RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 FGD6Q6ZV73 1430 aa21.61■■□□□ 1.05
CYB561A3-216ENST00000540755 NEO1Q92859 1461 aa21.61■■□□□ 1.05
CYB561A3-216ENST00000540755 FRMPD1Q5SYB0 1578 aa21.61■■□□□ 1.05
CYB561A3-216ENST00000540755 PLEKHD1A6NEE1 506 aa21.58■■□□□ 1.05
CYB561A3-216ENST00000540755 KIF14Q15058 1648 aa21.58■■□□□ 1.05
CYB561A3-216ENST00000540755 TTC37Q6PGP7 1564 aa21.56■■□□□ 1.04
CYB561A3-216ENST00000540755 ITSN2Q9NZM3 1697 aa21.56■■□□□ 1.04
CYB561A3-216ENST00000540755 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.55■■□□□ 1.04
CYB561A3-216ENST00000540755 MIA2Q96PC5 1412 aa21.55■■□□□ 1.04
CYB561A3-216ENST00000540755 PTPN23Q9H3S7 1636 aa21.55■■□□□ 1.04
CYB561A3-216ENST00000540755 TCOF1Q13428 1488 aaKnown RBP21.53■■□□□ 1.04
CYB561A3-216ENST00000540755 RAPGEF3O95398 923 aa21.52■■□□□ 1.03
CYB561A3-216ENST00000540755 HECW2Q9P2P5 1572 aa21.51■■□□□ 1.03
CYB561A3-216ENST00000540755 CDC42BPAQ5VT25 1732 aa21.49■■□□□ 1.03
CYB561A3-216ENST00000540755 RICTORQ6R327 1708 aa21.49■■□□□ 1.03
CYB561A3-216ENST00000540755 FANCAO15360 1455 aa21.47■■□□□ 1.03
CYB561A3-216ENST00000540755 FAM50AQ14320 339 aaKnown RBP21.47■■□□□ 1.03
CYB561A3-216ENST00000540755 ARHGEF40Q8TER5 1519 aa21.47■■□□□ 1.03
CYB561A3-216ENST00000540755 GPATCH8Q9UKJ3 1502 aaKnown RBP21.47■■□□□ 1.03
CYB561A3-216ENST00000540755 CFAP74Q9C0B2 1584 aa21.47■■□□□ 1.03
CYB561A3-216ENST00000540755 ADAMTSL3P82987 1691 aa21.46■■□□□ 1.03
CYB561A3-216ENST00000540755 AKNAQ7Z591 1439 aa21.45■■□□□ 1.02
CYB561A3-216ENST00000540755 DENND4BO75064 1496 aaPredicted RBP21.44■■□□□ 1.02
CYB561A3-216ENST00000540755 ZMYM4Q5VZL5 1548 aa21.42■■□□□ 1.02
CYB561A3-216ENST00000540755 PREX2Q70Z35 1606 aa21.41■■□□□ 1.02
CYB561A3-216ENST00000540755 BCORL1Q5H9F3 1711 aa21.41■■□□□ 1.02
CYB561A3-216ENST00000540755 MYO5CQ9NQX4 1742 aa21.38■■□□□ 1.01
CYB561A3-216ENST00000540755 CDC42BPBQ9Y5S2 1711 aa21.38■■□□□ 1.01
CYB561A3-216ENST00000540755 ITGAEP38570 1179 aa21.38■■□□□ 1.01
CYB561A3-216ENST00000540755 PTPRMP28827 1452 aa21.37■■□□□ 1.01
CYB561A3-216ENST00000540755 PLCH2O75038 1416 aa21.37■■□□□ 1.01
CYB561A3-216ENST00000540755 CFDP1Q9UEE9 299 aaPredicted RBP21.37■■□□□ 1.01
CYB561A3-216ENST00000540755 MADDQ8WXG6 1647 aa21.36■■□□□ 1.01
CYB561A3-216ENST00000540755 CAMSAP2Q08AD1 1489 aa21.36■■□□□ 1.01
CYB561A3-216ENST00000540755 SIGLEC1Q9BZZ2 1709 aa21.36■■□□□ 1.01
CYB561A3-216ENST00000540755 DNMT1P26358 1616 aaKnown RBP21.36■■□□□ 1.01
CYB561A3-216ENST00000540755 ZFYVE16Q7Z3T8 1539 aa21.34■■□□□ 1.01
CYB561A3-216ENST00000540755 POGZQ7Z3K3 1410 aa21.34■■□□□ 1.01
CYB561A3-216ENST00000540755 YEATS2Q9ULM3 1422 aa21.33■■□□□ 1.01
CYB561A3-216ENST00000540755 PTPRKQ15262 1439 aa21.32■■□□□ 1
CYB561A3-216ENST00000540755 DAPK1P53355 1430 aa21.3■■□□□ 1
CYB561A3-216ENST00000540755 SCAPERQ9BY12 1400 aa21.3■■□□□ 1
CYB561A3-216ENST00000540755 MAGI2Q86UL8 1455 aa21.3■■□□□ 1
CYB561A3-216ENST00000540755 HRCP23327 699 aa21.29■■□□□ 1
CYB561A3-216ENST00000540755 CROCC2H7BZ55 1655 aa21.29■■□□□ 1
CYB561A3-216ENST00000540755 SETD5Q9C0A6 1442 aa21.28■■□□□ 1
CYB561A3-216ENST00000540755 ZNF644Q9H582 1327 aaPredicted RBP21.28■■□□□ 1
CYB561A3-216ENST00000540755 SAMD9LQ8IVG5 1584 aa21.27■■□□□ 1
CYB561A3-216ENST00000540755 ARHGAP5Q13017 1502 aa21.27■■□□□ 1
CYB561A3-216ENST00000540755 ARID4BQ4LE39 1312 aaPredicted RBP21.27■■□□□ 1
CYB561A3-216ENST00000540755 RIMS1Q86UR5 1692 aaKnown RBP21.27■□□□□ 0.99
CYB561A3-216ENST00000540755 ABCC5O15440 1437 aa21.26■□□□□ 0.99
CYB561A3-216ENST00000540755 HFM1A2PYH4 1435 aa21.25■□□□□ 0.99
CYB561A3-216ENST00000540755 GCC2Q8IWJ2 1684 aa21.25■□□□□ 0.99
CYB561A3-216ENST00000540755 ARHGEF5Q12774 1597 aa21.25■□□□□ 0.99
CYB561A3-216ENST00000540755 ZNF777Q9ULD5 760 aaPredicted RBP21.24■□□□□ 0.99
CYB561A3-216ENST00000540755 ADGBQ8N7X0 1667 aa21.23■□□□□ 0.99
CYB561A3-216ENST00000540755 RAB3GAP2Q9H2M9 1393 aa21.23■□□□□ 0.99
CYB561A3-216ENST00000540755 KDM5CP41229 1560 aa21.22■□□□□ 0.99
CYB561A3-216ENST00000540755 CCER1Q8TC90 406 aaPredicted RBP21.22■□□□□ 0.99
CYB561A3-216ENST00000540755 ROCK1Q13464 1354 aa21.22■□□□□ 0.99
CYB561A3-216ENST00000540755 PLEKHH2Q8IVE3 1493 aa21.21■□□□□ 0.99
CYB561A3-216ENST00000540755 EFCAB2Q5VUJ9 269 aa21.21■□□□□ 0.99
CYB561A3-216ENST00000540755 SHANK2Q9UPX8 1470 aa21.21■□□□□ 0.99
CYB561A3-216ENST00000540755 NAIPQ13075 1403 aa21.2■□□□□ 0.98
CYB561A3-216ENST00000540755 LMTK3Q96Q04 1460 aa21.2■□□□□ 0.98
CYB561A3-216ENST00000540755 ZNF518AQ6AHZ1 1483 aa21.19■□□□□ 0.98
CYB561A3-216ENST00000540755 MBD5Q9P267 1494 aa21.19■□□□□ 0.98
CYB561A3-216ENST00000540755 ZEB1P37275 1124 aaPredicted RBP21.19■□□□□ 0.98
CYB561A3-216ENST00000540755 KIAA1107Q9UPP5 1409 aa21.18■□□□□ 0.98
CYB561A3-216ENST00000540755 ILDR1Q86SU0 546 aaPredicted RBP21.18■□□□□ 0.98
CYB561A3-216ENST00000540755 ADGRL2O95490 1459 aa21.18■□□□□ 0.98
CYB561A3-216ENST00000540755 C9orf84Q5VXU9 1444 aa21.17■□□□□ 0.98
CYB561A3-216ENST00000540755 ATP10AO60312 1499 aa21.17■□□□□ 0.98
CYB561A3-216ENST00000540755 ABCC1P33527 1531 aa21.17■□□□□ 0.98
CYB561A3-216ENST00000540755 FER1L4A9Z1Z3 1794 aa21.16■□□□□ 0.98
CYB561A3-216ENST00000540755 SYCP2Q9BX26 1530 aa21.16■□□□□ 0.98
CYB561A3-216ENST00000540755 ARHGEF12Q9NZN5 1544 aa21.15■□□□□ 0.98
CYB561A3-216ENST00000540755 CCDC141Q6ZP82 1450 aa21.15■□□□□ 0.98
CYB561A3-216ENST00000540755 RSPH4AQ5TD94 716 aa21.15■□□□□ 0.98
CYB561A3-216ENST00000540755 CHIC2Q9UKJ5 165 aa21.14■□□□□ 0.98
CYB561A3-216ENST00000540755 DIP2CQ9Y2E4 1556 aa21.14■□□□□ 0.97
CYB561A3-216ENST00000540755 DHX57Q6P158 1386 aaKnown RBP21.14■□□□□ 0.97
CYB561A3-216ENST00000540755 ABCA6Q8N139 1617 aa21.12■□□□□ 0.97
CYB561A3-216ENST00000540755 MAST1Q9Y2H9 1570 aa21.12■□□□□ 0.97
CYB561A3-216ENST00000540755 AFAP1Q8N556 730 aa21.12■□□□□ 0.97
CYB561A3-216ENST00000540755 REREQ9P2R6 1566 aa21.1■□□□□ 0.97
CYB561A3-216ENST00000540755 HNRNPMP52272 730 aaKnown RBP eCLIP21.1■□□□□ 0.97
CYB561A3-216ENST00000540755 RRP7BPQ9NSQ0 103 aa21.1■□□□□ 0.97
CYB561A3-216ENST00000540755 NCOA1Q15788 1441 aa21.1■□□□□ 0.97
CYB561A3-216ENST00000540755 TRAPPC8Q9Y2L5 1435 aa21.1■□□□□ 0.97
CYB561A3-216ENST00000540755 MLH3Q9UHC1 1453 aa21.09■□□□□ 0.97
CYB561A3-216ENST00000540755 MLECQ14165 292 aa21.08■□□□□ 0.97
CYB561A3-216ENST00000540755 ANKRD30AQ9BXX3 1397 aa21.08■□□□□ 0.97
CYB561A3-216ENST00000540755 CLSPNQ9HAW4 1339 aa21.08■□□□□ 0.96
CYB561A3-216ENST00000540755 TSPY4P0CV99 314 aa21.07■□□□□ 0.96
CYB561A3-216ENST00000540755 TSPY10P0CW01 314 aa21.07■□□□□ 0.96
CYB561A3-216ENST00000540755 ACIN1Q9UKV3 1341 aaKnown RBP21.05■□□□□ 0.96
CYB561A3-216ENST00000540755 KIDINS220Q9ULH0 1771 aa21.04■□□□□ 0.96
CYB561A3-216ENST00000540755 PLXNC1O60486 1568 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms