RNA–Protein interactions for RNA: ENST00000534796.5

PTP4A2-216, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-216ENST00000534796 CDK13Q14004 1512 aaKnown RBP17.51■□□□□ 0.39
PTP4A2-216ENST00000534796 HECW1Q76N89 1606 aa17.5■□□□□ 0.39
PTP4A2-216ENST00000534796 FRMPD1Q5SYB0 1578 aa17.49■□□□□ 0.39
PTP4A2-216ENST00000534796 HECW2Q9P2P5 1572 aa17.49■□□□□ 0.39
PTP4A2-216ENST00000534796 ARID4BQ4LE39 1312 aaPredicted RBP17.48■□□□□ 0.39
PTP4A2-216ENST00000534796 TTC37Q6PGP7 1564 aa17.48■□□□□ 0.39
PTP4A2-216ENST00000534796 PLCH2O75038 1416 aa17.47■□□□□ 0.39
PTP4A2-216ENST00000534796 ARHGEF40Q8TER5 1519 aa17.45■□□□□ 0.38
PTP4A2-216ENST00000534796 MAGI2Q86UL8 1455 aa17.44■□□□□ 0.38
PTP4A2-216ENST00000534796 CLIP1P30622 1438 aa17.44■□□□□ 0.38
PTP4A2-216ENST00000534796 PTPRMP28827 1452 aa17.44■□□□□ 0.38
PTP4A2-216ENST00000534796 ZMYM4Q5VZL5 1548 aa17.43■□□□□ 0.38
PTP4A2-216ENST00000534796 ADAMTSL3P82987 1691 aa17.43■□□□□ 0.38
PTP4A2-216ENST00000534796 EFCAB2Q5VUJ9 269 aa17.43■□□□□ 0.38
PTP4A2-216ENST00000534796 RICTORQ6R327 1708 aa17.43■□□□□ 0.38
PTP4A2-216ENST00000534796 TROQ12816 1431 aaPredicted RBP17.42■□□□□ 0.38
PTP4A2-216ENST00000534796 POGZQ7Z3K3 1410 aa17.42■□□□□ 0.38
PTP4A2-216ENST00000534796 SCAPERQ9BY12 1400 aa17.41■□□□□ 0.38
PTP4A2-216ENST00000534796 BCORL1Q5H9F3 1711 aa17.4■□□□□ 0.38
PTP4A2-216ENST00000534796 ZFYVE16Q7Z3T8 1539 aa17.4■□□□□ 0.38
PTP4A2-216ENST00000534796 KIF14Q15058 1648 aa17.39■□□□□ 0.38
PTP4A2-216ENST00000534796 CCDC18Q5T9S5 1454 aa17.37■□□□□ 0.37
PTP4A2-216ENST00000534796 CASKIN1Q8WXD9 1431 aa17.37■□□□□ 0.37
PTP4A2-216ENST00000534796 MYO5CQ9NQX4 1742 aa17.36■□□□□ 0.37
PTP4A2-216ENST00000534796 YEATS2Q9ULM3 1422 aa17.36■□□□□ 0.37
PTP4A2-216ENST00000534796 MADDQ8WXG6 1647 aa17.35■□□□□ 0.37
PTP4A2-216ENST00000534796 ARHGAP5Q13017 1502 aa17.33■□□□□ 0.37
PTP4A2-216ENST00000534796 ZNF518AQ6AHZ1 1483 aa17.32■□□□□ 0.36
PTP4A2-216ENST00000534796 ATP10AO60312 1499 aa17.31■□□□□ 0.36
PTP4A2-216ENST00000534796 PCF11O94913 1555 aaKnown RBP17.31■□□□□ 0.36
PTP4A2-216ENST00000534796 FYCO1Q9BQS8 1478 aa17.31■□□□□ 0.36
PTP4A2-216ENST00000534796 C9orf84Q5VXU9 1444 aa17.3■□□□□ 0.36
PTP4A2-216ENST00000534796 ILDR1Q86SU0 546 aaPredicted RBP17.3■□□□□ 0.36
PTP4A2-216ENST00000534796 RIMS1Q86UR5 1692 aaKnown RBP17.27■□□□□ 0.36
PTP4A2-216ENST00000534796 MLECQ14165 292 aa17.27■□□□□ 0.36
PTP4A2-216ENST00000534796 LRRIQ1Q96JM4 1722 aa17.27■□□□□ 0.35
PTP4A2-216ENST00000534796 AFAP1Q8N556 730 aa17.26■□□□□ 0.35
PTP4A2-216ENST00000534796 MYT1LQ9UL68 1186 aa17.26■□□□□ 0.35
PTP4A2-216ENST00000534796 KDM5CP41229 1560 aa17.26■□□□□ 0.35
PTP4A2-216ENST00000534796 LMTK3Q96Q04 1460 aa17.25■□□□□ 0.35
PTP4A2-216ENST00000534796 PREX2Q70Z35 1606 aa17.23■□□□□ 0.35
PTP4A2-216ENST00000534796 MLH3Q9UHC1 1453 aa17.23■□□□□ 0.35
PTP4A2-216ENST00000534796 SIGLEC1Q9BZZ2 1709 aa17.22■□□□□ 0.35
PTP4A2-216ENST00000534796 ARHGEF12Q9NZN5 1544 aa17.21■□□□□ 0.35
PTP4A2-216ENST00000534796 CDC42BPBQ9Y5S2 1711 aa17.21■□□□□ 0.35
PTP4A2-216ENST00000534796 ABCC1P33527 1531 aa17.21■□□□□ 0.34
PTP4A2-216ENST00000534796 REREQ9P2R6 1566 aa17.19■□□□□ 0.34
PTP4A2-216ENST00000534796 FER1L4A9Z1Z3 1794 aa17.19■□□□□ 0.34
PTP4A2-216ENST00000534796 TRAPPC8Q9Y2L5 1435 aa17.18■□□□□ 0.34
PTP4A2-216ENST00000534796 DIP2CQ9Y2E4 1556 aa17.17■□□□□ 0.34
PTP4A2-216ENST00000534796 RNF39Q9H2S5 420 aa17.16■□□□□ 0.34
PTP4A2-216ENST00000534796 ZNF777Q9ULD5 760 aaPredicted RBP17.15■□□□□ 0.34
PTP4A2-216ENST00000534796 AGLP35573 1532 aa17.15■□□□□ 0.34
PTP4A2-216ENST00000534796 GPATCH8Q9UKJ3 1502 aaKnown RBP17.15■□□□□ 0.34
PTP4A2-216ENST00000534796 MTUS2Q5JR59 1369 aa17.15■□□□□ 0.34
PTP4A2-216ENST00000534796 ITSN2Q9NZM3 1697 aa17.14■□□□□ 0.33
PTP4A2-216ENST00000534796 PLEKHH2Q8IVE3 1493 aa17.14■□□□□ 0.33
PTP4A2-216ENST00000534796 CDC42BPAQ5VT25 1732 aa17.14■□□□□ 0.33
PTP4A2-216ENST00000534796 HSPA2P54652 639 aa17.14■□□□□ 0.33
PTP4A2-216ENST00000534796 ESF1Q9H501 851 aaKnown RBP17.14■□□□□ 0.33
PTP4A2-216ENST00000534796 CFDP1Q9UEE9 299 aaPredicted RBP17.14■□□□□ 0.33
PTP4A2-216ENST00000534796 CCNB3Q8WWL7 1395 aa17.14■□□□□ 0.33
PTP4A2-216ENST00000534796 FBXO41Q8TF61 875 aa17.13■□□□□ 0.33
PTP4A2-216ENST00000534796 ABCA6Q8N139 1617 aa17.13■□□□□ 0.33
PTP4A2-216ENST00000534796 KIAA1107Q9UPP5 1409 aa17.13■□□□□ 0.33
PTP4A2-216ENST00000534796 SPAG9O60271 1321 aaKnown RBP17.11■□□□□ 0.33
PTP4A2-216ENST00000534796 CEBPAP49715 358 aaPredicted RBP17.1■□□□□ 0.33
PTP4A2-216ENST00000534796 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
PTP4A2-216ENST00000534796 SAMD9LQ8IVG5 1584 aa17.1■□□□□ 0.33
PTP4A2-216ENST00000534796 CEP162Q5TB80 1403 aa17.09■□□□□ 0.33
PTP4A2-216ENST00000534796 SYCP2Q9BX26 1530 aa17.09■□□□□ 0.33
PTP4A2-216ENST00000534796 UHRF1BP1Q6BDS2 1440 aa17.08■□□□□ 0.32
PTP4A2-216ENST00000534796 CNTLNQ9NXG0 1405 aa17.08■□□□□ 0.32
PTP4A2-216ENST00000534796 HNRNPMP52272 730 aaKnown RBP eCLIP17.08■□□□□ 0.32
PTP4A2-216ENST00000534796 KIDINS220Q9ULH0 1771 aa17.07■□□□□ 0.32
PTP4A2-216ENST00000534796 PREX1Q8TCU6 1659 aa17.07■□□□□ 0.32
PTP4A2-216ENST00000534796 EHBP1L1Q8N3D4 1523 aa17.06■□□□□ 0.32
PTP4A2-216ENST00000534796 ATP7AQ04656 1500 aa17.03■□□□□ 0.32
PTP4A2-216ENST00000534796 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.02■□□□□ 0.32
PTP4A2-216ENST00000534796 SETD1BQ9UPS6 1966 aaKnown RBP17.02■□□□□ 0.31
PTP4A2-216ENST00000534796 A2MP01023 1474 aa17■□□□□ 0.31
PTP4A2-216ENST00000534796 TIAM1Q13009 1591 aa17■□□□□ 0.31
PTP4A2-216ENST00000534796 INO80Q9ULG1 1556 aaPredicted RBP17■□□□□ 0.31
PTP4A2-216ENST00000534796 C3P01024 1663 aa16.99■□□□□ 0.31
PTP4A2-216ENST00000534796 NPATQ14207 1427 aa16.98■□□□□ 0.31
PTP4A2-216ENST00000534796 PLXNC1O60486 1568 aa16.98■□□□□ 0.31
PTP4A2-216ENST00000534796 ZNF644Q9H582 1327 aaPredicted RBP16.97■□□□□ 0.31
PTP4A2-216ENST00000534796 RSPH4AQ5TD94 716 aa16.97■□□□□ 0.31
PTP4A2-216ENST00000534796 CERKQ8TCT0 537 aa16.97■□□□□ 0.31
PTP4A2-216ENST00000534796 ZMYM3Q14202 1370 aa16.97■□□□□ 0.31
PTP4A2-216ENST00000534796 MBD5Q9P267 1494 aa16.97■□□□□ 0.31
PTP4A2-216ENST00000534796 RTEL1-TNFRSF6BF6WH68 1400 aa16.96■□□□□ 0.31
PTP4A2-216ENST00000534796 MROH2AA6NES4 1674 aa16.95■□□□□ 0.3
PTP4A2-216ENST00000534796 NCOA2Q15596 1464 aa16.95■□□□□ 0.3
PTP4A2-216ENST00000534796 SUPT6HQ7KZ85 1726 aaKnown RBP16.94■□□□□ 0.3
PTP4A2-216ENST00000534796 GGT6Q6P531 493 aa16.94■□□□□ 0.3
PTP4A2-216ENST00000534796 C1QBPQ07021 282 aaKnown RBP16.93■□□□□ 0.3
PTP4A2-216ENST00000534796 ADGBQ8N7X0 1667 aa16.93■□□□□ 0.3
PTP4A2-216ENST00000534796 PTPRTO14522 1441 aa16.93■□□□□ 0.3
PTP4A2-216ENST00000534796 VPS8Q8N3P4 1428 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms