RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-215ENST00000537551 KDM4FA0A1W2PPD8 638 aa36.73■■■■□ 3.47
CHFR-215ENST00000537551 CDC42BPBQ9Y5S2 1711 aa36.72■■■■□ 3.47
CHFR-215ENST00000537551 RICTORQ6R327 1708 aa36.71■■■■□ 3.47
CHFR-215ENST00000537551 PREX2Q70Z35 1606 aa36.71■■■■□ 3.47
CHFR-215ENST00000537551 EHBP1L1Q8N3D4 1523 aa36.7■■■■□ 3.47
CHFR-215ENST00000537551 CCNB3Q8WWL7 1395 aa36.69■■■■□ 3.46
CHFR-215ENST00000537551 ZNF777Q9ULD5 760 aaPredicted RBP36.68■■■■□ 3.46
CHFR-215ENST00000537551 CDC42BPAQ5VT25 1732 aa36.67■■■■□ 3.46
CHFR-215ENST00000537551 GPATCH8Q9UKJ3 1502 aaKnown RBP36.66■■■■□ 3.46
CHFR-215ENST00000537551 POGZQ7Z3K3 1410 aa36.66■■■■□ 3.46
CHFR-215ENST00000537551 TIAM1Q13009 1591 aa36.66■■■■□ 3.46
CHFR-215ENST00000537551 CFDP1Q9UEE9 299 aaPredicted RBP36.63■■■■□ 3.45
CHFR-215ENST00000537551 APLP2Q06481 763 aa36.6■■■■□ 3.45
CHFR-215ENST00000537551 AFAP1Q8N556 730 aa36.59■■■■□ 3.45
CHFR-215ENST00000537551 ZMYM4Q5VZL5 1548 aa36.59■■■■□ 3.45
CHFR-215ENST00000537551 MYT1LQ9UL68 1186 aa36.57■■■■□ 3.44
CHFR-215ENST00000537551 ZNF518AQ6AHZ1 1483 aa36.56■■■■□ 3.44
CHFR-215ENST00000537551 MAGI2Q86UL8 1455 aa36.56■■■■□ 3.44
CHFR-215ENST00000537551 ARID4BQ4LE39 1312 aaPredicted RBP36.55■■■■□ 3.44
CHFR-215ENST00000537551 LRRC9Q6ZRR7 1453 aa36.54■■■■□ 3.44
CHFR-215ENST00000537551 ZFYVE16Q7Z3T8 1539 aa36.54■■■■□ 3.44
CHFR-215ENST00000537551 ABCC1P33527 1531 aa36.53■■■■□ 3.44
CHFR-215ENST00000537551 MAP3K1Q13233 1512 aa36.53■■■■□ 3.44
CHFR-215ENST00000537551 ARHGEF40Q8TER5 1519 aa36.53■■■■□ 3.44
CHFR-215ENST00000537551 YEATS2Q9ULM3 1422 aa36.52■■■■□ 3.44
CHFR-215ENST00000537551 SUPT6HQ7KZ85 1726 aaKnown RBP36.52■■■■□ 3.44
CHFR-215ENST00000537551 NCOA2Q15596 1464 aa36.51■■■■□ 3.44
CHFR-215ENST00000537551 KANK4Q5T7N3 995 aaPredicted RBP36.51■■■■□ 3.44
CHFR-215ENST00000537551 ARHGEF12Q9NZN5 1544 aa36.5■■■■□ 3.43
CHFR-215ENST00000537551 TRAPPC8Q9Y2L5 1435 aa36.49■■■■□ 3.43
CHFR-215ENST00000537551 SAMD9LQ8IVG5 1584 aa36.48■■■■□ 3.43
CHFR-215ENST00000537551 HNRNPMP52272 730 aaKnown RBP eCLIP36.47■■■■□ 3.43
CHFR-215ENST00000537551 ITSN2Q9NZM3 1697 aa36.45■■■■□ 3.43
CHFR-215ENST00000537551 KDM5CP41229 1560 aa36.44■■■■□ 3.42
CHFR-215ENST00000537551 PLEKHH2Q8IVE3 1493 aa36.43■■■■□ 3.42
CHFR-215ENST00000537551 SYCP2Q9BX26 1530 aa36.41■■■■□ 3.42
CHFR-215ENST00000537551 ZNF644Q9H582 1327 aaPredicted RBP36.4■■■■□ 3.42
CHFR-215ENST00000537551 KIAA1107Q9UPP5 1409 aa36.4■■■■□ 3.42
CHFR-215ENST00000537551 ATP10AO60312 1499 aa36.39■■■■□ 3.42
CHFR-215ENST00000537551 HECW2Q9P2P5 1572 aa36.37■■■■□ 3.41
CHFR-215ENST00000537551 MLH3Q9UHC1 1453 aa36.37■■■■□ 3.41
CHFR-215ENST00000537551 C9orf84Q5VXU9 1444 aa36.34■■■■□ 3.41
CHFR-215ENST00000537551 SPAG9O60271 1321 aaKnown RBP36.33■■■■□ 3.41
CHFR-215ENST00000537551 MLECQ14165 292 aa36.29■■■■□ 3.4
CHFR-215ENST00000537551 BCORL1Q5H9F3 1711 aa36.28■■■■□ 3.4
CHFR-215ENST00000537551 DIP2CQ9Y2E4 1556 aa36.25■■■■□ 3.39
CHFR-215ENST00000537551 ADAMTSL3P82987 1691 aa36.25■■■■□ 3.39
CHFR-215ENST00000537551 CAMSAP2Q08AD1 1489 aa36.24■■■■□ 3.39
CHFR-215ENST00000537551 SIGLEC1Q9BZZ2 1709 aa36.23■■■■□ 3.39
CHFR-215ENST00000537551 ABCA6Q8N139 1617 aa36.23■■■■□ 3.39
CHFR-215ENST00000537551 KIDINS220Q9ULH0 1771 aa36.22■■■■□ 3.39
CHFR-215ENST00000537551 MBD5Q9P267 1494 aa36.22■■■■□ 3.39
CHFR-215ENST00000537551 MYOM3Q5VTT5 1437 aa36.2■■■■□ 3.39
CHFR-215ENST00000537551 RSPH4AQ5TD94 716 aa36.19■■■■□ 3.38
CHFR-215ENST00000537551 MADDQ8WXG6 1647 aa36.16■■■■□ 3.38
CHFR-215ENST00000537551 ATP7AQ04656 1500 aa36.16■■■■□ 3.38
CHFR-215ENST00000537551 MIA2Q96PC5 1412 aa36.15■■■■□ 3.38
CHFR-215ENST00000537551 PTPRMP28827 1452 aa36.13■■■■□ 3.37
CHFR-215ENST00000537551 REREQ9P2R6 1566 aa36.13■■■■□ 3.37
CHFR-215ENST00000537551 CCDC141Q6ZP82 1450 aa36.12■■■■□ 3.37
CHFR-215ENST00000537551 INO80Q9ULG1 1556 aaPredicted RBP36.1■■■■□ 3.37
CHFR-215ENST00000537551 TSPY4P0CV99 314 aa36.09■■■■□ 3.37
CHFR-215ENST00000537551 TSPY10P0CW01 314 aa36.09■■■■□ 3.37
CHFR-215ENST00000537551 RIMS1Q86UR5 1692 aaKnown RBP36.07■■■■□ 3.37
CHFR-215ENST00000537551 RTEL1-TNFRSF6BF6WH68 1400 aa36.07■■■■□ 3.36
CHFR-215ENST00000537551 PLPPR3Q6T4P5 718 aa36.06■■■■□ 3.36
CHFR-215ENST00000537551 AGLP35573 1532 aa36.05■■■■□ 3.36
CHFR-215ENST00000537551 ARHGEF5Q12774 1597 aa36.04■■■■□ 3.36
CHFR-215ENST00000537551 A2MP01023 1474 aa36.03■■■■□ 3.36
CHFR-215ENST00000537551 FER1L4A9Z1Z3 1794 aa36■■■■□ 3.35
CHFR-215ENST00000537551 ESF1Q9H501 851 aaKnown RBP36■■■■□ 3.35
CHFR-215ENST00000537551 FGD6Q6ZV73 1430 aa35.98■■■■□ 3.35
CHFR-215ENST00000537551 PTPN23Q9H3S7 1636 aa35.96■■■■□ 3.35
CHFR-215ENST00000537551 ADGBQ8N7X0 1667 aa35.95■■■■□ 3.35
CHFR-215ENST00000537551 PPARGC1BQ86YN6 1023 aaKnown RBP35.92■■■■□ 3.34
CHFR-215ENST00000537551 DHX29Q7Z478 1369 aaKnown RBP35.91■■■■□ 3.34
CHFR-215ENST00000537551 PLXNC1O60486 1568 aa35.9■■■■□ 3.34
CHFR-215ENST00000537551 GGT6Q6P531 493 aa35.89■■■■□ 3.34
CHFR-215ENST00000537551 CEBPAP49715 358 aaPredicted RBP35.87■■■■□ 3.33
CHFR-215ENST00000537551 TCOF1Q13428 1488 aaKnown RBP35.86■■■■□ 3.33
CHFR-215ENST00000537551 FAM50AQ14320 339 aaKnown RBP35.85■■■■□ 3.33
CHFR-215ENST00000537551 MAST1Q9Y2H9 1570 aa35.84■■■■□ 3.33
CHFR-215ENST00000537551 ABCC5O15440 1437 aa35.83■■■■□ 3.33
CHFR-215ENST00000537551 KIF3BO15066 747 aa35.82■■■■□ 3.32
CHFR-215ENST00000537551 DAPK1P53355 1430 aa35.79■■■■□ 3.32
CHFR-215ENST00000537551 CNTLNQ9NXG0 1405 aa35.79■■■■□ 3.32
CHFR-215ENST00000537551 PPP6R1Q9UPN7 881 aa35.75■■■■□ 3.31
CHFR-215ENST00000537551 DNMT1P26358 1616 aaKnown RBP35.75■■■■□ 3.31
CHFR-215ENST00000537551 CHIC2Q9UKJ5 165 aa35.74■■■■□ 3.31
CHFR-215ENST00000537551 SHANK2Q9UPX8 1470 aa35.73■■■■□ 3.31
CHFR-215ENST00000537551 RRP7BPQ9NSQ0 103 aa35.71■■■■□ 3.31
CHFR-215ENST00000537551 CROCC2H7BZ55 1655 aa35.71■■■■□ 3.31
CHFR-215ENST00000537551 ZMYM3Q14202 1370 aa35.69■■■■□ 3.3
CHFR-215ENST00000537551 C3P01024 1663 aa35.68■■■■□ 3.3
CHFR-215ENST00000537551 KIF15Q9NS87 1388 aa35.66■■■■□ 3.3
CHFR-215ENST00000537551 CLTCQ00610 1675 aaKnown RBP35.65■■■■□ 3.3
CHFR-215ENST00000537551 ANKRD30AQ9BXX3 1397 aa35.64■■■■□ 3.3
CHFR-215ENST00000537551 DUOX2Q9NRD8 1548 aa35.64■■■■□ 3.3
CHFR-215ENST00000537551 LMTK3Q96Q04 1460 aa35.64■■■■□ 3.3
CHFR-215ENST00000537551 MROH2AA6NES4 1674 aa35.62■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms