RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 PHLDB1Q86UU1 1377 aa15.62■□□□□ 0.09
CLPB-210ENST00000539148 PLCH2O75038 1416 aa15.62■□□□□ 0.09
CLPB-210ENST00000539148 EFCAB2Q5VUJ9 269 aa15.62■□□□□ 0.09
CLPB-210ENST00000539148 CDC42BPBQ9Y5S2 1711 aa15.62■□□□□ 0.09
CLPB-210ENST00000539148 TSPOAP1O95153 1857 aa15.61■□□□□ 0.09
CLPB-210ENST00000539148 PLEKHH2Q8IVE3 1493 aa15.61■□□□□ 0.09
CLPB-210ENST00000539148 PPARGC1BQ86YN6 1023 aaKnown RBP15.61■□□□□ 0.09
CLPB-210ENST00000539148 GPATCH8Q9UKJ3 1502 aaKnown RBP15.61■□□□□ 0.09
CLPB-210ENST00000539148 FGD6Q6ZV73 1430 aa15.58■□□□□ 0.08
CLPB-210ENST00000539148 FANCAO15360 1455 aa15.58■□□□□ 0.08
CLPB-210ENST00000539148 NEO1Q92859 1461 aa15.58■□□□□ 0.08
CLPB-210ENST00000539148 PTPN23Q9H3S7 1636 aa15.57■□□□□ 0.08
CLPB-210ENST00000539148 RSPH4AQ5TD94 716 aa15.56■□□□□ 0.08
CLPB-210ENST00000539148 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.56■□□□□ 0.08
CLPB-210ENST00000539148 ZNF777Q9ULD5 760 aaPredicted RBP15.54■□□□□ 0.08
CLPB-210ENST00000539148 RRBP1Q9P2E9 1410 aaKnown RBP15.52■□□□□ 0.08
CLPB-210ENST00000539148 TCOF1Q13428 1488 aaKnown RBP15.52■□□□□ 0.07
CLPB-210ENST00000539148 KIAA1107Q9UPP5 1409 aa15.51■□□□□ 0.07
CLPB-210ENST00000539148 FAM50AQ14320 339 aaKnown RBP15.51■□□□□ 0.07
CLPB-210ENST00000539148 CAMSAP2Q08AD1 1489 aa15.51■□□□□ 0.07
CLPB-210ENST00000539148 AKNAQ7Z591 1439 aa15.51■□□□□ 0.07
CLPB-210ENST00000539148 PPRC1Q5VV67 1664 aaKnown RBP15.51■□□□□ 0.07
CLPB-210ENST00000539148 ADGRL1O94910 1474 aa15.5■□□□□ 0.07
CLPB-210ENST00000539148 SAMD9LQ8IVG5 1584 aa15.49■□□□□ 0.07
CLPB-210ENST00000539148 ABCC1P33527 1531 aa15.48■□□□□ 0.07
CLPB-210ENST00000539148 TRIM26Q12899 539 aaPredicted RBP15.48■□□□□ 0.07
CLPB-210ENST00000539148 ARHGEF5Q12774 1597 aa15.48■□□□□ 0.07
CLPB-210ENST00000539148 TSPY4P0CV99 314 aa15.47■□□□□ 0.07
CLPB-210ENST00000539148 TSPY10P0CW01 314 aa15.47■□□□□ 0.07
CLPB-210ENST00000539148 DNMT1P26358 1616 aaKnown RBP15.46■□□□□ 0.06
CLPB-210ENST00000539148 DENND4BO75064 1496 aaPredicted RBP15.46■□□□□ 0.06
CLPB-210ENST00000539148 ZNF518AQ6AHZ1 1483 aa15.46■□□□□ 0.06
CLPB-210ENST00000539148 SCAPERQ9BY12 1400 aa15.45■□□□□ 0.06
CLPB-210ENST00000539148 SYCP2Q9BX26 1530 aa15.45■□□□□ 0.06
CLPB-210ENST00000539148 CCDC141Q6ZP82 1450 aa15.45■□□□□ 0.06
CLPB-210ENST00000539148 CROCC2H7BZ55 1655 aa15.44■□□□□ 0.06
CLPB-210ENST00000539148 ADGBQ8N7X0 1667 aa15.41■□□□□ 0.06
CLPB-210ENST00000539148 SHANK2Q9UPX8 1470 aa15.41■□□□□ 0.06
CLPB-210ENST00000539148 HNRNPMP52272 730 aaKnown RBP eCLIP15.41■□□□□ 0.06
CLPB-210ENST00000539148 KDM6BO15054 1643 aa15.41■□□□□ 0.06
CLPB-210ENST00000539148 ZNF644Q9H582 1327 aaPredicted RBP15.41■□□□□ 0.06
CLPB-210ENST00000539148 RICTORQ6R327 1708 aa15.4■□□□□ 0.06
CLPB-210ENST00000539148 DAPK1P53355 1430 aa15.4■□□□□ 0.06
CLPB-210ENST00000539148 POGZQ7Z3K3 1410 aa15.4■□□□□ 0.06
CLPB-210ENST00000539148 MYT1LQ9UL68 1186 aa15.39■□□□□ 0.05
CLPB-210ENST00000539148 MAST1Q9Y2H9 1570 aa15.39■□□□□ 0.05
CLPB-210ENST00000539148 MBD5Q9P267 1494 aa15.39■□□□□ 0.05
CLPB-210ENST00000539148 RTEL1-TNFRSF6BF6WH68 1400 aa15.38■□□□□ 0.05
CLPB-210ENST00000539148 MAGI2Q86UL8 1455 aa15.38■□□□□ 0.05
CLPB-210ENST00000539148 SPAG9O60271 1321 aaKnown RBP15.38■□□□□ 0.05
CLPB-210ENST00000539148 ACIN1Q9UKV3 1341 aaKnown RBP15.38■□□□□ 0.05
CLPB-210ENST00000539148 KDM5CP41229 1560 aa15.37■□□□□ 0.05
CLPB-210ENST00000539148 ANKRD30AQ9BXX3 1397 aa15.36■□□□□ 0.05
CLPB-210ENST00000539148 HECW2Q9P2P5 1572 aa15.36■□□□□ 0.05
CLPB-210ENST00000539148 ZMYM4Q5VZL5 1548 aa15.36■□□□□ 0.05
CLPB-210ENST00000539148 ABCC5O15440 1437 aa15.35■□□□□ 0.05
CLPB-210ENST00000539148 C9orf84Q5VXU9 1444 aa15.35■□□□□ 0.05
CLPB-210ENST00000539148 ARHGEF12Q9NZN5 1544 aa15.35■□□□□ 0.05
CLPB-210ENST00000539148 ITGAEP38570 1179 aa15.35■□□□□ 0.05
CLPB-210ENST00000539148 TRAPPC8Q9Y2L5 1435 aa15.34■□□□□ 0.05
CLPB-210ENST00000539148 MLH3Q9UHC1 1453 aa15.34■□□□□ 0.05
CLPB-210ENST00000539148 ROCK1Q13464 1354 aa15.34■□□□□ 0.05
CLPB-210ENST00000539148 ATP7AQ04656 1500 aa15.33■□□□□ 0.05
CLPB-210ENST00000539148 PLXNC1O60486 1568 aa15.33■□□□□ 0.05
CLPB-210ENST00000539148 INO80Q9ULG1 1556 aaPredicted RBP15.33■□□□□ 0.05
CLPB-210ENST00000539148 AFAP1Q8N556 730 aa15.33■□□□□ 0.04
CLPB-210ENST00000539148 ADGRL2O95490 1459 aa15.32■□□□□ 0.04
CLPB-210ENST00000539148 RAPGEF3O95398 923 aa15.31■□□□□ 0.04
CLPB-210ENST00000539148 FRMPD1Q5SYB0 1578 aa15.3■□□□□ 0.04
CLPB-210ENST00000539148 ZFYVE16Q7Z3T8 1539 aa15.3■□□□□ 0.04
CLPB-210ENST00000539148 KIDINS220Q9ULH0 1771 aa15.3■□□□□ 0.04
CLPB-210ENST00000539148 PCGF6Q9BYE7 350 aa15.29■□□□□ 0.04
CLPB-210ENST00000539148 GCC2Q8IWJ2 1684 aa15.28■□□□□ 0.04
CLPB-210ENST00000539148 DUOX2Q9NRD8 1548 aa15.28■□□□□ 0.04
CLPB-210ENST00000539148 CHIC2Q9UKJ5 165 aa15.28■□□□□ 0.04
CLPB-210ENST00000539148 NCOA1Q15788 1441 aa15.27■□□□□ 0.04
CLPB-210ENST00000539148 HFM1A2PYH4 1435 aa15.26■□□□□ 0.03
CLPB-210ENST00000539148 KIF15Q9NS87 1388 aa15.25■□□□□ 0.03
CLPB-210ENST00000539148 ARHGEF40Q8TER5 1519 aa15.25■□□□□ 0.03
CLPB-210ENST00000539148 ATP10AO60312 1499 aa15.25■□□□□ 0.03
CLPB-210ENST00000539148 COL17A1Q9UMD9 1497 aaPredicted RBP15.25■□□□□ 0.03
CLPB-210ENST00000539148 EIF2AK4Q9P2K8 1649 aaKnown RBP15.25■□□□□ 0.03
CLPB-210ENST00000539148 REREQ9P2R6 1566 aa15.24■□□□□ 0.03
CLPB-210ENST00000539148 RRP7BPQ9NSQ0 103 aa15.24■□□□□ 0.03
CLPB-210ENST00000539148 ERBINQ96RT1 1412 aa15.24■□□□□ 0.03
CLPB-210ENST00000539148 A2MP01023 1474 aa15.23■□□□□ 0.03
CLPB-210ENST00000539148 ABCA6Q8N139 1617 aa15.23■□□□□ 0.03
CLPB-210ENST00000539148 PTPRKQ15262 1439 aa15.23■□□□□ 0.03
CLPB-210ENST00000539148 DIP2CQ9Y2E4 1556 aa15.23■□□□□ 0.03
CLPB-210ENST00000539148 SETD5Q9C0A6 1442 aa15.22■□□□□ 0.03
CLPB-210ENST00000539148 ANKRD50Q9ULJ7 1429 aa15.21■□□□□ 0.03
CLPB-210ENST00000539148 KDM4FA0A1W2PPD8 638 aa15.21■□□□□ 0.03
CLPB-210ENST00000539148 HRCP23327 699 aa15.21■□□□□ 0.03
CLPB-210ENST00000539148 DHX29Q7Z478 1369 aaKnown RBP15.21■□□□□ 0.02
CLPB-210ENST00000539148 BCORL1Q5H9F3 1711 aa15.2■□□□□ 0.02
CLPB-210ENST00000539148 NAIPQ13075 1403 aa15.19■□□□□ 0.02
CLPB-210ENST00000539148 YEATS2Q9ULM3 1422 aa15.17■□□□□ 0.02
CLPB-210ENST00000539148 AGLP35573 1532 aa15.17■□□□□ 0.02
CLPB-210ENST00000539148 KANK1Q14678 1352 aa15.16■□□□□ 0.02
CLPB-210ENST00000539148 PPP6R1Q9UPN7 881 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms