVE16Q7Z3T8 1539 aa23.68■■□□□ 1.38
DDB1-218ENST00000540784 ARHGEF5Q12774 1597 aa23.67■■□□□ 1.38
DDB1-218ENST00000540784 ARID4BQ4LE39 1312 aaPredicted RBP23.65■■□□□ 1.38
DDB1-218ENST00000540784 ATP10AO60312 1499 aa23.65■■□□□ 1.38
DDB1-218ENST00000540784 RTEL1-TNFRSF6BF6WH68 1400 aa23.65■■□□□ 1.38
DDB1-218ENST00000540784 ABCC5O15440 1437 aa23.64■■□□□ 1.37
DDB1-218ENST00000540784 HECW2Q9P2P5 1572 aa23.64■■□□□ 1.37
DDB1-218ENST00000540784 CHIC2Q9UKJ5 165 aa23.61■■□□□ 1.37
DDB1-218ENST00000540784 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.61■■□□□ 1.37
DDB1-218ENST00000540784 DAPK1P53355 1430 aa23.6■■□□□ 1.37
DDB1-218ENST00000540784 ARHGEF40Q8TER5 1519 aa23.6■■□□□ 1.37
DDB1-218ENST00000540784 ITGAEP38570 1179 aa23.6■■□□□ 1.37
DDB1-218ENST00000540784 RRBP1Q9P2E9 1410 aaKnown RBP23.59■■□□□ 1.37
DDB1-218ENST00000540784 ATP7AQ04656 1500 aa23.59■■□□□ 1.37
DDB1-218ENST00000540784 KIDINS220Q9ULH0 1771 aa23.59■■□□□ 1.37
DDB1-218ENST00000540784 C9orf84Q5VXU9 1444 aa23.59■■□□□ 1.37
DDB1-218ENST00000540784 RRP7BPQ9NSQ0 103 aa23.55■■□□□ 1.36
DDB1-218ENST00000540784 INO80Q9ULG1 1556 aaPredicted RBP23.55■■□□□ 1.36
DDB1-218ENST00000540784 DIP2CQ9Y2E4 1556 aa23.55■■□□□ 1.36
DDB1-218ENST00000540784 DNMT1P26358 1616 aaKnown RBP23.55■■□□□ 1.36
DDB1-218ENST00000540784 ABCA6Q8N139 1617 aa23.53■■□□□ 1.36
DDB1-218ENST00000540784 DHX29Q7Z478 1369 aaKnown RBP23.52■■□□□ 1.36
DDB1-218ENST00000540784 A2MP01023 1474 aa23.52■■□□□ 1.36
DDB1-218ENST00000540784 SHANK2Q9UPX8 1470 aa23.52■■□□□ 1.36
DDB1-218ENST00000540784 MLECQ14165 292 aa23.52■■□□□ 1.36
DDB1-218ENST00000540784 MAST1Q9Y2H9 1570 aa23.52■■□□□ 1.36
DDB1-218ENST00000540784 ANKRD30AQ9BXX3 1397 aa23.52■■□□□ 1.36
DDB1-218ENST00000540784 PTPRKQ15262 1439 aa23.49■■□□□ 1.35
DDB1-218ENST00000540784 KDM4FA0A1W2PPD8 638 aa23.48■■□□□ 1.35
DDB1-218ENST00000540784 REREQ9P2R6 1566 aa23.48■■□□□ 1.35
DDB1-218ENST00000540784 NCOA1Q15788 1441 aa23.47■■□□□ 1.35
DDB1-218ENST00000540784 KIF3BO15066 747 aa23.46■■□□□ 1.35
DDB1-218ENST00000540784 KIF15Q9NS87 1388 aa23.46■■□□□ 1.35
DDB1-218ENST00000540784 CROCC2H7BZ55 1655 aa23.44■■□□□ 1.34
DDB1-218ENST00000540784 ADGBQ8N7X0 1667 aa23.44■■□□□ 1.34
DDB1-218ENST00000540784 AGLP35573 1532 aa23.44■■□□□ 1.34
DDB1-218ENST00000540784 GGT6Q6P531 493 aa23.44■■□□□ 1.34
DDB1-218ENST00000540784 ADGRL2O95490 1459 aa23.42■■□□□ 1.34
DDB1-218ENST00000540784 ROCK1Q13464 1354 aa23.41■■□□□ 1.34
DDB1-218ENST00000540784 PLXNC1O60486 1568 aa23.41■■□□□ 1.34
DDB1-218ENST00000540784 ESF1Q9H501 851 aaKnown RBP23.41■■□□□ 1.34
DDB1-218ENST00000540784 SIGLEC1Q9BZZ2 1709 aa23.41■■□□□ 1.34
DDB1-218ENST00000540784 DUOX2Q9NRD8 1548 aa23.4■■□□□ 1.34
DDB1-218ENST00000540784 PPP6R1Q9UPN7 881 aa23.37■■□□□ 1.33
DDB1-218ENST00000540784 BCORL1Q5H9F3 1711 aa23.36■■□□□ 1.33
DDB1-218ENST00000540784 ERBINQ96RT1 1412 aa23.33■■□□□ 1.33
DDB1-218ENST00000540784 ANKRD50Q9ULJ7 1429 aa23.33■■□□□ 1.32
DDB1-218ENST00000540784 ADAMTSL3P82987 1691 aa23.32■■□□□ 1.32
DDB1-218ENST00000540784 AEBP2Q6ZN18 517 aaPredicted RBP23.31■■□□□ 1.32
DDB1-218ENST00000540784 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.31■■□□□ 1.321e-8■■□□□ 13.1
DDB1-218ENST00000540784 WASHC2CQ9Y4E1 1318 aa23.3■■□□□ 1.32
DDB1-218ENST00000540784 PLPPR3Q6T4P5 718 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms