RNA–Protein interactions for RNA: ENST00000536452.1

CYB561A3-206, Transcript of cytochrome b561 family member A3, humanhuman

TSL 2

Gene CYB561A3, Length 1,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-206ENST00000536452 RAPGEF3O95398 923 aa20.23■□□□□ 0.83
CYB561A3-206ENST00000536452 ARHGAP5Q13017 1502 aa20.21■□□□□ 0.83
CYB561A3-206ENST00000536452 DENND4BO75064 1496 aaPredicted RBP20.2■□□□□ 0.82
CYB561A3-206ENST00000536452 ADGRL1O94910 1474 aa20.2■□□□□ 0.82
CYB561A3-206ENST00000536452 ZEB1P37275 1124 aaPredicted RBP20.19■□□□□ 0.82
CYB561A3-206ENST00000536452 ZMYM4Q5VZL5 1548 aa20.17■□□□□ 0.82
CYB561A3-206ENST00000536452 EHBP1L1Q8N3D4 1523 aa20.16■□□□□ 0.82
CYB561A3-206ENST00000536452 ARHGEF40Q8TER5 1519 aa20.16■□□□□ 0.82
CYB561A3-206ENST00000536452 KDM4FA0A1W2PPD8 638 aa20.16■□□□□ 0.82
CYB561A3-206ENST00000536452 TIAM1Q13009 1591 aa20.16■□□□□ 0.82
CYB561A3-206ENST00000536452 POGZQ7Z3K3 1410 aa20.15■□□□□ 0.82
CYB561A3-206ENST00000536452 SCAPERQ9BY12 1400 aa20.15■□□□□ 0.82
CYB561A3-206ENST00000536452 MTUS2Q5JR59 1369 aa20.14■□□□□ 0.81
CYB561A3-206ENST00000536452 EFCAB2Q5VUJ9 269 aa20.13■□□□□ 0.81
CYB561A3-206ENST00000536452 ITSN2Q9NZM3 1697 aa20.12■□□□□ 0.81
CYB561A3-206ENST00000536452 ABCC1P33527 1531 aa20.12■□□□□ 0.81
CYB561A3-206ENST00000536452 APLP2Q06481 763 aa20.12■□□□□ 0.81
CYB561A3-206ENST00000536452 AEBP2Q6ZN18 517 aaPredicted RBP20.12■□□□□ 0.81
CYB561A3-206ENST00000536452 GPATCH8Q9UKJ3 1502 aaKnown RBP20.11■□□□□ 0.81
CYB561A3-206ENST00000536452 SAMD9LQ8IVG5 1584 aa20.1■□□□□ 0.81
CYB561A3-206ENST00000536452 SIGLEC1Q9BZZ2 1709 aa20.1■□□□□ 0.81
CYB561A3-206ENST00000536452 KDM5CP41229 1560 aa20.09■□□□□ 0.81
CYB561A3-206ENST00000536452 ZFYVE16Q7Z3T8 1539 aa20.09■□□□□ 0.81
CYB561A3-206ENST00000536452 YEATS2Q9ULM3 1422 aa20.08■□□□□ 0.81
CYB561A3-206ENST00000536452 ARHGEF12Q9NZN5 1544 aa20.08■□□□□ 0.81
CYB561A3-206ENST00000536452 SUPT6HQ7KZ85 1726 aaKnown RBP20.08■□□□□ 0.8
CYB561A3-206ENST00000536452 ZNF518AQ6AHZ1 1483 aa20.07■□□□□ 0.8
CYB561A3-206ENST00000536452 MAGI2Q86UL8 1455 aa20.04■□□□□ 0.8
CYB561A3-206ENST00000536452 SYCP2Q9BX26 1530 aa20.04■□□□□ 0.8
CYB561A3-206ENST00000536452 HECW2Q9P2P5 1572 aa20.04■□□□□ 0.8
CYB561A3-206ENST00000536452 CCNB3Q8WWL7 1395 aa20.04■□□□□ 0.8
CYB561A3-206ENST00000536452 NCOA2Q15596 1464 aa20.03■□□□□ 0.8
CYB561A3-206ENST00000536452 LRRC9Q6ZRR7 1453 aa20.03■□□□□ 0.8
CYB561A3-206ENST00000536452 BCORL1Q5H9F3 1711 aa20.03■□□□□ 0.8
CYB561A3-206ENST00000536452 TRAPPC8Q9Y2L5 1435 aa20.03■□□□□ 0.8
CYB561A3-206ENST00000536452 MAP3K1Q13233 1512 aa20.02■□□□□ 0.8
CYB561A3-206ENST00000536452 ADAMTSL3P82987 1691 aa20.01■□□□□ 0.79
CYB561A3-206ENST00000536452 AFAP1Q8N556 730 aa20.01■□□□□ 0.79
CYB561A3-206ENST00000536452 ABCA6Q8N139 1617 aa20■□□□□ 0.79
CYB561A3-206ENST00000536452 ZNF777Q9ULD5 760 aaPredicted RBP19.99■□□□□ 0.79
CYB561A3-206ENST00000536452 DIP2CQ9Y2E4 1556 aa19.99■□□□□ 0.79
CYB561A3-206ENST00000536452 KIDINS220Q9ULH0 1771 aa19.98■□□□□ 0.79
CYB561A3-206ENST00000536452 CFDP1Q9UEE9 299 aaPredicted RBP19.97■□□□□ 0.79
CYB561A3-206ENST00000536452 MADDQ8WXG6 1647 aa19.96■□□□□ 0.79
CYB561A3-206ENST00000536452 KANK4Q5T7N3 995 aaPredicted RBP19.96■□□□□ 0.79
CYB561A3-206ENST00000536452 MLH3Q9UHC1 1453 aa19.95■□□□□ 0.78
CYB561A3-206ENST00000536452 ATP10AO60312 1499 aa19.94■□□□□ 0.78
CYB561A3-206ENST00000536452 PLEKHH2Q8IVE3 1493 aa19.93■□□□□ 0.78
CYB561A3-206ENST00000536452 C9orf84Q5VXU9 1444 aa19.93■□□□□ 0.78
CYB561A3-206ENST00000536452 ZNF644Q9H582 1327 aaPredicted RBP19.93■□□□□ 0.78
CYB561A3-206ENST00000536452 KIAA1107Q9UPP5 1409 aa19.93■□□□□ 0.78
CYB561A3-206ENST00000536452 ARID4BQ4LE39 1312 aaPredicted RBP19.93■□□□□ 0.78
CYB561A3-206ENST00000536452 INO80Q9ULG1 1556 aaPredicted RBP19.92■□□□□ 0.78
CYB561A3-206ENST00000536452 HNRNPMP52272 730 aaKnown RBP eCLIP19.92■□□□□ 0.78
CYB561A3-206ENST00000536452 RIMS1Q86UR5 1692 aaKnown RBP19.91■□□□□ 0.78
CYB561A3-206ENST00000536452 REREQ9P2R6 1566 aa19.91■□□□□ 0.78
CYB561A3-206ENST00000536452 CAMSAP2Q08AD1 1489 aa19.9■□□□□ 0.78
CYB561A3-206ENST00000536452 MBD5Q9P267 1494 aa19.89■□□□□ 0.78
CYB561A3-206ENST00000536452 ATP7AQ04656 1500 aa19.89■□□□□ 0.77
CYB561A3-206ENST00000536452 FER1L4A9Z1Z3 1794 aa19.89■□□□□ 0.77
CYB561A3-206ENST00000536452 MYT1LQ9UL68 1186 aa19.87■□□□□ 0.77
CYB561A3-206ENST00000536452 PTPRMP28827 1452 aa19.86■□□□□ 0.77
CYB561A3-206ENST00000536452 CCER1Q8TC90 406 aaPredicted RBP19.86■□□□□ 0.77
CYB561A3-206ENST00000536452 MYOM3Q5VTT5 1437 aa19.84■□□□□ 0.77
CYB561A3-206ENST00000536452 SPAG9O60271 1321 aaKnown RBP19.83■□□□□ 0.77
CYB561A3-206ENST00000536452 MLECQ14165 292 aa19.82■□□□□ 0.76
CYB561A3-206ENST00000536452 ARHGEF5Q12774 1597 aa19.82■□□□□ 0.76
CYB561A3-206ENST00000536452 ADGBQ8N7X0 1667 aa19.81■□□□□ 0.76
CYB561A3-206ENST00000536452 CCDC141Q6ZP82 1450 aa19.81■□□□□ 0.76
CYB561A3-206ENST00000536452 AGLP35573 1532 aa19.81■□□□□ 0.76
CYB561A3-206ENST00000536452 PLXNC1O60486 1568 aa19.81■□□□□ 0.76
CYB561A3-206ENST00000536452 MIA2Q96PC5 1412 aa19.78■□□□□ 0.76
CYB561A3-206ENST00000536452 PTPN23Q9H3S7 1636 aa19.76■□□□□ 0.75
CYB561A3-206ENST00000536452 A2MP01023 1474 aa19.75■□□□□ 0.75
CYB561A3-206ENST00000536452 RTEL1-TNFRSF6BF6WH68 1400 aa19.74■□□□□ 0.75
CYB561A3-206ENST00000536452 CROCC2H7BZ55 1655 aa19.73■□□□□ 0.75
CYB561A3-206ENST00000536452 FGD6Q6ZV73 1430 aa19.72■□□□□ 0.75
CYB561A3-206ENST00000536452 MAST1Q9Y2H9 1570 aa19.72■□□□□ 0.75
CYB561A3-206ENST00000536452 C3P01024 1663 aa19.7■□□□□ 0.74
CYB561A3-206ENST00000536452 RRBP1Q9P2E9 1410 aaKnown RBP19.7■□□□□ 0.74
CYB561A3-206ENST00000536452 TCOF1Q13428 1488 aaKnown RBP19.69■□□□□ 0.74
CYB561A3-206ENST00000536452 PLPPR3Q6T4P5 718 aa19.68■□□□□ 0.74
CYB561A3-206ENST00000536452 DNMT1P26358 1616 aaKnown RBP19.68■□□□□ 0.74
CYB561A3-206ENST00000536452 RSPH4AQ5TD94 716 aa19.67■□□□□ 0.74
CYB561A3-206ENST00000536452 CLTCQ00610 1675 aaKnown RBP19.66■□□□□ 0.74
CYB561A3-206ENST00000536452 MROH2AA6NES4 1674 aa19.66■□□□□ 0.74
CYB561A3-206ENST00000536452 LMTK3Q96Q04 1460 aa19.65■□□□□ 0.74
CYB561A3-206ENST00000536452 DHX29Q7Z478 1369 aaKnown RBP19.64■□□□□ 0.73
CYB561A3-206ENST00000536452 ABCC5O15440 1437 aa19.63■□□□□ 0.73
CYB561A3-206ENST00000536452 SHANK2Q9UPX8 1470 aa19.63■□□□□ 0.73
CYB561A3-206ENST00000536452 TSPY4P0CV99 314 aa19.62■□□□□ 0.73
CYB561A3-206ENST00000536452 TSPY10P0CW01 314 aa19.62■□□□□ 0.73
CYB561A3-206ENST00000536452 CEBPAP49715 358 aaPredicted RBP19.62■□□□□ 0.73
CYB561A3-206ENST00000536452 PREX1Q8TCU6 1659 aa19.62■□□□□ 0.73
CYB561A3-206ENST00000536452 DAPK1P53355 1430 aa19.62■□□□□ 0.73
CYB561A3-206ENST00000536452 CNTLNQ9NXG0 1405 aa19.6■□□□□ 0.73
CYB561A3-206ENST00000536452 EIF2AK4Q9P2K8 1649 aaKnown RBP19.58■□□□□ 0.73
CYB561A3-206ENST00000536452 GGT6Q6P531 493 aa19.58■□□□□ 0.72
CYB561A3-206ENST00000536452 RNF17Q9BXT8 1623 aaKnown RBP19.57■□□□□ 0.72
CYB561A3-206ENST00000536452 ESF1Q9H501 851 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms