RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 ARHGAP5Q13017 1502 aa32.25■■■□□ 2.75
CHFR-209ENST00000535181 GPATCH8Q9UKJ3 1502 aaKnown RBP32.25■■■□□ 2.75
CHFR-209ENST00000535181 AKNAQ7Z591 1439 aa32.25■■■□□ 2.75
CHFR-209ENST00000535181 NCOA2Q15596 1464 aa32.24■■■□□ 2.75
CHFR-209ENST00000535181 EFCAB2Q5VUJ9 269 aa32.23■■■□□ 2.75
CHFR-209ENST00000535181 KANK4Q5T7N3 995 aaPredicted RBP32.22■■■□□ 2.75
CHFR-209ENST00000535181 CCNB3Q8WWL7 1395 aa32.21■■■□□ 2.75
CHFR-209ENST00000535181 ITSN2Q9NZM3 1697 aa32.2■■■□□ 2.74
CHFR-209ENST00000535181 ADGRL1O94910 1474 aa32.16■■■□□ 2.74
CHFR-209ENST00000535181 DENND4BO75064 1496 aaPredicted RBP32.13■■■□□ 2.73
CHFR-209ENST00000535181 FRMPD1Q5SYB0 1578 aa32.11■■■□□ 2.73
CHFR-209ENST00000535181 RICTORQ6R327 1708 aa32.1■■■□□ 2.73
CHFR-209ENST00000535181 ABCC1P33527 1531 aa32.1■■■□□ 2.73
CHFR-209ENST00000535181 SCAPERQ9BY12 1400 aa32.09■■■□□ 2.73
CHFR-209ENST00000535181 CFDP1Q9UEE9 299 aaPredicted RBP32.09■■■□□ 2.73
CHFR-209ENST00000535181 SAMD9LQ8IVG5 1584 aa32.07■■■□□ 2.72
CHFR-209ENST00000535181 POGZQ7Z3K3 1410 aa32.06■■■□□ 2.72
CHFR-209ENST00000535181 PLEKHH2Q8IVE3 1493 aa32.04■■■□□ 2.72
CHFR-209ENST00000535181 RAPGEF3O95398 923 aa32.03■■■□□ 2.72
CHFR-209ENST00000535181 ZMYM4Q5VZL5 1548 aa32.03■■■□□ 2.72
CHFR-209ENST00000535181 KIAA1107Q9UPP5 1409 aa32.02■■■□□ 2.72
CHFR-209ENST00000535181 MYOM3Q5VTT5 1437 aa32.01■■■□□ 2.72
CHFR-209ENST00000535181 ZNF518AQ6AHZ1 1483 aa32.01■■■□□ 2.71
CHFR-209ENST00000535181 ARHGEF12Q9NZN5 1544 aa32■■■□□ 2.71
CHFR-209ENST00000535181 MIA2Q96PC5 1412 aa31.99■■■□□ 2.71
CHFR-209ENST00000535181 KDM5CP41229 1560 aa31.98■■■□□ 2.71
CHFR-209ENST00000535181 ZNF777Q9ULD5 760 aaPredicted RBP31.97■■■□□ 2.71
CHFR-209ENST00000535181 SYCP2Q9BX26 1530 aa31.96■■■□□ 2.71
CHFR-209ENST00000535181 MAGI2Q86UL8 1455 aa31.95■■■□□ 2.7
CHFR-209ENST00000535181 CAMSAP2Q08AD1 1489 aa31.92■■■□□ 2.7
CHFR-209ENST00000535181 TRAPPC8Q9Y2L5 1435 aa31.92■■■□□ 2.7
CHFR-209ENST00000535181 ZNF644Q9H582 1327 aaPredicted RBP31.89■■■□□ 2.7
CHFR-209ENST00000535181 MBD5Q9P267 1494 aa31.89■■■□□ 2.7
CHFR-209ENST00000535181 ARHGEF40Q8TER5 1519 aa31.89■■■□□ 2.7
CHFR-209ENST00000535181 AFAP1Q8N556 730 aa31.87■■■□□ 2.69
CHFR-209ENST00000535181 MLH3Q9UHC1 1453 aa31.86■■■□□ 2.69
CHFR-209ENST00000535181 HECW2Q9P2P5 1572 aa31.85■■■□□ 2.69
CHFR-209ENST00000535181 ZFYVE16Q7Z3T8 1539 aa31.85■■■□□ 2.69
CHFR-209ENST00000535181 FGD6Q6ZV73 1430 aa31.85■■■□□ 2.69
CHFR-209ENST00000535181 HNRNPMP52272 730 aaKnown RBP eCLIP31.85■■■□□ 2.69
CHFR-209ENST00000535181 ARHGEF5Q12774 1597 aa31.83■■■□□ 2.69
CHFR-209ENST00000535181 PTPN23Q9H3S7 1636 aa31.82■■■□□ 2.68
CHFR-209ENST00000535181 TCOF1Q13428 1488 aaKnown RBP31.81■■■□□ 2.68
CHFR-209ENST00000535181 RSPH4AQ5TD94 716 aa31.81■■■□□ 2.68
CHFR-209ENST00000535181 CCDC141Q6ZP82 1450 aa31.79■■■□□ 2.68
CHFR-209ENST00000535181 YEATS2Q9ULM3 1422 aa31.79■■■□□ 2.68
CHFR-209ENST00000535181 INO80Q9ULG1 1556 aaPredicted RBP31.76■■■□□ 2.67
CHFR-209ENST00000535181 KIDINS220Q9ULH0 1771 aa31.76■■■□□ 2.67
CHFR-209ENST00000535181 SPAG9O60271 1321 aaKnown RBP31.74■■■□□ 2.67
CHFR-209ENST00000535181 DIP2CQ9Y2E4 1556 aa31.73■■■□□ 2.67
CHFR-209ENST00000535181 ATP7AQ04656 1500 aa31.72■■■□□ 2.67
CHFR-209ENST00000535181 ATP10AO60312 1499 aa31.72■■■□□ 2.67
CHFR-209ENST00000535181 ABCA6Q8N139 1617 aa31.71■■■□□ 2.67
CHFR-209ENST00000535181 RTEL1-TNFRSF6BF6WH68 1400 aa31.71■■■□□ 2.67
CHFR-209ENST00000535181 REREQ9P2R6 1566 aa31.7■■■□□ 2.67
CHFR-209ENST00000535181 PPARGC1BQ86YN6 1023 aaKnown RBP31.7■■■□□ 2.67
CHFR-209ENST00000535181 C9orf84Q5VXU9 1444 aa31.68■■■□□ 2.66
CHFR-209ENST00000535181 MAST1Q9Y2H9 1570 aa31.67■■■□□ 2.66
CHFR-209ENST00000535181 DNMT1P26358 1616 aaKnown RBP31.65■■■□□ 2.66
CHFR-209ENST00000535181 MYT1LQ9UL68 1186 aa31.64■■■□□ 2.66
CHFR-209ENST00000535181 SHANK2Q9UPX8 1470 aa31.63■■■□□ 2.65
CHFR-209ENST00000535181 CROCC2H7BZ55 1655 aa31.63■■■□□ 2.65
CHFR-209ENST00000535181 TSPY4P0CV99 314 aa31.61■■■□□ 2.65
CHFR-209ENST00000535181 TSPY10P0CW01 314 aa31.61■■■□□ 2.65
CHFR-209ENST00000535181 ABCC5O15440 1437 aa31.6■■■□□ 2.65
CHFR-209ENST00000535181 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.6■■■□□ 2.65
CHFR-209ENST00000535181 SIGLEC1Q9BZZ2 1709 aa31.6■■■□□ 2.65
CHFR-209ENST00000535181 DAPK1P53355 1430 aa31.59■■■□□ 2.65
CHFR-209ENST00000535181 ADGBQ8N7X0 1667 aa31.59■■■□□ 2.65
CHFR-209ENST00000535181 RRBP1Q9P2E9 1410 aaKnown RBP31.58■■■□□ 2.65
CHFR-209ENST00000535181 AGLP35573 1532 aa31.57■■■□□ 2.64
CHFR-209ENST00000535181 PLXNC1O60486 1568 aa31.56■■■□□ 2.64
CHFR-209ENST00000535181 FAM50AQ14320 339 aaKnown RBP31.54■■■□□ 2.64
CHFR-209ENST00000535181 A2MP01023 1474 aa31.53■■■□□ 2.64
CHFR-209ENST00000535181 BCORL1Q5H9F3 1711 aa31.53■■■□□ 2.64
CHFR-209ENST00000535181 ARID4BQ4LE39 1312 aaPredicted RBP31.5■■■□□ 2.63
CHFR-209ENST00000535181 ADAMTSL3P82987 1691 aa31.48■■■□□ 2.63
CHFR-209ENST00000535181 DHX29Q7Z478 1369 aaKnown RBP31.46■■■□□ 2.63
CHFR-209ENST00000535181 KDM4FA0A1W2PPD8 638 aa31.46■■■□□ 2.63
CHFR-209ENST00000535181 ADGRL2O95490 1459 aa31.45■■■□□ 2.62
CHFR-209ENST00000535181 DUOX2Q9NRD8 1548 aa31.39■■■□□ 2.62
CHFR-209ENST00000535181 ANKRD30AQ9BXX3 1397 aa31.39■■■□□ 2.62
CHFR-209ENST00000535181 NCOA1Q15788 1441 aa31.38■■■□□ 2.61
CHFR-209ENST00000535181 KIF15Q9NS87 1388 aa31.37■■■□□ 2.61
CHFR-209ENST00000535181 PTPRKQ15262 1439 aa31.37■■■□□ 2.61
CHFR-209ENST00000535181 MADDQ8WXG6 1647 aa31.36■■■□□ 2.61
CHFR-209ENST00000535181 EIF2AK4Q9P2K8 1649 aaKnown RBP31.35■■■□□ 2.61
CHFR-209ENST00000535181 ROCK1Q13464 1354 aa31.33■■■□□ 2.61
CHFR-209ENST00000535181 ERBINQ96RT1 1412 aa31.32■■■□□ 2.61
CHFR-209ENST00000535181 CHIC2Q9UKJ5 165 aa31.32■■■□□ 2.6
CHFR-209ENST00000535181 FER1L4A9Z1Z3 1794 aa31.32■■■□□ 2.6
CHFR-209ENST00000535181 MLECQ14165 292 aa31.3■■■□□ 2.6
CHFR-209ENST00000535181 RRP7BPQ9NSQ0 103 aa31.29■■■□□ 2.6
CHFR-209ENST00000535181 RNF17Q9BXT8 1623 aaKnown RBP31.27■■■□□ 2.6
CHFR-209ENST00000535181 RIMS1Q86UR5 1692 aaKnown RBP31.26■■■□□ 2.6
CHFR-209ENST00000535181 FAM135AQ9P2D6 1515 aa31.25■■■□□ 2.59
CHFR-209ENST00000535181 PPP6R1Q9UPN7 881 aa31.25■■■□□ 2.59
CHFR-209ENST00000535181 KIF3BO15066 747 aa31.24■■■□□ 2.59
CHFR-209ENST00000535181 PTPRMP28827 1452 aa31.24■■■□□ 2.59
CHFR-209ENST00000535181 CNTLNQ9NXG0 1405 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms