RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 TSHZ2Q9NRE2 1034 aa9.23□□□□□ -0.93
MDM2-226ENST00000540352 SLC24A1O60721 1099 aa9.19□□□□□ -0.94
MDM2-226ENST00000540352 TMEM121BQ9BXQ6 578 aaPredicted RBP9.19□□□□□ -0.94
MDM2-226ENST00000540352 MAMSTRQ6ZN01 415 aa9.18□□□□□ -0.94
MDM2-226ENST00000540352 SCUBE2Q9NQ36 999 aa9.18□□□□□ -0.94
MDM2-226ENST00000540352 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.18□□□□□ -0.94
MDM2-226ENST00000540352 CADPS2Q86UW7 1296 aa9.16□□□□□ -0.94
MDM2-226ENST00000540352 TMC2Q8TDI7 906 aa9.15□□□□□ -0.94
MDM2-226ENST00000540352 PDE4AP27815 886 aa9.11□□□□□ -0.95
MDM2-226ENST00000540352 FAM163AQ96GL9 167 aaPredicted RBP9.11□□□□□ -0.95
MDM2-226ENST00000540352 WDR70Q9NW82 654 aa9.11□□□□□ -0.95
MDM2-226ENST00000540352 SLAIN1Q8ND83 568 aa9.1□□□□□ -0.95
MDM2-226ENST00000540352 LARP6Q9BRS8 491 aaKnown RBP9.09□□□□□ -0.95
MDM2-226ENST00000540352 NCKAP5LQ9HCH0 1330 aa9.09□□□□□ -0.95
MDM2-226ENST00000540352 C2orf72A6NCS6 295 aa9.08□□□□□ -0.96
MDM2-226ENST00000540352 VSIG10Q8N0Z9 540 aa9.08□□□□□ -0.96
MDM2-226ENST00000540352 CRISPLD2Q9H0B8 497 aa9.08□□□□□ -0.96
MDM2-226ENST00000540352 TMEM92Q6UXU6 159 aa9.07□□□□□ -0.96
MDM2-226ENST00000540352 DDX27Q96GQ7 796 aaKnown RBP9.07□□□□□ -0.96
MDM2-226ENST00000540352 GPHNQ9NQX3 736 aaPredicted RBP9.06□□□□□ -0.96
MDM2-226ENST00000540352 PPP1R15BQ5SWA1 713 aa9.05□□□□□ -0.96
MDM2-226ENST00000540352 KIF3CO14782 793 aa9.04□□□□□ -0.96
MDM2-226ENST00000540352 KDM2AQ9Y2K7 1162 aa9.04□□□□□ -0.96
MDM2-226ENST00000540352 DSG2Q14126 1118 aa9.03□□□□□ -0.96
MDM2-226ENST00000540352 FOXK1P85037 733 aa9.02□□□□□ -0.97
MDM2-226ENST00000540352 MFSD10Q14728 455 aa9.02□□□□□ -0.97
MDM2-226ENST00000540352 CDAN1Q8IWY9 1227 aa9.02□□□□□ -0.97
MDM2-226ENST00000540352 PLPP6Q8IY26 295 aa9.02□□□□□ -0.97
MDM2-226ENST00000540352 E2F4Q16254 413 aa8.97□□□□□ -0.97
MDM2-226ENST00000540352 P3H3Q8IVL6 736 aa8.96□□□□□ -0.98
MDM2-226ENST00000540352 SNPHO15079 494 aa8.95□□□□□ -0.98
MDM2-226ENST00000540352 DOK7Q18PE1 504 aa8.95□□□□□ -0.98
MDM2-226ENST00000540352 RIMBP2O15034 1052 aa8.94□□□□□ -0.98
MDM2-226ENST00000540352 UPF1Q92900 1129 aaKnown RBP eCLIP8.94□□□□□ -0.98
MDM2-226ENST00000540352 ZNF710Q8N1W2 664 aa8.93□□□□□ -0.98
MDM2-226ENST00000540352 KCNV2Q8TDN2 545 aa8.92□□□□□ -0.98
MDM2-226ENST00000540352 CAMK2BQ13554 666 aa8.9□□□□□ -0.98
MDM2-226ENST00000540352 TBC1D12O60347 775 aa8.89□□□□□ -0.99
MDM2-226ENST00000540352 EMILIN3Q9NT22 766 aa8.89□□□□□ -0.99
MDM2-226ENST00000540352 DPYSL4O14531 572 aa8.88□□□□□ -0.99
MDM2-226ENST00000540352 HOXB3P14651 431 aaPredicted RBP8.88□□□□□ -0.99
MDM2-226ENST00000540352 MAP3K9P80192 1104 aa8.88□□□□□ -0.99
MDM2-226ENST00000540352 ZNF316A6NFI3 1004 aaPredicted RBP8.87□□□□□ -0.99
MDM2-226ENST00000540352 MMRN1Q13201 1228 aa8.87□□□□□ -0.99
MDM2-226ENST00000540352 SLC34A2O95436 690 aa8.86□□□□□ -0.99
MDM2-226ENST00000540352 OXER1Q8TDS5 423 aa8.86□□□□□ -0.99
MDM2-226ENST00000540352 PCDHGA4Q9Y5G9 962 aa8.86□□□□□ -0.99
MDM2-226ENST00000540352 ST18O60284 1047 aa8.85□□□□□ -0.99
MDM2-226ENST00000540352 ARHGEF1Q92888 912 aaKnown RBP8.85□□□□□ -0.99
MDM2-226ENST00000540352 SPNS2Q8IVW8 549 aa8.84□□□□□ -0.99
MDM2-226ENST00000540352 PTCD2Q8WV60 388 aaKnown RBP8.84□□□□□ -0.99
MDM2-226ENST00000540352 ZSWIM6Q9HCJ5 1215 aa8.84□□□□□ -0.99
MDM2-226ENST00000540352 NBR1Q14596 966 aa8.83□□□□□ -1
MDM2-226ENST00000540352 ARSIQ5FYB1 569 aa8.83□□□□□ -1
MDM2-226ENST00000540352 ARIH1Q9Y4X5 557 aaPredicted RBP8.83□□□□□ -1
MDM2-226ENST00000540352 NUDT7P0C024 238 aa8.81□□□□□ -1
MDM2-226ENST00000540352 KHSRPQ92945 711 aaKnown RBP eCLIP8.81□□□□□ -12e-9■■■□□ 16.5
MDM2-226ENST00000540352 EVI5O60447 810 aa8.8□□□□□ -1
MDM2-226ENST00000540352 SPDYE16A6NNV3 312 aaPredicted RBP8.79□□□□□ -1
MDM2-226ENST00000540352 HOXB1P14653 301 aaPredicted RBP8.79□□□□□ -1
MDM2-226ENST00000540352 PDIA6Q15084 440 aa8.79□□□□□ -1
MDM2-226ENST00000540352 GPR153Q6NV75 609 aa8.79□□□□□ -1
MDM2-226ENST00000540352 KDM4FA0A1W2PPD8 638 aa8.76□□□□□ -1.01
MDM2-226ENST00000540352 EMP3P54852 163 aa8.76□□□□□ -1.01
MDM2-226ENST00000540352 MARVELD3Q96A59 401 aa8.76□□□□□ -1.01
MDM2-226ENST00000540352 BCANQ96GW7 911 aa8.75□□□□□ -1.01
MDM2-226ENST00000540352 SEMA3EO15041 775 aa8.74□□□□□ -1.01
MDM2-226ENST00000540352 GRXCR2A6NFK2 248 aa8.73□□□□□ -1.01
MDM2-226ENST00000540352 DDX12PQ92771 950 aa8.73□□□□□ -1.01
MDM2-226ENST00000540352 LHX6Q9UPM6 363 aa8.73□□□□□ -1.01
MDM2-226ENST00000540352 ERBB3P21860 1342 aa8.72□□□□□ -1.01
MDM2-226ENST00000540352 TULP1O00294 542 aaPredicted RBP8.72□□□□□ -1.01
MDM2-226ENST00000540352 ANO8Q9HCE9 1232 aaPredicted RBP8.72□□□□□ -1.01
MDM2-226ENST00000540352 ZNF454Q8N9F8 522 aa8.71□□□□□ -1.02
MDM2-226ENST00000540352 SMYD5Q6GMV2 418 aa8.7□□□□□ -1.02
MDM2-226ENST00000540352 PSDA5PKW4 1024 aaPredicted RBP8.69□□□□□ -1.02
MDM2-226ENST00000540352 FAM205CA6NFA0 338 aa8.69□□□□□ -1.02
MDM2-226ENST00000540352 MLLT3P42568 568 aaPredicted RBP8.69□□□□□ -1.02
MDM2-226ENST00000540352 PPP4R3BQ5MIZ7 849 aa8.68□□□□□ -1.02
MDM2-226ENST00000540352 VARS2Q5ST30 1063 aaKnown RBP8.68□□□□□ -1.02
MDM2-226ENST00000540352 JPH4Q96JJ6 628 aa8.68□□□□□ -1.02
MDM2-226ENST00000540352 TESPA1A2RU30 521 aaPredicted RBP8.67□□□□□ -1.02
MDM2-226ENST00000540352 PHF14O94880 888 aa8.67□□□□□ -1.02
MDM2-226ENST00000540352 PTGER2P43116 358 aa8.67□□□□□ -1.02
MDM2-226ENST00000540352 FOSBP53539 338 aa8.65□□□□□ -1.02
MDM2-226ENST00000540352 TYW1BQ6NUM6 668 aa8.65□□□□□ -1.02
MDM2-226ENST00000540352 RBM33Q96EV2 1170 aaKnown RBP8.65□□□□□ -1.02
MDM2-226ENST00000540352 EPAS1Q99814 870 aa8.65□□□□□ -1.02
MDM2-226ENST00000540352 PCDHGA10Q9Y5H3 936 aa8.65□□□□□ -1.02
MDM2-226ENST00000540352 ZDHHC16Q969W1 377 aa8.64□□□□□ -1.03
MDM2-226ENST00000540352 HS3ST6Q96QI5 342 aa8.64□□□□□ -1.03
MDM2-226ENST00000540352 MAP3K7O43318 606 aa8.63□□□□□ -1.03
MDM2-226ENST00000540352 FBXW7Q969H0 707 aa8.63□□□□□ -1.03
MDM2-226ENST00000540352 KCNH8Q96L42 1107 aa8.62□□□□□ -1.03
MDM2-226ENST00000540352 POTEB3A0JP26 581 aa8.6□□□□□ -1.03
MDM2-226ENST00000540352 OSBPP22059 807 aa8.6□□□□□ -1.03
MDM2-226ENST00000540352 EN1Q05925 392 aaPredicted RBP8.6□□□□□ -1.03
MDM2-226ENST00000540352 POTEBQ6S5H4 581 aa8.6□□□□□ -1.03
MDM2-226ENST00000540352 KRTAP3-3Q9BYR6 98 aa8.6□□□□□ -1.03
MDM2-226ENST00000540352 KRTAP3-2Q9BYR7 98 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms