RNA–Protein interactions for RNA: ENST00000538501.5

PPME1-204, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 744 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-204ENST00000538501 TMEM121BQ9BXQ6 578 aaPredicted RBP12.89□□□□□ -0.35
PPME1-204ENST00000538501 SEC24BO95487 1268 aa12.88□□□□□ -0.35
PPME1-204ENST00000538501 L3MBTL3Q96JM7 780 aaPredicted RBP12.88□□□□□ -0.35
PPME1-204ENST00000538501 CRISPLD2Q9H0B8 497 aa12.88□□□□□ -0.35
PPME1-204ENST00000538501 G3V3G9 751 aa12.87□□□□□ -0.35
PPME1-204ENST00000538501 MICALL2Q8IY33 904 aa12.87□□□□□ -0.35
PPME1-204ENST00000538501 PELP1Q8IZL8 1130 aaKnown RBP12.87□□□□□ -0.35
PPME1-204ENST00000538501 BOLA1Q9Y3E2 137 aa12.87□□□□□ -0.35
PPME1-204ENST00000538501 CECR2Q9BXF3 1484 aa12.86□□□□□ -0.35
PPME1-204ENST00000538501 MFSD10Q14728 455 aa12.86□□□□□ -0.35
PPME1-204ENST00000538501 NCKAP5LQ9HCH0 1330 aa12.86□□□□□ -0.35
PPME1-204ENST00000538501 DPY19L2Q6NUT2 758 aa12.84□□□□□ -0.35
PPME1-204ENST00000538501 METRNQ9UJH8 293 aa12.83□□□□□ -0.36
PPME1-204ENST00000538501 POTEIP0CG38 1075 aa12.82□□□□□ -0.36
PPME1-204ENST00000538501 NBR1Q14596 966 aa12.82□□□□□ -0.36
PPME1-204ENST00000538501 DDX27Q96GQ7 796 aaKnown RBP12.81□□□□□ -0.36
PPME1-204ENST00000538501 GPHNQ9NQX3 736 aaPredicted RBP12.81□□□□□ -0.36
PPME1-204ENST00000538501 BAZ1AQ9NRL2 1556 aaPredicted RBP12.81□□□□□ -0.36
PPME1-204ENST00000538501 EIF4G1Q04637 1599 aaKnown RBP12.79□□□□□ -0.36
PPME1-204ENST00000538501 E2F4Q16254 413 aa12.79□□□□□ -0.36
PPME1-204ENST00000538501 LARP6Q9BRS8 491 aaKnown RBP12.79□□□□□ -0.36
PPME1-204ENST00000538501 COLQQ9Y215 455 aaPredicted RBP12.79□□□□□ -0.36
PPME1-204ENST00000538501 KCNV2Q8TDN2 545 aa12.76□□□□□ -0.37
PPME1-204ENST00000538501 ARHGEF1Q92888 912 aaKnown RBP12.76□□□□□ -0.37
PPME1-204ENST00000538501 TMC2Q8TDI7 906 aa12.75□□□□□ -0.37
PPME1-204ENST00000538501 SMARCA4P51532 1647 aa12.74□□□□□ -0.37
PPME1-204ENST00000538501 MROH2BQ7Z745 1585 aa12.74□□□□□ -0.37
PPME1-204ENST00000538501 POTEFA5A3E0 1075 aa12.74□□□□□ -0.37
PPME1-204ENST00000538501 ARIH1Q9Y4X5 557 aaPredicted RBP12.74□□□□□ -0.37
PPME1-204ENST00000538501 SUPT5HO00267 1087 aaKnown RBP12.73□□□□□ -0.37
PPME1-204ENST00000538501 CAMK2BQ13554 666 aa12.73□□□□□ -0.37
PPME1-204ENST00000538501 RSF1Q96T23 1441 aaPredicted RBP12.72□□□□□ -0.37
PPME1-204ENST00000538501 FOXK1P85037 733 aa12.71□□□□□ -0.37
PPME1-204ENST00000538501 PPP1R15BQ5SWA1 713 aa12.71□□□□□ -0.37
PPME1-204ENST00000538501 KIF3CO14782 793 aa12.7□□□□□ -0.38
PPME1-204ENST00000538501 C3orf67Q6ZVT6 689 aa12.68□□□□□ -0.38
PPME1-204ENST00000538501 CC2D2AQ9P2K1 1620 aa12.67□□□□□ -0.38
PPME1-204ENST00000538501 ATAD2BQ9ULI0 1458 aa12.65□□□□□ -0.38
PPME1-204ENST00000538501 SMARCA2P51531 1590 aa12.65□□□□□ -0.38
PPME1-204ENST00000538501 C2orf72A6NCS6 295 aa12.64□□□□□ -0.39
PPME1-204ENST00000538501 DSG2Q14126 1118 aa12.64□□□□□ -0.39
PPME1-204ENST00000538501 NCAPD3P42695 1498 aa12.62□□□□□ -0.39
PPME1-204ENST00000538501 PLPP6Q8IY26 295 aa12.59□□□□□ -0.39
PPME1-204ENST00000538501 PEG3Q9GZU2 1588 aa12.59□□□□□ -0.39
PPME1-204ENST00000538501 BAZ1BQ9UIG0 1483 aaKnown RBP12.59□□□□□ -0.39
PPME1-204ENST00000538501 WIZO95785 1651 aa12.58□□□□□ -0.4
PPME1-204ENST00000538501 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.58□□□□□ -0.4
PPME1-204ENST00000538501 TULP1O00294 542 aaPredicted RBP12.57□□□□□ -0.4
PPME1-204ENST00000538501 TMEM92Q6UXU6 159 aa12.57□□□□□ -0.4
PPME1-204ENST00000538501 HMGXB3Q12766 1538 aa12.53□□□□□ -0.4
PPME1-204ENST00000538501 SPDYE16A6NNV3 312 aaPredicted RBP12.53□□□□□ -0.4
PPME1-204ENST00000538501 MAMSTRQ6ZN01 415 aa12.53□□□□□ -0.4
PPME1-204ENST00000538501 EMILIN3Q9NT22 766 aa12.52□□□□□ -0.41
PPME1-204ENST00000538501 TESPA1A2RU30 521 aaPredicted RBP12.51□□□□□ -0.41
PPME1-204ENST00000538501 PDIA6Q15084 440 aa12.51□□□□□ -0.41
PPME1-204ENST00000538501 SLC34A2O95436 690 aa12.5□□□□□ -0.41
PPME1-204ENST00000538501 SMYD5Q6GMV2 418 aa12.5□□□□□ -0.41
PPME1-204ENST00000538501 TOP2AP11388 1531 aaKnown RBP12.49□□□□□ -0.41
PPME1-204ENST00000538501 OXER1Q8TDS5 423 aa12.47□□□□□ -0.41
PPME1-204ENST00000538501 SCUBE2Q9NQ36 999 aa12.47□□□□□ -0.41
PPME1-204ENST00000538501 DPYSL4O14531 572 aa12.46□□□□□ -0.41
PPME1-204ENST00000538501 SEMA3EO15041 775 aa12.46□□□□□ -0.41
PPME1-204ENST00000538501 PTCD2Q8WV60 388 aaKnown RBP12.45□□□□□ -0.42
PPME1-204ENST00000538501 TBC1D12O60347 775 aa12.44□□□□□ -0.42
PPME1-204ENST00000538501 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.44□□□□□ -0.42
PPME1-204ENST00000538501 MAP3K9P80192 1104 aa12.43□□□□□ -0.42
PPME1-204ENST00000538501 ZNF316A6NFI3 1004 aaPredicted RBP12.42□□□□□ -0.42
PPME1-204ENST00000538501 POTEJP0CG39 1038 aa12.41□□□□□ -0.42
PPME1-204ENST00000538501 POTEB2H3BUK9 544 aa12.4□□□□□ -0.42
PPME1-204ENST00000538501 TPRNQ4KMQ1 711 aa12.4□□□□□ -0.42
PPME1-204ENST00000538501 LMOD2Q6P5Q4 547 aa12.4□□□□□ -0.42
PPME1-204ENST00000538501 CCDC88BA6NC98 1476 aa12.39□□□□□ -0.43
PPME1-204ENST00000538501 PTGER2P43116 358 aa12.37□□□□□ -0.43
PPME1-204ENST00000538501 UPF1Q92900 1129 aaKnown RBP eCLIP12.36□□□□□ -0.43
PPME1-204ENST00000538501 DOK7Q18PE1 504 aa12.35□□□□□ -0.43
PPME1-204ENST00000538501 SLAIN1Q8ND83 568 aa12.35□□□□□ -0.43
PPME1-204ENST00000538501 ZSWIM6Q9HCJ5 1215 aa12.35□□□□□ -0.43
PPME1-204ENST00000538501 RIMBP2O15034 1052 aa12.33□□□□□ -0.44
PPME1-204ENST00000538501 EVI5O60447 810 aa12.32□□□□□ -0.44
PPME1-204ENST00000538501 ANO8Q9HCE9 1232 aaPredicted RBP12.31□□□□□ -0.44
PPME1-204ENST00000538501 CADPSQ9ULU8 1353 aa12.3□□□□□ -0.44
PPME1-204ENST00000538501 SNPHO15079 494 aa12.3□□□□□ -0.44
PPME1-204ENST00000538501 MLLT3P42568 568 aaPredicted RBP12.3□□□□□ -0.44
PPME1-204ENST00000538501 PCDHGA4Q9Y5G9 962 aa12.3□□□□□ -0.44
PPME1-204ENST00000538501 PRKCSHP14314 528 aaPredicted RBP12.27□□□□□ -0.45
PPME1-204ENST00000538501 HOXB3P14651 431 aaPredicted RBP12.26□□□□□ -0.45
PPME1-204ENST00000538501 CFTRP13569 1480 aa12.24□□□□□ -0.45
PPME1-204ENST00000538501 KDM4FA0A1W2PPD8 638 aa12.23□□□□□ -0.45
PPME1-204ENST00000538501 PHF14O94880 888 aa12.22□□□□□ -0.45
PPME1-204ENST00000538501 LHX8Q68G74 356 aa12.22□□□□□ -0.45
PPME1-204ENST00000538501 ZNF710Q8N1W2 664 aa12.22□□□□□ -0.45
PPME1-204ENST00000538501 EPAS1Q99814 870 aa12.22□□□□□ -0.45
PPME1-204ENST00000538501 PDS5BQ9NTI5 1447 aa12.21□□□□□ -0.45
PPME1-204ENST00000538501 GPIHBP1Q8IV16 184 aa12.21□□□□□ -0.45
PPME1-204ENST00000538501 ZC3H15Q8WU90 426 aaKnown RBP12.21□□□□□ -0.45
PPME1-204ENST00000538501 NESP48681 1621 aa12.21□□□□□ -0.46
PPME1-204ENST00000538501 LAMC3Q9Y6N6 1575 aa12.21□□□□□ -0.46
PPME1-204ENST00000538501 GRXCR2A6NFK2 248 aa12.2□□□□□ -0.46
PPME1-204ENST00000538501 OSBPP22059 807 aa12.2□□□□□ -0.46
PPME1-204ENST00000538501 OTUD5Q96G74 571 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms