RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 MAGI2Q86UL8 1455 aa33.89■■■■□ 3.02
CHFR-217ENST00000540537 ADAMTSL3P82987 1691 aa33.89■■■■□ 3.02
CHFR-217ENST00000540537 ARHGAP5Q13017 1502 aa33.88■■■■□ 3.01
CHFR-217ENST00000540537 ZFYVE16Q7Z3T8 1539 aa33.87■■■■□ 3.01
CHFR-217ENST00000540537 BCORL1Q5H9F3 1711 aa33.85■■■■□ 3.01
CHFR-217ENST00000540537 ARID4BQ4LE39 1312 aaPredicted RBP33.83■■■■□ 3.01
CHFR-217ENST00000540537 CDC42BPBQ9Y5S2 1711 aa33.82■■■■□ 3
CHFR-217ENST00000540537 YEATS2Q9ULM3 1422 aa33.82■■■■□ 3
CHFR-217ENST00000540537 PREX2Q70Z35 1606 aa33.81■■■■□ 3
CHFR-217ENST00000540537 CEP162Q5TB80 1403 aa33.79■■■■□ 3
CHFR-217ENST00000540537 ZNF518AQ6AHZ1 1483 aa33.77■■■■□ 3
CHFR-217ENST00000540537 PTPRMP28827 1452 aa33.75■■■□□ 2.99
CHFR-217ENST00000540537 HECW2Q9P2P5 1572 aa33.73■■■□□ 2.99
CHFR-217ENST00000540537 MADDQ8WXG6 1647 aa33.73■■■□□ 2.99
CHFR-217ENST00000540537 CDC42BPAQ5VT25 1732 aa33.73■■■□□ 2.99
CHFR-217ENST00000540537 KDM5CP41229 1560 aa33.72■■■□□ 2.99
CHFR-217ENST00000540537 SIGLEC1Q9BZZ2 1709 aa33.7■■■□□ 2.98
CHFR-217ENST00000540537 ATP10AO60312 1499 aa33.69■■■□□ 2.98
CHFR-217ENST00000540537 ABCC1P33527 1531 aa33.69■■■□□ 2.98
CHFR-217ENST00000540537 AFAP1Q8N556 730 aa33.66■■■□□ 2.98
CHFR-217ENST00000540537 C9orf84Q5VXU9 1444 aa33.65■■■□□ 2.98
CHFR-217ENST00000540537 ITSN2Q9NZM3 1697 aa33.64■■■□□ 2.98
CHFR-217ENST00000540537 GPATCH8Q9UKJ3 1502 aaKnown RBP33.63■■■□□ 2.97
CHFR-217ENST00000540537 MTUS2Q5JR59 1369 aa33.62■■■□□ 2.97
CHFR-217ENST00000540537 ARHGEF12Q9NZN5 1544 aa33.62■■■□□ 2.97
CHFR-217ENST00000540537 RIMS1Q86UR5 1692 aaKnown RBP33.61■■■□□ 2.97
CHFR-217ENST00000540537 TRAPPC8Q9Y2L5 1435 aa33.6■■■□□ 2.97
CHFR-217ENST00000540537 MLH3Q9UHC1 1453 aa33.59■■■□□ 2.97
CHFR-217ENST00000540537 EHBP1L1Q8N3D4 1523 aa33.56■■■□□ 2.96
CHFR-217ENST00000540537 SAMD9LQ8IVG5 1584 aa33.55■■■□□ 2.96
CHFR-217ENST00000540537 DIP2CQ9Y2E4 1556 aa33.55■■■□□ 2.96
CHFR-217ENST00000540537 LOC105371045A0A1W2PR82 267 aa33.55■■■□□ 2.96
CHFR-217ENST00000540537 CCNB3Q8WWL7 1395 aa33.55■■■□□ 2.96
CHFR-217ENST00000540537 MYT1LQ9UL68 1186 aa33.54■■■□□ 2.96
CHFR-217ENST00000540537 REREQ9P2R6 1566 aa33.52■■■□□ 2.96
CHFR-217ENST00000540537 MLECQ14165 292 aa33.52■■■□□ 2.96
CHFR-217ENST00000540537 ZNF777Q9ULD5 760 aaPredicted RBP33.52■■■□□ 2.96
CHFR-217ENST00000540537 FER1L4A9Z1Z3 1794 aa33.52■■■□□ 2.96
CHFR-217ENST00000540537 ABCA6Q8N139 1617 aa33.51■■■□□ 2.96
CHFR-217ENST00000540537 CFDP1Q9UEE9 299 aaPredicted RBP33.49■■■□□ 2.95
CHFR-217ENST00000540537 SYCP2Q9BX26 1530 aa33.48■■■□□ 2.95
CHFR-217ENST00000540537 PLEKHH2Q8IVE3 1493 aa33.48■■■□□ 2.95
CHFR-217ENST00000540537 KIDINS220Q9ULH0 1771 aa33.47■■■□□ 2.95
CHFR-217ENST00000540537 KIAA1107Q9UPP5 1409 aa33.46■■■□□ 2.95
CHFR-217ENST00000540537 TIAM1Q13009 1591 aa33.46■■■□□ 2.95
CHFR-217ENST00000540537 VPS8Q8N3P4 1428 aa33.44■■■□□ 2.94
CHFR-217ENST00000540537 AGLP35573 1532 aa33.41■■■□□ 2.94
CHFR-217ENST00000540537 HNRNPMP52272 730 aaKnown RBP eCLIP33.4■■■□□ 2.94
CHFR-217ENST00000540537 LMTK3Q96Q04 1460 aa33.37■■■□□ 2.93
CHFR-217ENST00000540537 SUPT6HQ7KZ85 1726 aaKnown RBP33.36■■■□□ 2.93
CHFR-217ENST00000540537 SPAG9O60271 1321 aaKnown RBP33.36■■■□□ 2.93
CHFR-217ENST00000540537 NCOA2Q15596 1464 aa33.33■■■□□ 2.93
CHFR-217ENST00000540537 PLPPR3Q6T4P5 718 aa33.33■■■□□ 2.93
CHFR-217ENST00000540537 ATP7AQ04656 1500 aa33.32■■■□□ 2.92
CHFR-217ENST00000540537 INO80Q9ULG1 1556 aaPredicted RBP33.31■■■□□ 2.92
CHFR-217ENST00000540537 ZNF644Q9H582 1327 aaPredicted RBP33.28■■■□□ 2.92
CHFR-217ENST00000540537 LRRC9Q6ZRR7 1453 aa33.26■■■□□ 2.92
CHFR-217ENST00000540537 MBD5Q9P267 1494 aa33.26■■■□□ 2.92
CHFR-217ENST00000540537 MAP3K1Q13233 1512 aa33.25■■■□□ 2.91
CHFR-217ENST00000540537 CEBPAP49715 358 aaPredicted RBP33.21■■■□□ 2.91
CHFR-217ENST00000540537 PLXNC1O60486 1568 aa33.21■■■□□ 2.91
CHFR-217ENST00000540537 A2MP01023 1474 aa33.19■■■□□ 2.9
CHFR-217ENST00000540537 CAMSAP2Q08AD1 1489 aa33.18■■■□□ 2.9
CHFR-217ENST00000540537 PREX1Q8TCU6 1659 aa33.18■■■□□ 2.9
CHFR-217ENST00000540537 ESF1Q9H501 851 aaKnown RBP33.18■■■□□ 2.9
CHFR-217ENST00000540537 CNTLNQ9NXG0 1405 aa33.18■■■□□ 2.9
CHFR-217ENST00000540537 RTEL1-TNFRSF6BF6WH68 1400 aa33.17■■■□□ 2.9
CHFR-217ENST00000540537 SETD1BQ9UPS6 1966 aaKnown RBP33.16■■■□□ 2.9
CHFR-217ENST00000540537 C3P01024 1663 aa33.16■■■□□ 2.9
CHFR-217ENST00000540537 ADGBQ8N7X0 1667 aa33.16■■■□□ 2.9
CHFR-217ENST00000540537 HSPA2P54652 639 aa33.15■■■□□ 2.9
CHFR-217ENST00000540537 CCDC141Q6ZP82 1450 aa33.14■■■□□ 2.9
CHFR-217ENST00000540537 RSPH4AQ5TD94 716 aa33.12■■■□□ 2.89
CHFR-217ENST00000540537 KANK4Q5T7N3 995 aaPredicted RBP33.11■■■□□ 2.89
CHFR-217ENST00000540537 MROH2AA6NES4 1674 aa33.08■■■□□ 2.89
CHFR-217ENST00000540537 ARHGEF5Q12774 1597 aa33.08■■■□□ 2.89
CHFR-217ENST00000540537 UHRF1BP1Q6BDS2 1440 aa33.06■■■□□ 2.88
CHFR-217ENST00000540537 DHX29Q7Z478 1369 aaKnown RBP33.02■■■□□ 2.88
CHFR-217ENST00000540537 ILDR1Q86SU0 546 aaPredicted RBP33.02■■■□□ 2.88
CHFR-217ENST00000540537 MYOM3Q5VTT5 1437 aa33.01■■■□□ 2.87
CHFR-217ENST00000540537 MIA2Q96PC5 1412 aa33■■■□□ 2.87
CHFR-217ENST00000540537 APLP2Q06481 763 aa32.99■■■□□ 2.87
CHFR-217ENST00000540537 PPP6R1Q9UPN7 881 aa32.99■■■□□ 2.87
CHFR-217ENST00000540537 ZMYM3Q14202 1370 aa32.98■■■□□ 2.87
CHFR-217ENST00000540537 CLTCQ00610 1675 aaKnown RBP32.98■■■□□ 2.87
CHFR-217ENST00000540537 GGT6Q6P531 493 aa32.98■■■□□ 2.87
CHFR-217ENST00000540537 NPATQ14207 1427 aa32.97■■■□□ 2.87
CHFR-217ENST00000540537 TSPY4P0CV99 314 aa32.96■■■□□ 2.87
CHFR-217ENST00000540537 TSPY10P0CW01 314 aa32.96■■■□□ 2.87
CHFR-217ENST00000540537 MAST1Q9Y2H9 1570 aa32.92■■■□□ 2.86
CHFR-217ENST00000540537 STRCQ7RTU9 1775 aa32.87■■■□□ 2.85
CHFR-217ENST00000540537 KIF3BO15066 747 aa32.86■■■□□ 2.85
CHFR-217ENST00000540537 FAM135AQ9P2D6 1515 aa32.86■■■□□ 2.85
CHFR-217ENST00000540537 PTPRKQ15262 1439 aa32.85■■■□□ 2.85
CHFR-217ENST00000540537 DMRT2Q9Y5R5 561 aa32.81■■■□□ 2.84
CHFR-217ENST00000540537 KDM5DQ9BY66 1539 aa32.8■■■□□ 2.84
CHFR-217ENST00000540537 PTPN23Q9H3S7 1636 aa32.8■■■□□ 2.84
CHFR-217ENST00000540537 MYO3AQ8NEV4 1616 aa32.77■■■□□ 2.84
CHFR-217ENST00000540537 FBXO41Q8TF61 875 aa32.77■■■□□ 2.84
CHFR-217ENST00000540537 ZNF142P52746 1687 aaPredicted RBP32.76■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms