RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 LOC105371045A0A1W2PR82 267 aa20.38■□□□□ 0.85
DDB1-207ENST00000535967 LRRIQ1Q96JM4 1722 aa20.38■□□□□ 0.85
DDB1-207ENST00000535967 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.37■□□□□ 0.85
DDB1-207ENST00000535967 HNRNPUL2Q1KMD3 747 aaKnown RBP20.37■□□□□ 0.85
DDB1-207ENST00000535967 MADDQ8WXG6 1647 aa20.37■□□□□ 0.85
DDB1-207ENST00000535967 FYCO1Q9BQS8 1478 aa20.34■□□□□ 0.85
DDB1-207ENST00000535967 RICTORQ6R327 1708 aa20.34■□□□□ 0.85
DDB1-207ENST00000535967 ARHGEF40Q8TER5 1519 aa20.32■□□□□ 0.84
DDB1-207ENST00000535967 CASKIN1Q8WXD9 1431 aa20.32■□□□□ 0.84
DDB1-207ENST00000535967 DCAF8L1A6NGE4 600 aa20.3■□□□□ 0.84
DDB1-207ENST00000535967 SIGLEC1Q9BZZ2 1709 aa20.3■□□□□ 0.84
DDB1-207ENST00000535967 TTC37Q6PGP7 1564 aa20.3■□□□□ 0.84
DDB1-207ENST00000535967 ARID4BQ4LE39 1312 aaPredicted RBP20.29■□□□□ 0.84
DDB1-207ENST00000535967 RIMS1Q86UR5 1692 aaKnown RBP20.29■□□□□ 0.84
DDB1-207ENST00000535967 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.29■□□□□ 0.84
DDB1-207ENST00000535967 CCDC18Q5T9S5 1454 aa20.29■□□□□ 0.84
DDB1-207ENST00000535967 LMTK3Q96Q04 1460 aa20.29■□□□□ 0.84
DDB1-207ENST00000535967 CDK13Q14004 1512 aaKnown RBP20.27■□□□□ 0.84
DDB1-207ENST00000535967 DENND4BO75064 1496 aaPredicted RBP20.27■□□□□ 0.84
DDB1-207ENST00000535967 AKNAQ7Z591 1439 aa20.26■□□□□ 0.83
DDB1-207ENST00000535967 FBXO41Q8TF61 875 aa20.26■□□□□ 0.83
DDB1-207ENST00000535967 FANCAO15360 1455 aa20.26■□□□□ 0.83
DDB1-207ENST00000535967 PLEKHD1A6NEE1 506 aa20.24■□□□□ 0.83
DDB1-207ENST00000535967 CFAP74Q9C0B2 1584 aa20.22■□□□□ 0.83
DDB1-207ENST00000535967 VPS8Q8N3P4 1428 aa20.22■□□□□ 0.83
DDB1-207ENST00000535967 YEATS2Q9ULM3 1422 aa20.22■□□□□ 0.83
DDB1-207ENST00000535967 ZMYM4Q5VZL5 1548 aa20.21■□□□□ 0.83
DDB1-207ENST00000535967 ZFYVE16Q7Z3T8 1539 aa20.19■□□□□ 0.82
DDB1-207ENST00000535967 HSPA2P54652 639 aa20.17■□□□□ 0.82
DDB1-207ENST00000535967 KIF14Q15058 1648 aa20.16■□□□□ 0.82
DDB1-207ENST00000535967 ATP1B4Q9UN42 357 aaPredicted RBP20.15■□□□□ 0.82
DDB1-207ENST00000535967 POGZQ7Z3K3 1410 aa20.13■□□□□ 0.81
DDB1-207ENST00000535967 FER1L4A9Z1Z3 1794 aa20.12■□□□□ 0.81
DDB1-207ENST00000535967 SCAPERQ9BY12 1400 aa20.12■□□□□ 0.81
DDB1-207ENST00000535967 TIAM1Q13009 1591 aa20.11■□□□□ 0.81
DDB1-207ENST00000535967 CDK11AQ9UQ88 783 aaPredicted RBP20.11■□□□□ 0.81
DDB1-207ENST00000535967 PLCH2O75038 1416 aa20.11■□□□□ 0.81
DDB1-207ENST00000535967 TROQ12816 1431 aaPredicted RBP20.11■□□□□ 0.81
DDB1-207ENST00000535967 MLECQ14165 292 aa20.1■□□□□ 0.81
DDB1-207ENST00000535967 MAGI2Q86UL8 1455 aa20.1■□□□□ 0.81
DDB1-207ENST00000535967 MYO5CQ9NQX4 1742 aa20.1■□□□□ 0.81
DDB1-207ENST00000535967 MAP3K1Q13233 1512 aa20.09■□□□□ 0.81
DDB1-207ENST00000535967 EHBP1L1Q8N3D4 1523 aa20.09■□□□□ 0.81
DDB1-207ENST00000535967 ARHGEF12Q9NZN5 1544 aa20.05■□□□□ 0.8
DDB1-207ENST00000535967 ATP10AO60312 1499 aa20.03■□□□□ 0.8
DDB1-207ENST00000535967 SUPT6HQ7KZ85 1726 aaKnown RBP20.02■□□□□ 0.8
DDB1-207ENST00000535967 PREX2Q70Z35 1606 aa20.01■□□□□ 0.79
DDB1-207ENST00000535967 CDC42BPAQ5VT25 1732 aa20.01■□□□□ 0.79
DDB1-207ENST00000535967 C9orf84Q5VXU9 1444 aa20.01■□□□□ 0.79
DDB1-207ENST00000535967 ITSN2Q9NZM3 1697 aa19.99■□□□□ 0.79
DDB1-207ENST00000535967 CEBPAP49715 358 aaPredicted RBP19.99■□□□□ 0.79
DDB1-207ENST00000535967 EFCAB2Q5VUJ9 269 aa19.99■□□□□ 0.79
DDB1-207ENST00000535967 MTUS2Q5JR59 1369 aa19.99■□□□□ 0.79
DDB1-207ENST00000535967 PREX1Q8TCU6 1659 aa19.98■□□□□ 0.79
DDB1-207ENST00000535967 CDC42BPBQ9Y5S2 1711 aa19.98■□□□□ 0.79
DDB1-207ENST00000535967 KDM5CP41229 1560 aa19.98■□□□□ 0.79
DDB1-207ENST00000535967 ARHGAP5Q13017 1502 aa19.96■□□□□ 0.79
DDB1-207ENST00000535967 ZNF518AQ6AHZ1 1483 aa19.95■□□□□ 0.78
DDB1-207ENST00000535967 LRRC9Q6ZRR7 1453 aa19.95■□□□□ 0.78
DDB1-207ENST00000535967 AFAP1Q8N556 730 aa19.95■□□□□ 0.78
DDB1-207ENST00000535967 CERKQ8TCT0 537 aa19.95■□□□□ 0.78
DDB1-207ENST00000535967 DIP2CQ9Y2E4 1556 aa19.95■□□□□ 0.78
DDB1-207ENST00000535967 STRCQ7RTU9 1775 aa19.94■□□□□ 0.78
DDB1-207ENST00000535967 ABCA6Q8N139 1617 aa19.92■□□□□ 0.78
DDB1-207ENST00000535967 SLC4A2P04920 1241 aa19.91■□□□□ 0.78
DDB1-207ENST00000535967 SETD1BQ9UPS6 1966 aaKnown RBP19.88■□□□□ 0.77
DDB1-207ENST00000535967 APLP2Q06481 763 aa19.88■□□□□ 0.77
DDB1-207ENST00000535967 NCOA2Q15596 1464 aa19.88■□□□□ 0.77
DDB1-207ENST00000535967 TRAPPC8Q9Y2L5 1435 aa19.87■□□□□ 0.77
DDB1-207ENST00000535967 ABCC1P33527 1531 aa19.87■□□□□ 0.77
DDB1-207ENST00000535967 REREQ9P2R6 1566 aa19.87■□□□□ 0.77
DDB1-207ENST00000535967 C3P01024 1663 aa19.87■□□□□ 0.77
DDB1-207ENST00000535967 MLH3Q9UHC1 1453 aa19.85■□□□□ 0.77
DDB1-207ENST00000535967 ZBTB22O15209 634 aa19.85■□□□□ 0.77
DDB1-207ENST00000535967 GPATCH8Q9UKJ3 1502 aaKnown RBP19.84■□□□□ 0.77
DDB1-207ENST00000535967 UHRF1BP1Q6BDS2 1440 aa19.84■□□□□ 0.77
DDB1-207ENST00000535967 MYT1LQ9UL68 1186 aa19.84■□□□□ 0.77
DDB1-207ENST00000535967 CCNB3Q8WWL7 1395 aa19.83■□□□□ 0.76
DDB1-207ENST00000535967 KIDINS220Q9ULH0 1771 aa19.83■□□□□ 0.76
DDB1-207ENST00000535967 SAMD9LQ8IVG5 1584 aa19.82■□□□□ 0.76
DDB1-207ENST00000535967 AGLP35573 1532 aa19.81■□□□□ 0.76
DDB1-207ENST00000535967 KANK4Q5T7N3 995 aaPredicted RBP19.78■□□□□ 0.76
DDB1-207ENST00000535967 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.78■□□□□ 0.762e-7■■□□□ 13.1
DDB1-207ENST00000535967 PLEKHH2Q8IVE3 1493 aa19.76■□□□□ 0.75
DDB1-207ENST00000535967 MYOM3Q5VTT5 1437 aa19.74■□□□□ 0.75
DDB1-207ENST00000535967 FOXD4L1Q9NU39 408 aa19.73■□□□□ 0.75
DDB1-207ENST00000535967 SYCP2Q9BX26 1530 aa19.73■□□□□ 0.75
DDB1-207ENST00000535967 PTPRTO14522 1441 aa19.73■□□□□ 0.75
DDB1-207ENST00000535967 LTBP4Q8N2S1 1624 aa19.71■□□□□ 0.75
DDB1-207ENST00000535967 MIA2Q96PC5 1412 aa19.71■□□□□ 0.75
DDB1-207ENST00000535967 CFDP1Q9UEE9 299 aaPredicted RBP19.7■□□□□ 0.74
DDB1-207ENST00000535967 CAMSAP2Q08AD1 1489 aa19.7■□□□□ 0.74
DDB1-207ENST00000535967 NCOA1Q15788 1441 aa19.69■□□□□ 0.74
DDB1-207ENST00000535967 KIAA1107Q9UPP5 1409 aa19.69■□□□□ 0.74
DDB1-207ENST00000535967 ILDR2Q71H61 639 aa19.69■□□□□ 0.74
DDB1-207ENST00000535967 ZNF777Q9ULD5 760 aaPredicted RBP19.69■□□□□ 0.74
DDB1-207ENST00000535967 PTPN23Q9H3S7 1636 aa19.68■□□□□ 0.74
DDB1-207ENST00000535967 ESF1Q9H501 851 aaKnown RBP19.68■□□□□ 0.74
DDB1-207ENST00000535967 CNTLNQ9NXG0 1405 aa19.68■□□□□ 0.74
DDB1-207ENST00000535967 MROH2AA6NES4 1674 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms