RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 ZMYM4Q5VZL5 1548 aa30.79■■■□□ 2.52
TNFRSF1A-212ENST00000539372 POGZQ7Z3K3 1410 aa30.79■■■□□ 2.52
TNFRSF1A-212ENST00000539372 YEATS2Q9ULM3 1422 aa30.76■■■□□ 2.51
TNFRSF1A-212ENST00000539372 ZFYVE16Q7Z3T8 1539 aa30.75■■■□□ 2.51
TNFRSF1A-212ENST00000539372 ADAMTSL3P82987 1691 aa30.74■■■□□ 2.51
TNFRSF1A-212ENST00000539372 MAGI2Q86UL8 1455 aa30.71■■■□□ 2.51
TNFRSF1A-212ENST00000539372 BCORL1Q5H9F3 1711 aa30.71■■■□□ 2.51
TNFRSF1A-212ENST00000539372 CEP162Q5TB80 1403 aa30.71■■■□□ 2.51
TNFRSF1A-212ENST00000539372 CDC42BPBQ9Y5S2 1711 aa30.68■■■□□ 2.5
TNFRSF1A-212ENST00000539372 HECW2Q9P2P5 1572 aa30.66■■■□□ 2.5
TNFRSF1A-212ENST00000539372 PREX2Q70Z35 1606 aa30.66■■■□□ 2.5
TNFRSF1A-212ENST00000539372 PTPRMP28827 1452 aa30.66■■■□□ 2.5
TNFRSF1A-212ENST00000539372 AFAP1Q8N556 730 aa30.65■■■□□ 2.5
TNFRSF1A-212ENST00000539372 MADDQ8WXG6 1647 aa30.65■■■□□ 2.5
TNFRSF1A-212ENST00000539372 SIGLEC1Q9BZZ2 1709 aa30.64■■■□□ 2.5
TNFRSF1A-212ENST00000539372 ZNF518AQ6AHZ1 1483 aa30.63■■■□□ 2.49
TNFRSF1A-212ENST00000539372 LOC105371045A0A1W2PR82 267 aa30.62■■■□□ 2.49
TNFRSF1A-212ENST00000539372 CDC42BPAQ5VT25 1732 aa30.59■■■□□ 2.49
TNFRSF1A-212ENST00000539372 ATP10AO60312 1499 aa30.58■■■□□ 2.49
TNFRSF1A-212ENST00000539372 MYT1LQ9UL68 1186 aa30.58■■■□□ 2.49
TNFRSF1A-212ENST00000539372 KDM5CP41229 1560 aa30.58■■■□□ 2.49
TNFRSF1A-212ENST00000539372 MLECQ14165 292 aa30.57■■■□□ 2.48
TNFRSF1A-212ENST00000539372 ABCC1P33527 1531 aa30.57■■■□□ 2.48
TNFRSF1A-212ENST00000539372 ARHGEF12Q9NZN5 1544 aa30.57■■■□□ 2.48
TNFRSF1A-212ENST00000539372 MTUS2Q5JR59 1369 aa30.56■■■□□ 2.48
TNFRSF1A-212ENST00000539372 C9orf84Q5VXU9 1444 aa30.56■■■□□ 2.48
TNFRSF1A-212ENST00000539372 ZNF777Q9ULD5 760 aaPredicted RBP30.55■■■□□ 2.48
TNFRSF1A-212ENST00000539372 TRAPPC8Q9Y2L5 1435 aa30.55■■■□□ 2.48
TNFRSF1A-212ENST00000539372 RIMS1Q86UR5 1692 aaKnown RBP30.54■■■□□ 2.48
TNFRSF1A-212ENST00000539372 GPATCH8Q9UKJ3 1502 aaKnown RBP30.53■■■□□ 2.48
TNFRSF1A-212ENST00000539372 ITSN2Q9NZM3 1697 aa30.52■■■□□ 2.48
TNFRSF1A-212ENST00000539372 PLPPR3Q6T4P5 718 aa30.5■■■□□ 2.47
TNFRSF1A-212ENST00000539372 CCNB3Q8WWL7 1395 aa30.48■■■□□ 2.47
TNFRSF1A-212ENST00000539372 SAMD9LQ8IVG5 1584 aa30.47■■■□□ 2.47
TNFRSF1A-212ENST00000539372 MLH3Q9UHC1 1453 aa30.46■■■□□ 2.47
TNFRSF1A-212ENST00000539372 DIP2CQ9Y2E4 1556 aa30.45■■■□□ 2.47
TNFRSF1A-212ENST00000539372 CFDP1Q9UEE9 299 aaPredicted RBP30.45■■■□□ 2.47
TNFRSF1A-212ENST00000539372 EHBP1L1Q8N3D4 1523 aa30.43■■■□□ 2.46
TNFRSF1A-212ENST00000539372 ABCA6Q8N139 1617 aa30.43■■■□□ 2.46
TNFRSF1A-212ENST00000539372 SYCP2Q9BX26 1530 aa30.42■■■□□ 2.46
TNFRSF1A-212ENST00000539372 HNRNPMP52272 730 aaKnown RBP eCLIP30.42■■■□□ 2.46
TNFRSF1A-212ENST00000539372 FER1L4A9Z1Z3 1794 aa30.41■■■□□ 2.46
TNFRSF1A-212ENST00000539372 TIAM1Q13009 1591 aa30.37■■■□□ 2.45
TNFRSF1A-212ENST00000539372 KIDINS220Q9ULH0 1771 aa30.36■■■□□ 2.45
TNFRSF1A-212ENST00000539372 REREQ9P2R6 1566 aa30.36■■■□□ 2.45
TNFRSF1A-212ENST00000539372 VPS8Q8N3P4 1428 aa30.35■■■□□ 2.45
TNFRSF1A-212ENST00000539372 PLEKHH2Q8IVE3 1493 aa30.34■■■□□ 2.45
TNFRSF1A-212ENST00000539372 KIAA1107Q9UPP5 1409 aa30.34■■■□□ 2.45
TNFRSF1A-212ENST00000539372 SPAG9O60271 1321 aaKnown RBP30.33■■■□□ 2.45
TNFRSF1A-212ENST00000539372 ZNF644Q9H582 1327 aaPredicted RBP30.32■■■□□ 2.44
TNFRSF1A-212ENST00000539372 LMTK3Q96Q04 1460 aa30.31■■■□□ 2.44
TNFRSF1A-212ENST00000539372 NCOA2Q15596 1464 aa30.28■■■□□ 2.44
TNFRSF1A-212ENST00000539372 AGLP35573 1532 aa30.27■■■□□ 2.44
TNFRSF1A-212ENST00000539372 CEBPAP49715 358 aaPredicted RBP30.27■■■□□ 2.44
TNFRSF1A-212ENST00000539372 SUPT6HQ7KZ85 1726 aaKnown RBP30.25■■■□□ 2.43
TNFRSF1A-212ENST00000539372 ATP7AQ04656 1500 aa30.25■■■□□ 2.43
TNFRSF1A-212ENST00000539372 HSPA2P54652 639 aa30.22■■■□□ 2.43
TNFRSF1A-212ENST00000539372 INO80Q9ULG1 1556 aaPredicted RBP30.21■■■□□ 2.43
TNFRSF1A-212ENST00000539372 LRRC9Q6ZRR7 1453 aa30.2■■■□□ 2.43
TNFRSF1A-212ENST00000539372 MBD5Q9P267 1494 aa30.2■■■□□ 2.43
TNFRSF1A-212ENST00000539372 ESF1Q9H501 851 aaKnown RBP30.19■■■□□ 2.42
TNFRSF1A-212ENST00000539372 KANK4Q5T7N3 995 aaPredicted RBP30.15■■■□□ 2.42
TNFRSF1A-212ENST00000539372 A2MP01023 1474 aa30.14■■■□□ 2.42
TNFRSF1A-212ENST00000539372 CAMSAP2Q08AD1 1489 aa30.14■■■□□ 2.42
TNFRSF1A-212ENST00000539372 MAP3K1Q13233 1512 aa30.11■■■□□ 2.41
TNFRSF1A-212ENST00000539372 PLXNC1O60486 1568 aa30.11■■■□□ 2.41
TNFRSF1A-212ENST00000539372 ILDR1Q86SU0 546 aaPredicted RBP30.1■■■□□ 2.41
TNFRSF1A-212ENST00000539372 C3P01024 1663 aa30.09■■■□□ 2.41
TNFRSF1A-212ENST00000539372 PREX1Q8TCU6 1659 aa30.08■■■□□ 2.41
TNFRSF1A-212ENST00000539372 CCDC141Q6ZP82 1450 aa30.07■■■□□ 2.4
TNFRSF1A-212ENST00000539372 CNTLNQ9NXG0 1405 aa30.07■■■□□ 2.4
TNFRSF1A-212ENST00000539372 RTEL1-TNFRSF6BF6WH68 1400 aa30.06■■■□□ 2.4
TNFRSF1A-212ENST00000539372 ADGBQ8N7X0 1667 aa30.06■■■□□ 2.4
TNFRSF1A-212ENST00000539372 GGT6Q6P531 493 aa30.03■■■□□ 2.4
TNFRSF1A-212ENST00000539372 UHRF1BP1Q6BDS2 1440 aa30.03■■■□□ 2.4
TNFRSF1A-212ENST00000539372 RSPH4AQ5TD94 716 aa30.02■■■□□ 2.4
TNFRSF1A-212ENST00000539372 APLP2Q06481 763 aa30.01■■■□□ 2.39
TNFRSF1A-212ENST00000539372 ZMYM3Q14202 1370 aa29.99■■■□□ 2.39
TNFRSF1A-212ENST00000539372 DHX29Q7Z478 1369 aaKnown RBP29.98■■■□□ 2.39
TNFRSF1A-212ENST00000539372 ARHGEF5Q12774 1597 aa29.98■■■□□ 2.39
TNFRSF1A-212ENST00000539372 SETD1BQ9UPS6 1966 aaKnown RBP29.97■■■□□ 2.39
TNFRSF1A-212ENST00000539372 MYOM3Q5VTT5 1437 aa29.96■■■□□ 2.39
TNFRSF1A-212ENST00000539372 MROH2AA6NES4 1674 aa29.96■■■□□ 2.39
TNFRSF1A-212ENST00000539372 CLTCQ00610 1675 aaKnown RBP29.96■■■□□ 2.39
TNFRSF1A-212ENST00000539372 TSPY4P0CV99 314 aa29.95■■■□□ 2.39
TNFRSF1A-212ENST00000539372 TSPY10P0CW01 314 aa29.95■■■□□ 2.39
TNFRSF1A-212ENST00000539372 MIA2Q96PC5 1412 aa29.92■■■□□ 2.38
TNFRSF1A-212ENST00000539372 KIF3BO15066 747 aa29.91■■■□□ 2.38
TNFRSF1A-212ENST00000539372 NPATQ14207 1427 aa29.89■■■□□ 2.38
TNFRSF1A-212ENST00000539372 PPP6R1Q9UPN7 881 aa29.89■■■□□ 2.38
TNFRSF1A-212ENST00000539372 STRCQ7RTU9 1775 aa29.84■■■□□ 2.37
TNFRSF1A-212ENST00000539372 PTPRKQ15262 1439 aa29.83■■■□□ 2.37
TNFRSF1A-212ENST00000539372 MAST1Q9Y2H9 1570 aa29.82■■■□□ 2.36
TNFRSF1A-212ENST00000539372 FBXO41Q8TF61 875 aa29.78■■■□□ 2.36
TNFRSF1A-212ENST00000539372 DMRT2Q9Y5R5 561 aa29.78■■■□□ 2.36
TNFRSF1A-212ENST00000539372 PTPN23Q9H3S7 1636 aa29.78■■■□□ 2.36
TNFRSF1A-212ENST00000539372 WASHC2CQ9Y4E1 1318 aa29.76■■■□□ 2.36
TNFRSF1A-212ENST00000539372 KDM5DQ9BY66 1539 aa29.76■■■□□ 2.35
TNFRSF1A-212ENST00000539372 MYO3AQ8NEV4 1616 aa29.74■■■□□ 2.35
TNFRSF1A-212ENST00000539372 FGD6Q6ZV73 1430 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms