RNA–Protein interactions for RNA: ENST00000535561.5

SOD2-209, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-209ENST00000535561 PREX2Q70Z35 1606 aa22.6■■□□□ 1.21
SOD2-209ENST00000535561 ARHGAP5Q13017 1502 aa22.58■■□□□ 1.21
SOD2-209ENST00000535561 AKNAQ7Z591 1439 aa22.57■■□□□ 1.2
SOD2-209ENST00000535561 CFDP1Q9UEE9 299 aaPredicted RBP22.56■■□□□ 1.2
SOD2-209ENST00000535561 CDC42BPAQ5VT25 1732 aa22.54■■□□□ 1.2
SOD2-209ENST00000535561 KDM6BO15054 1643 aa22.53■■□□□ 1.2
SOD2-209ENST00000535561 ITSN2Q9NZM3 1697 aa22.53■■□□□ 1.2
SOD2-209ENST00000535561 PLEKHH2Q8IVE3 1493 aa22.52■■□□□ 1.2
SOD2-209ENST00000535561 CDC42BPBQ9Y5S2 1711 aa22.51■■□□□ 1.19
SOD2-209ENST00000535561 MYOM3Q5VTT5 1437 aa22.51■■□□□ 1.19
SOD2-209ENST00000535561 MIA2Q96PC5 1412 aa22.51■■□□□ 1.19
SOD2-209ENST00000535561 ADGRL1O94910 1474 aa22.51■■□□□ 1.19
SOD2-209ENST00000535561 KIAA1107Q9UPP5 1409 aa22.49■■□□□ 1.19
SOD2-209ENST00000535561 DENND4BO75064 1496 aaPredicted RBP22.49■■□□□ 1.19
SOD2-209ENST00000535561 COL17A1Q9UMD9 1497 aaPredicted RBP22.49■■□□□ 1.19
SOD2-209ENST00000535561 SCAPERQ9BY12 1400 aa22.48■■□□□ 1.19
SOD2-209ENST00000535561 ABCC1P33527 1531 aa22.46■■□□□ 1.19
SOD2-209ENST00000535561 POGZQ7Z3K3 1410 aa22.45■■□□□ 1.18
SOD2-209ENST00000535561 ZNF777Q9ULD5 760 aaPredicted RBP22.43■■□□□ 1.18
SOD2-209ENST00000535561 SAMD9LQ8IVG5 1584 aa22.42■■□□□ 1.18
SOD2-209ENST00000535561 ZNF518AQ6AHZ1 1483 aa22.42■■□□□ 1.18
SOD2-209ENST00000535561 FGD6Q6ZV73 1430 aa22.4■■□□□ 1.18
SOD2-209ENST00000535561 RAPGEF3O95398 923 aa22.4■■□□□ 1.18
SOD2-209ENST00000535561 RSPH4AQ5TD94 716 aa22.4■■□□□ 1.18
SOD2-209ENST00000535561 CAMSAP2Q08AD1 1489 aa22.39■■□□□ 1.17
SOD2-209ENST00000535561 MAGI2Q86UL8 1455 aa22.39■■□□□ 1.17
SOD2-209ENST00000535561 ZMYM4Q5VZL5 1548 aa22.38■■□□□ 1.17
SOD2-209ENST00000535561 FRMPD1Q5SYB0 1578 aa22.38■■□□□ 1.17
SOD2-209ENST00000535561 ARHGEF12Q9NZN5 1544 aa22.37■■□□□ 1.17
SOD2-209ENST00000535561 ZNF644Q9H582 1327 aaPredicted RBP22.37■■□□□ 1.17
SOD2-209ENST00000535561 RICTORQ6R327 1708 aa22.37■■□□□ 1.17
SOD2-209ENST00000535561 SYCP2Q9BX26 1530 aa22.36■■□□□ 1.17
SOD2-209ENST00000535561 MBD5Q9P267 1494 aa22.36■■□□□ 1.17
SOD2-209ENST00000535561 TCOF1Q13428 1488 aaKnown RBP22.35■■□□□ 1.17
SOD2-209ENST00000535561 KDM5CP41229 1560 aa22.35■■□□□ 1.17
SOD2-209ENST00000535561 TRAPPC8Q9Y2L5 1435 aa22.34■■□□□ 1.17
SOD2-209ENST00000535561 HNRNPMP52272 730 aaKnown RBP eCLIP22.34■■□□□ 1.172e-6■■■■■ 35.7
SOD2-209ENST00000535561 AFAP1Q8N556 730 aa22.33■■□□□ 1.17
SOD2-209ENST00000535561 MLH3Q9UHC1 1453 aa22.32■■□□□ 1.16
SOD2-209ENST00000535561 ARHGEF5Q12774 1597 aa22.32■■□□□ 1.16
SOD2-209ENST00000535561 CCDC141Q6ZP82 1450 aa22.31■■□□□ 1.16
SOD2-209ENST00000535561 PTPN23Q9H3S7 1636 aa22.31■■□□□ 1.16
SOD2-209ENST00000535561 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.3■■□□□ 1.167e-6■■■□□ 16.5
SOD2-209ENST00000535561 PPARGC1BQ86YN6 1023 aaKnown RBP22.3■■□□□ 1.16
SOD2-209ENST00000535561 SPAG9O60271 1321 aaKnown RBP22.28■■□□□ 1.16
SOD2-209ENST00000535561 RTEL1-TNFRSF6BF6WH68 1400 aa22.27■■□□□ 1.16
SOD2-209ENST00000535561 ZFYVE16Q7Z3T8 1539 aa22.26■■□□□ 1.15
SOD2-209ENST00000535561 HECW2Q9P2P5 1572 aa22.26■■□□□ 1.15
SOD2-209ENST00000535561 ARHGEF40Q8TER5 1519 aa22.26■■□□□ 1.15
SOD2-209ENST00000535561 TSPY4P0CV99 314 aa22.25■■□□□ 1.15
SOD2-209ENST00000535561 TSPY10P0CW01 314 aa22.25■■□□□ 1.15
SOD2-209ENST00000535561 RRBP1Q9P2E9 1410 aaKnown RBP22.24■■□□□ 1.15
SOD2-209ENST00000535561 SHANK2Q9UPX8 1470 aa22.22■■□□□ 1.15
SOD2-209ENST00000535561 FAM50AQ14320 339 aaKnown RBP22.21■■□□□ 1.15
SOD2-209ENST00000535561 YEATS2Q9ULM3 1422 aa22.21■■□□□ 1.15
SOD2-209ENST00000535561 ATP10AO60312 1499 aa22.21■■□□□ 1.15
SOD2-209ENST00000535561 ATP7AQ04656 1500 aa22.21■■□□□ 1.15
SOD2-209ENST00000535561 INO80Q9ULG1 1556 aaPredicted RBP22.21■■□□□ 1.15
SOD2-209ENST00000535561 ABCC5O15440 1437 aa22.2■■□□□ 1.14
SOD2-209ENST00000535561 MYT1LQ9UL68 1186 aa22.19■■□□□ 1.14
SOD2-209ENST00000535561 DAPK1P53355 1430 aa22.19■■□□□ 1.14
SOD2-209ENST00000535561 MAST1Q9Y2H9 1570 aa22.19■■□□□ 1.14
SOD2-209ENST00000535561 DNMT1P26358 1616 aaKnown RBP22.19■■□□□ 1.14
SOD2-209ENST00000535561 C9orf84Q5VXU9 1444 aa22.17■■□□□ 1.14
SOD2-209ENST00000535561 REREQ9P2R6 1566 aa22.16■■□□□ 1.14
SOD2-209ENST00000535561 KIDINS220Q9ULH0 1771 aa22.16■■□□□ 1.14
SOD2-209ENST00000535561 DIP2CQ9Y2E4 1556 aa22.16■■□□□ 1.14
SOD2-209ENST00000535561 ABCA6Q8N139 1617 aa22.13■■□□□ 1.13
SOD2-209ENST00000535561 CROCC2H7BZ55 1655 aa22.11■■□□□ 1.13
SOD2-209ENST00000535561 PLXNC1O60486 1568 aa22.1■■□□□ 1.13
SOD2-209ENST00000535561 AGLP35573 1532 aa22.1■■□□□ 1.13
SOD2-209ENST00000535561 ANKRD30AQ9BXX3 1397 aa22.1■■□□□ 1.13
SOD2-209ENST00000535561 ADGRL2O95490 1459 aa22.09■■□□□ 1.13
SOD2-209ENST00000535561 A2MP01023 1474 aa22.09■■□□□ 1.13
SOD2-209ENST00000535561 ROCK1Q13464 1354 aa22.08■■□□□ 1.12
SOD2-209ENST00000535561 DHX29Q7Z478 1369 aaKnown RBP22.08■■□□□ 1.12
SOD2-209ENST00000535561 ADGBQ8N7X0 1667 aa22.07■■□□□ 1.12
SOD2-209ENST00000535561 NCOA1Q15788 1441 aa22.06■■□□□ 1.12
SOD2-209ENST00000535561 ARID4BQ4LE39 1312 aaPredicted RBP22.05■■□□□ 1.12
SOD2-209ENST00000535561 KIF15Q9NS87 1388 aa22.03■■□□□ 1.12
SOD2-209ENST00000535561 DUOX2Q9NRD8 1548 aa22.03■■□□□ 1.12
SOD2-209ENST00000535561 PTPRKQ15262 1439 aa22.03■■□□□ 1.12
SOD2-209ENST00000535561 CHIC2Q9UKJ5 165 aa22.01■■□□□ 1.11
SOD2-209ENST00000535561 ERBINQ96RT1 1412 aa22■■□□□ 1.11
SOD2-209ENST00000535561 RRP7BPQ9NSQ0 103 aa21.98■■□□□ 1.11
SOD2-209ENST00000535561 PPP6R1Q9UPN7 881 aa21.98■■□□□ 1.11
SOD2-209ENST00000535561 ITGAEP38570 1179 aa21.96■■□□□ 1.11
SOD2-209ENST00000535561 EIF2AK4Q9P2K8 1649 aaKnown RBP21.95■■□□□ 1.1
SOD2-209ENST00000535561 BCORL1Q5H9F3 1711 aa21.95■■□□□ 1.1
SOD2-209ENST00000535561 SIGLEC1Q9BZZ2 1709 aa21.95■■□□□ 1.1
SOD2-209ENST00000535561 FAM135AQ9P2D6 1515 aa21.92■■□□□ 1.1
SOD2-209ENST00000535561 ANKRD50Q9ULJ7 1429 aa21.92■■□□□ 1.1
SOD2-209ENST00000535561 KIF3BO15066 747 aa21.92■■□□□ 1.1
SOD2-209ENST00000535561 ADAMTSL3P82987 1691 aa21.91■■□□□ 1.1
SOD2-209ENST00000535561 HFM1A2PYH4 1435 aa21.89■■□□□ 1.1
SOD2-209ENST00000535561 KDM4FA0A1W2PPD8 638 aa21.89■■□□□ 1.09
SOD2-209ENST00000535561 CNTLNQ9NXG0 1405 aa21.89■■□□□ 1.09
SOD2-209ENST00000535561 MLECQ14165 292 aa21.88■■□□□ 1.09
SOD2-209ENST00000535561 RNF17Q9BXT8 1623 aaKnown RBP21.88■■□□□ 1.09
SOD2-209ENST00000535561 ESF1Q9H501 851 aaKnown RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms