RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 ASTLQ6HA08 431 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-210ENST00000539303 GPHNQ9NQX3 736 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-210ENST00000539303 EMILIN3Q9NT22 766 aa6.82□□□□□ -1.32
SNHG1-210ENST00000539303 PELP1Q8IZL8 1130 aaKnown RBP6.81□□□□□ -1.32
SNHG1-210ENST00000539303 ZC3H15Q8WU90 426 aaKnown RBP6.81□□□□□ -1.32
SNHG1-210ENST00000539303 MLLT3P42568 568 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-210ENST00000539303 SP7Q8TDD2 431 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-210ENST00000539303 DPYSL4O14531 572 aa6.79□□□□□ -1.32
SNHG1-210ENST00000539303 ARIH1Q9Y4X5 557 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-210ENST00000539303 C2orf72A6NCS6 295 aa6.78□□□□□ -1.32
SNHG1-210ENST00000539303 TMEM121BQ9BXQ6 578 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-210ENST00000539303 OCEL1Q9H607 264 aa6.78□□□□□ -1.32
SNHG1-210ENST00000539303 COLQQ9Y215 455 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-210ENST00000539303 BOLA1Q9Y3E2 137 aa6.78□□□□□ -1.32
SNHG1-210ENST00000539303 IER5LQ5T953 404 aa6.77□□□□□ -1.33
SNHG1-210ENST00000539303 TMEM92Q6UXU6 159 aa6.77□□□□□ -1.33
SNHG1-210ENST00000539303 TULP1O00294 542 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-210ENST00000539303 FOXK1P85037 733 aa6.76□□□□□ -1.33
SNHG1-210ENST00000539303 RBM26Q5T8P6 1007 aaKnown RBP6.76□□□□□ -1.33
SNHG1-210ENST00000539303 TMC2Q8TDI7 906 aa6.76□□□□□ -1.33
SNHG1-210ENST00000539303 SLC24A3Q9HC58 644 aa6.76□□□□□ -1.33
SNHG1-210ENST00000539303 POTEFA5A3E0 1075 aa6.75□□□□□ -1.33
SNHG1-210ENST00000539303 KIF3CO14782 793 aa6.75□□□□□ -1.33
SNHG1-210ENST00000539303 PLCG2P16885 1265 aa6.75□□□□□ -1.33
SNHG1-210ENST00000539303 PLPP6Q8IY26 295 aa6.75□□□□□ -1.33
SNHG1-210ENST00000539303 POTEIP0CG38 1075 aa6.73□□□□□ -1.33
SNHG1-210ENST00000539303 BRPF1P55201 1214 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-210ENST00000539303 PDIA6Q15084 440 aa6.72□□□□□ -1.33
SNHG1-210ENST00000539303 DCBLD2Q96PD2 775 aa6.72□□□□□ -1.33
SNHG1-210ENST00000539303 G3V3G9 751 aa6.71□□□□□ -1.34
SNHG1-210ENST00000539303 ZMYND10O75800 440 aa6.71□□□□□ -1.34
SNHG1-210ENST00000539303 SEC24BO95487 1268 aa6.71□□□□□ -1.34
SNHG1-210ENST00000539303 UPF1Q92900 1129 aaKnown RBP eCLIP6.71□□□□□ -1.34
SNHG1-210ENST00000539303 SMYD5Q6GMV2 418 aa6.7□□□□□ -1.34
SNHG1-210ENST00000539303 GPIHBP1Q8IV16 184 aa6.69□□□□□ -1.34
SNHG1-210ENST00000539303 SLC39A7Q92504 469 aa6.69□□□□□ -1.34
SNHG1-210ENST00000539303 C7P10643 843 aa6.68□□□□□ -1.34
SNHG1-210ENST00000539303 L3MBTL3Q96JM7 780 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-210ENST00000539303 GRXCR2A6NFK2 248 aa6.67□□□□□ -1.34
SNHG1-210ENST00000539303 BARGINQ6ZT62 677 aa6.67□□□□□ -1.34
SNHG1-210ENST00000539303 METRNQ9UJH8 293 aa6.67□□□□□ -1.34
SNHG1-210ENST00000539303 SPDYE16A6NNV3 312 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-210ENST00000539303 GPR37O15354 613 aa6.66□□□□□ -1.34
SNHG1-210ENST00000539303 MAP3K9P80192 1104 aa6.66□□□□□ -1.34
SNHG1-210ENST00000539303 NEUROD2Q15784 382 aa6.66□□□□□ -1.34
SNHG1-210ENST00000539303 TMEM132AQ24JP5 1023 aa6.65□□□□□ -1.34
SNHG1-210ENST00000539303 OXER1Q8TDS5 423 aa6.65□□□□□ -1.34
SNHG1-210ENST00000539303 PRIM1P49642 420 aaKnown RBP6.64□□□□□ -1.35
SNHG1-210ENST00000539303 DDX12PQ92771 950 aa6.64□□□□□ -1.35
SNHG1-210ENST00000539303 GTF3C3Q9Y5Q9 886 aa6.64□□□□□ -1.35
SNHG1-210ENST00000539303 TIMELESSQ9UNS1 1208 aa6.63□□□□□ -1.35
SNHG1-210ENST00000539303 OSBPP22059 807 aa6.62□□□□□ -1.35
SNHG1-210ENST00000539303 GPBP1L1Q9HC44 474 aaPredicted RBP6.62□□□□□ -1.35
SNHG1-210ENST00000539303 KRI1Q8N9T8 703 aaKnown RBP6.61□□□□□ -1.35
SNHG1-210ENST00000539303 EVI5O60447 810 aa6.6□□□□□ -1.35
SNHG1-210ENST00000539303 C3orf67Q6ZVT6 689 aa6.6□□□□□ -1.35
SNHG1-210ENST00000539303 NUTM2FA1L443 756 aa6.59□□□□□ -1.35
SNHG1-210ENST00000539303 FECHP22830 423 aa6.59□□□□□ -1.35
SNHG1-210ENST00000539303 AK7Q96M32 723 aa6.59□□□□□ -1.35
SNHG1-210ENST00000539303 PTGER2P43116 358 aa6.58□□□□□ -1.36
SNHG1-210ENST00000539303 TRIM66O15016 1216 aa6.57□□□□□ -1.36
SNHG1-210ENST00000539303 PTCD2Q8WV60 388 aaKnown RBP6.57□□□□□ -1.36
SNHG1-210ENST00000539303 POTEJP0CG39 1038 aa6.56□□□□□ -1.36
SNHG1-210ENST00000539303 CDHR5Q9HBB8 845 aa6.56□□□□□ -1.36
SNHG1-210ENST00000539303 TBC1D12O60347 775 aa6.55□□□□□ -1.36
SNHG1-210ENST00000539303 PDE4DQ08499 809 aa6.55□□□□□ -1.36
SNHG1-210ENST00000539303 CCDC102AQ96A19 550 aa6.55□□□□□ -1.36
SNHG1-210ENST00000539303 POTEB2H3BUK9 544 aa6.53□□□□□ -1.36
SNHG1-210ENST00000539303 SLC34A2O95436 690 aa6.53□□□□□ -1.36
SNHG1-210ENST00000539303 KDM4CQ9H3R0 1056 aa6.53□□□□□ -1.36
SNHG1-210ENST00000539303 ANO8Q9HCE9 1232 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-210ENST00000539303 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.53□□□□□ -1.36
SNHG1-210ENST00000539303 PCDHGA4Q9Y5G9 962 aa6.53□□□□□ -1.36
SNHG1-210ENST00000539303 GNPATO15228 680 aa6.52□□□□□ -1.37
SNHG1-210ENST00000539303 MAP2K5Q13163 448 aa6.52□□□□□ -1.37
SNHG1-210ENST00000539303 PTGDRQ13258 359 aa6.52□□□□□ -1.37
SNHG1-210ENST00000539303 IL27Q8NEV9 243 aa6.52□□□□□ -1.37
SNHG1-210ENST00000539303 RBM33Q96EV2 1170 aaKnown RBP6.52□□□□□ -1.37
SNHG1-210ENST00000539303 IRF6O14896 467 aa6.51□□□□□ -1.37
SNHG1-210ENST00000539303 FCHSD2O94868 740 aa6.51□□□□□ -1.37
SNHG1-210ENST00000539303 TSR1Q2NL82 804 aaKnown RBP6.51□□□□□ -1.37
SNHG1-210ENST00000539303 KHSRPQ92945 711 aaKnown RBP eCLIP6.51□□□□□ -1.373e-12■■□□□ 11.6
SNHG1-210ENST00000539303 PCDHGA10Q9Y5H3 936 aa6.51□□□□□ -1.37
SNHG1-210ENST00000539303 MINK1Q8N4C8 1332 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-210ENST00000539303 KDM4FA0A1W2PPD8 638 aa6.5□□□□□ -1.37
SNHG1-210ENST00000539303 EN1Q05925 392 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-210ENST00000539303 HIC1Q14526 733 aa6.5□□□□□ -1.37
SNHG1-210ENST00000539303 NPDC1Q9NQX5 325 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-210ENST00000539303 PARP9Q8IXQ6 854 aa6.49□□□□□ -1.37
SNHG1-210ENST00000539303 FAM117AQ9C073 453 aa6.49□□□□□ -1.37
SNHG1-210ENST00000539303 ZNF316A6NFI3 1004 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-210ENST00000539303 MAP3K7O43318 606 aa6.48□□□□□ -1.37
SNHG1-210ENST00000539303 PHF14O94880 888 aa6.48□□□□□ -1.37
SNHG1-210ENST00000539303 HOXB3P14651 431 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-210ENST00000539303 NUDT7P0C024 238 aa6.46□□□□□ -1.38
SNHG1-210ENST00000539303 AMHR2Q16671 573 aa6.46□□□□□ -1.38
SNHG1-210ENST00000539303 FAM161AQ3B820 660 aa6.46□□□□□ -1.38
SNHG1-210ENST00000539303 MAMSTRQ6ZN01 415 aa6.46□□□□□ -1.38
SNHG1-210ENST00000539303 C14orf37Q86TY3 774 aa6.46□□□□□ -1.38
SNHG1-210ENST00000539303 SLAIN1Q8ND83 568 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms