RNA–Protein interactions for RNA: ENST00000536256.3

ABCC4-206, Transcript of ATP binding cassette subfamily C member 4, humanhuman

TSL 2 BASIC

Gene ABCC4, Length 2,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4-206ENST00000536256 ABCC5O15440 1437 aa18.57■□□□□ 0.56
ABCC4-206ENST00000536256 FBLN2P98095 1184 aa18.56■□□□□ 0.56
ABCC4-206ENST00000536256 CHMP7Q8WUX9 453 aaPredicted RBP18.55■□□□□ 0.56
ABCC4-206ENST00000536256 TSHZ2Q9NRE2 1034 aa18.55■□□□□ 0.56
ABCC4-206ENST00000536256 RAPGEF6Q8TEU7 1601 aa18.55■□□□□ 0.56
ABCC4-206ENST00000536256 EIF4G3O43432 1585 aaKnown RBP18.55■□□□□ 0.56
ABCC4-206ENST00000536256 ROCK1Q13464 1354 aa18.55■□□□□ 0.56
ABCC4-206ENST00000536256 SLC4A1APQ9BWU0 796 aaKnown RBP18.54■□□□□ 0.56
ABCC4-206ENST00000536256 NEFLP07196 543 aa18.53■□□□□ 0.56
ABCC4-206ENST00000536256 PRG4Q92954 1404 aaPredicted RBP18.53■□□□□ 0.56
ABCC4-206ENST00000536256 DNMT1P26358 1616 aaKnown RBP18.53■□□□□ 0.56
ABCC4-206ENST00000536256 ANKRD30BQ9BXX2 1392 aa18.52■□□□□ 0.56
ABCC4-206ENST00000536256 CFDP1Q9UEE9 299 aaPredicted RBP18.51■□□□□ 0.55
ABCC4-206ENST00000536256 ZNF777Q9ULD5 760 aaPredicted RBP18.51■□□□□ 0.55
ABCC4-206ENST00000536256 ERCC6Q03468 1493 aa18.5■□□□□ 0.55
ABCC4-206ENST00000536256 PLB1Q6P1J6 1458 aa18.5■□□□□ 0.55
ABCC4-206ENST00000536256 C11orf95C9JLR9 678 aaPredicted RBP18.5■□□□□ 0.55
ABCC4-206ENST00000536256 NBPF8Q3BBV2 869 aa18.5■□□□□ 0.55
ABCC4-206ENST00000536256 HNRNPUQ00839 825 aaKnown RBP eCLIP18.49■□□□□ 0.55
ABCC4-206ENST00000536256 RPRD2Q5VT52 1461 aaKnown RBP18.48■□□□□ 0.55
ABCC4-206ENST00000536256 TROQ12816 1431 aaPredicted RBP18.47■□□□□ 0.55
ABCC4-206ENST00000536256 CNGB1Q14028 1251 aaPredicted RBP18.46■□□□□ 0.55
ABCC4-206ENST00000536256 CEP170Q5SW79 1584 aa18.45■□□□□ 0.54
ABCC4-206ENST00000536256 JPH4Q96JJ6 628 aa18.45■□□□□ 0.54
ABCC4-206ENST00000536256 CAMSAP2Q08AD1 1489 aa18.45■□□□□ 0.54
ABCC4-206ENST00000536256 MAGI1Q96QZ7 1491 aaPredicted RBP18.45■□□□□ 0.54
ABCC4-206ENST00000536256 SYNJ2O15056 1496 aa18.43■□□□□ 0.54
ABCC4-206ENST00000536256 TEX14Q8IWB6 1497 aa18.43■□□□□ 0.54
ABCC4-206ENST00000536256 CNTLNQ9NXG0 1405 aa18.43■□□□□ 0.54
ABCC4-206ENST00000536256 GPATCH8Q9UKJ3 1502 aaKnown RBP18.43■□□□□ 0.54
ABCC4-206ENST00000536256 CCDC184Q52MB2 194 aa18.42■□□□□ 0.54
ABCC4-206ENST00000536256 CCDC7Q96M83 1385 aa18.42■□□□□ 0.54
ABCC4-206ENST00000536256 NCOA1Q15788 1441 aa18.42■□□□□ 0.54
ABCC4-206ENST00000536256 KIF14Q15058 1648 aa18.41■□□□□ 0.54
ABCC4-206ENST00000536256 CARMIL2Q6F5E8 1435 aa18.4■□□□□ 0.54
ABCC4-206ENST00000536256 MYT1Q01538 1121 aa18.4■□□□□ 0.54
ABCC4-206ENST00000536256 PZPP20742 1482 aa18.39■□□□□ 0.53
ABCC4-206ENST00000536256 PRKRIP1Q9H875 184 aaPredicted RBP18.38■□□□□ 0.53
ABCC4-206ENST00000536256 ITSN2Q9NZM3 1697 aa18.37■□□□□ 0.53
ABCC4-206ENST00000536256 PLEKHD1A6NEE1 506 aa18.36■□□□□ 0.53
ABCC4-206ENST00000536256 ZNF326Q5BKZ1 582 aaKnown RBP18.36■□□□□ 0.53
ABCC4-206ENST00000536256 KIF7Q2M1P5 1343 aa18.36■□□□□ 0.53
ABCC4-206ENST00000536256 PKD2Q13563 968 aa18.36■□□□□ 0.53
ABCC4-206ENST00000536256 SENP3-EIF4A1A0A087X0R7 540 aa18.36■□□□□ 0.53
ABCC4-206ENST00000536256 FAM9BQ8IZU0 186 aa18.35■□□□□ 0.53
ABCC4-206ENST00000536256 SPATA31E1Q6ZUB1 1445 aa18.35■□□□□ 0.53
ABCC4-206ENST00000536256 ANKRD30AQ9BXX3 1397 aa18.34■□□□□ 0.53
ABCC4-206ENST00000536256 NUP160Q12769 1436 aa18.34■□□□□ 0.53
ABCC4-206ENST00000536256 IRX6P78412 446 aaPredicted RBP18.33■□□□□ 0.53
ABCC4-206ENST00000536256 MRS2Q9HD23 443 aa18.33■□□□□ 0.53
ABCC4-206ENST00000536256 ADGBQ8N7X0 1667 aa18.33■□□□□ 0.52
ABCC4-206ENST00000536256 ADCY10Q96PN6 1610 aa18.32■□□□□ 0.52
ABCC4-206ENST00000536256 KIAA1107Q9UPP5 1409 aa18.32■□□□□ 0.52
ABCC4-206ENST00000536256 ADGRL2O95490 1459 aa18.31■□□□□ 0.52
ABCC4-206ENST00000536256 ANKRD50Q9ULJ7 1429 aa18.31■□□□□ 0.52
ABCC4-206ENST00000536256 POLR3GLQ9BT43 218 aa18.3■□□□□ 0.52
ABCC4-206ENST00000536256 CROCC2H7BZ55 1655 aa18.29■□□□□ 0.52
ABCC4-206ENST00000536256 ATP10BO94823 1461 aa18.29■□□□□ 0.52
ABCC4-206ENST00000536256 NUP155O75694 1391 aa18.28■□□□□ 0.52
ABCC4-206ENST00000536256 TSPY4P0CV99 314 aa18.27■□□□□ 0.52
ABCC4-206ENST00000536256 TSPY10P0CW01 314 aa18.27■□□□□ 0.52
ABCC4-206ENST00000536256 CDC42BPAQ5VT25 1732 aa18.26■□□□□ 0.51
ABCC4-206ENST00000536256 HNRNPMP52272 730 aaKnown RBP eCLIP18.26■□□□□ 0.511e-6■■■■□ 22.3
ABCC4-206ENST00000536256 USP47Q96K76 1375 aa18.25■□□□□ 0.51
ABCC4-206ENST00000536256 ABCA8O94911 1581 aa18.25■□□□□ 0.51
ABCC4-206ENST00000536256 C9orf84Q5VXU9 1444 aa18.25■□□□□ 0.51
ABCC4-206ENST00000536256 ABCC10Q5T3U5 1492 aa18.24■□□□□ 0.51
ABCC4-206ENST00000536256 MBD5Q9P267 1494 aa18.24■□□□□ 0.51
ABCC4-206ENST00000536256 RBM19Q9Y4C8 960 aaKnown RBP18.23■□□□□ 0.51
ABCC4-206ENST00000536256 POLR1AO95602 1720 aaPredicted RBP18.23■□□□□ 0.51
ABCC4-206ENST00000536256 KDM2AQ9Y2K7 1162 aa18.21■□□□□ 0.51
ABCC4-206ENST00000536256 BCORL1Q5H9F3 1711 aa18.19■□□□□ 0.5
ABCC4-206ENST00000536256 ZBED9Q6R2W3 1325 aa18.19■□□□□ 0.5
ABCC4-206ENST00000536256 KIF15Q9NS87 1388 aa18.18■□□□□ 0.5
ABCC4-206ENST00000536256 SHANK2Q9UPX8 1470 aa18.18■□□□□ 0.5
ABCC4-206ENST00000536256 PTPRGP23470 1445 aa18.18■□□□□ 0.5
ABCC4-206ENST00000536256 CARD11Q9BXL7 1154 aa18.18■□□□□ 0.5
ABCC4-206ENST00000536256 DHX29Q7Z478 1369 aaKnown RBP18.17■□□□□ 0.5
ABCC4-206ENST00000536256 DCAF11Q8TEB1 546 aa18.16■□□□□ 0.5
ABCC4-206ENST00000536256 KDM5CP41229 1560 aa18.14■□□□□ 0.5
ABCC4-206ENST00000536256 UHRF1BP1Q6BDS2 1440 aa18.13■□□□□ 0.49
ABCC4-206ENST00000536256 ST20-MTHFSA0A0A6YYL1 179 aa18.12■□□□□ 0.49
ABCC4-206ENST00000536256 ANP32EQ9BTT0 268 aa18.12■□□□□ 0.49
ABCC4-206ENST00000536256 RALGAPBQ86X10 1494 aa18.11■□□□□ 0.49
ABCC4-206ENST00000536256 ARID4BQ4LE39 1312 aaPredicted RBP18.11■□□□□ 0.49
ABCC4-206ENST00000536256 PPP4R2Q9NY27 417 aa18.1■□□□□ 0.49
ABCC4-206ENST00000536256 ERICH6BQ5W0A0 696 aa18.1■□□□□ 0.49
ABCC4-206ENST00000536256 KDM5DQ9BY66 1539 aa18.09■□□□□ 0.49
ABCC4-206ENST00000536256 ARHGEF5Q12774 1597 aa18.09■□□□□ 0.49
ABCC4-206ENST00000536256 CCDC141Q6ZP82 1450 aa18.08■□□□□ 0.49
ABCC4-206ENST00000536256 SAMD9LQ8IVG5 1584 aa18.08■□□□□ 0.48
ABCC4-206ENST00000536256 CDC42BPBQ9Y5S2 1711 aa18.08■□□□□ 0.48
ABCC4-206ENST00000536256 ARHGEF12Q9NZN5 1544 aa18.07■□□□□ 0.48
ABCC4-206ENST00000536256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.07■□□□□ 0.48
ABCC4-206ENST00000536256 RGL3Q3MIN7 710 aa18.06■□□□□ 0.48
ABCC4-206ENST00000536256 RSPH4AQ5TD94 716 aa18.06■□□□□ 0.48
ABCC4-206ENST00000536256 ROCK2O75116 1388 aaKnown RBP18.05■□□□□ 0.48
ABCC4-206ENST00000536256 B4GALNT3Q6L9W6 998 aa18.05■□□□□ 0.48
ABCC4-206ENST00000536256 TMC1Q8TDI8 760 aa18.05■□□□□ 0.48
ABCC4-206ENST00000536256 FAM135AQ9P2D6 1515 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms