RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 SUPT16HQ9Y5B9 1047 aaKnown RBP12.9□□□□□ -0.34
SORL1-213ENST00000534754 KANK4Q5T7N3 995 aaPredicted RBP12.89□□□□□ -0.35
SORL1-213ENST00000534754 CDC42BPBQ9Y5S2 1711 aa12.89□□□□□ -0.35
SORL1-213ENST00000534754 PLEKHD1A6NEE1 506 aa12.88□□□□□ -0.35
SORL1-213ENST00000534754 KCNH8Q96L42 1107 aa12.88□□□□□ -0.35
SORL1-213ENST00000534754 MTUS2Q5JR59 1369 aa12.87□□□□□ -0.35
SORL1-213ENST00000534754 PREX2Q70Z35 1606 aa12.86□□□□□ -0.35
SORL1-213ENST00000534754 CDK11AQ9UQ88 783 aaPredicted RBP12.85□□□□□ -0.35
SORL1-213ENST00000534754 NCOA2Q15596 1464 aa12.84□□□□□ -0.35
SORL1-213ENST00000534754 DHX57Q6P158 1386 aaKnown RBP12.84□□□□□ -0.35
SORL1-213ENST00000534754 ITSN2Q9NZM3 1697 aa12.84□□□□□ -0.35
SORL1-213ENST00000534754 FAM69CQ0P6D2 419 aa12.84□□□□□ -0.35
SORL1-213ENST00000534754 TRHP20396 242 aaPredicted RBP12.81□□□□□ -0.36
SORL1-213ENST00000534754 TSHZ2Q9NRE2 1034 aa12.8□□□□□ -0.36
SORL1-213ENST00000534754 CD109Q6YHK3 1445 aa12.8□□□□□ -0.36
SORL1-213ENST00000534754 GPATCH8Q9UKJ3 1502 aaKnown RBP12.8□□□□□ -0.36
SORL1-213ENST00000534754 ARAP3Q8WWN8 1544 aa12.78□□□□□ -0.36
SORL1-213ENST00000534754 ANP32EQ9BTT0 268 aa12.78□□□□□ -0.36
SORL1-213ENST00000534754 PHLDB1Q86UU1 1377 aa12.77□□□□□ -0.36
SORL1-213ENST00000534754 SAMD9LQ8IVG5 1584 aa12.77□□□□□ -0.37
SORL1-213ENST00000534754 ARHGAP5Q13017 1502 aa12.77□□□□□ -0.37
SORL1-213ENST00000534754 PLCH2O75038 1416 aa12.77□□□□□ -0.37
SORL1-213ENST00000534754 CFAP74Q9C0B2 1584 aa12.76□□□□□ -0.37
SORL1-213ENST00000534754 CCNB3Q8WWL7 1395 aa12.75□□□□□ -0.37
SORL1-213ENST00000534754 FANCAO15360 1455 aa12.74□□□□□ -0.37
SORL1-213ENST00000534754 MYOM3Q5VTT5 1437 aa12.74□□□□□ -0.37
SORL1-213ENST00000534754 PTPN23Q9H3S7 1636 aa12.73□□□□□ -0.37
SORL1-213ENST00000534754 RICTORQ6R327 1708 aa12.73□□□□□ -0.37
SORL1-213ENST00000534754 TEX14Q8IWB6 1497 aa12.73□□□□□ -0.37
SORL1-213ENST00000534754 ABCC1P33527 1531 aa12.72□□□□□ -0.37
SORL1-213ENST00000534754 FRMPD1Q5SYB0 1578 aa12.71□□□□□ -0.37
SORL1-213ENST00000534754 NEO1Q92859 1461 aa12.71□□□□□ -0.37
SORL1-213ENST00000534754 RRBP1Q9P2E9 1410 aaKnown RBP12.71□□□□□ -0.37
SORL1-213ENST00000534754 CAMSAP2Q08AD1 1489 aa12.71□□□□□ -0.38
SORL1-213ENST00000534754 SYCP2Q9BX26 1530 aa12.7□□□□□ -0.38
SORL1-213ENST00000534754 ARHGEF12Q9NZN5 1544 aa12.7□□□□□ -0.38
SORL1-213ENST00000534754 FGD6Q6ZV73 1430 aa12.7□□□□□ -0.38
SORL1-213ENST00000534754 COL17A1Q9UMD9 1497 aaPredicted RBP12.7□□□□□ -0.38
SORL1-213ENST00000534754 KDM6BO15054 1643 aa12.69□□□□□ -0.38
SORL1-213ENST00000534754 AKNAQ7Z591 1439 aa12.69□□□□□ -0.38
SORL1-213ENST00000534754 ZNF644Q9H582 1327 aaPredicted RBP12.69□□□□□ -0.38
SORL1-213ENST00000534754 CROCC2H7BZ55 1655 aa12.68□□□□□ -0.38
SORL1-213ENST00000534754 CFDP1Q9UEE9 299 aaPredicted RBP12.68□□□□□ -0.38
SORL1-213ENST00000534754 ADGRL1O94910 1474 aa12.68□□□□□ -0.38
SORL1-213ENST00000534754 MIA2Q96PC5 1412 aa12.68□□□□□ -0.38
SORL1-213ENST00000534754 TCOF1Q13428 1488 aaKnown RBP12.67□□□□□ -0.38
SORL1-213ENST00000534754 EFCAB2Q5VUJ9 269 aa12.66□□□□□ -0.38
SORL1-213ENST00000534754 ZNF777Q9ULD5 760 aaPredicted RBP12.66□□□□□ -0.38
SORL1-213ENST00000534754 DNMT1P26358 1616 aaKnown RBP12.65□□□□□ -0.38
SORL1-213ENST00000534754 MBD5Q9P267 1494 aa12.65□□□□□ -0.39
SORL1-213ENST00000534754 ARHGEF5Q12774 1597 aa12.65□□□□□ -0.39
SORL1-213ENST00000534754 SCAPERQ9BY12 1400 aa12.64□□□□□ -0.39
SORL1-213ENST00000534754 KDM5CP41229 1560 aa12.64□□□□□ -0.39
SORL1-213ENST00000534754 POGZQ7Z3K3 1410 aa12.63□□□□□ -0.39
SORL1-213ENST00000534754 TRAPPC8Q9Y2L5 1435 aa12.63□□□□□ -0.39
SORL1-213ENST00000534754 KIDINS220Q9ULH0 1771 aa12.63□□□□□ -0.39
SORL1-213ENST00000534754 PLEKHH2Q8IVE3 1493 aa12.63□□□□□ -0.39
SORL1-213ENST00000534754 KIAA1107Q9UPP5 1409 aa12.62□□□□□ -0.39
SORL1-213ENST00000534754 DENND4BO75064 1496 aaPredicted RBP12.62□□□□□ -0.39
SORL1-213ENST00000534754 ZMYM4Q5VZL5 1548 aa12.61□□□□□ -0.39
SORL1-213ENST00000534754 INO80Q9ULG1 1556 aaPredicted RBP12.61□□□□□ -0.39
SORL1-213ENST00000534754 HECW2Q9P2P5 1572 aa12.61□□□□□ -0.39
SORL1-213ENST00000534754 HNRNPMP52272 730 aaKnown RBP eCLIP12.61□□□□□ -0.39
SORL1-213ENST00000534754 ADGBQ8N7X0 1667 aa12.6□□□□□ -0.39
SORL1-213ENST00000534754 RAPGEF3O95398 923 aa12.6□□□□□ -0.39
SORL1-213ENST00000534754 ZNF518AQ6AHZ1 1483 aa12.6□□□□□ -0.39
SORL1-213ENST00000534754 BCL11AQ9H165 835 aa12.6□□□□□ -0.39
SORL1-213ENST00000534754 CCDC141Q6ZP82 1450 aa12.59□□□□□ -0.39
SORL1-213ENST00000534754 ZFYVE16Q7Z3T8 1539 aa12.59□□□□□ -0.39
SORL1-213ENST00000534754 FKBP8Q14318 412 aa12.59□□□□□ -0.39
SORL1-213ENST00000534754 ABCA6Q8N139 1617 aa12.59□□□□□ -0.39
SORL1-213ENST00000534754 SIGLEC1Q9BZZ2 1709 aa12.59□□□□□ -0.39
SORL1-213ENST00000534754 BCANQ96GW7 911 aa12.58□□□□□ -0.39
SORL1-213ENST00000534754 AFAP1Q8N556 730 aa12.58□□□□□ -0.4
SORL1-213ENST00000534754 ABCC5O15440 1437 aa12.58□□□□□ -0.4
SORL1-213ENST00000534754 DAPK1P53355 1430 aa12.58□□□□□ -0.4
SORL1-213ENST00000534754 MAST1Q9Y2H9 1570 aa12.58□□□□□ -0.4
SORL1-213ENST00000534754 FAM50AQ14320 339 aaKnown RBP12.57□□□□□ -0.4
SORL1-213ENST00000534754 ATP7AQ04656 1500 aa12.57□□□□□ -0.4
SORL1-213ENST00000534754 ARHGEF40Q8TER5 1519 aa12.56□□□□□ -0.4
SORL1-213ENST00000534754 PTPRKQ15262 1439 aa12.56□□□□□ -0.4
SORL1-213ENST00000534754 RAB3GAP2Q9H2M9 1393 aa12.56□□□□□ -0.4
SORL1-213ENST00000534754 NEFLP07196 543 aa12.56□□□□□ -0.4
SORL1-213ENST00000534754 DIP2CQ9Y2E4 1556 aa12.56□□□□□ -0.4
SORL1-213ENST00000534754 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.56□□□□□ -0.4
SORL1-213ENST00000534754 SHANK2Q9UPX8 1470 aa12.55□□□□□ -0.4
SORL1-213ENST00000534754 PLXNC1O60486 1568 aa12.54□□□□□ -0.4
SORL1-213ENST00000534754 MLH3Q9UHC1 1453 aa12.54□□□□□ -0.4
SORL1-213ENST00000534754 YEATS2Q9ULM3 1422 aa12.54□□□□□ -0.4
SORL1-213ENST00000534754 ITGAEP38570 1179 aa12.53□□□□□ -0.4
SORL1-213ENST00000534754 C9orf84Q5VXU9 1444 aa12.53□□□□□ -0.4
SORL1-213ENST00000534754 DDX10Q13206 875 aaKnown RBP12.52□□□□□ -0.41
SORL1-213ENST00000534754 RBM19Q9Y4C8 960 aaKnown RBP12.52□□□□□ -0.41
SORL1-213ENST00000534754 GCC2Q8IWJ2 1684 aa12.51□□□□□ -0.41
SORL1-213ENST00000534754 MAGI2Q86UL8 1455 aa12.51□□□□□ -0.41
SORL1-213ENST00000534754 SETD5Q9C0A6 1442 aa12.51□□□□□ -0.41
SORL1-213ENST00000534754 SPAG9O60271 1321 aaKnown RBP12.5□□□□□ -0.41
SORL1-213ENST00000534754 CCER2I3L3R5 266 aa12.5□□□□□ -0.41
SORL1-213ENST00000534754 ADGRL2O95490 1459 aa12.5□□□□□ -0.41
SORL1-213ENST00000534754 RTEL1-TNFRSF6BF6WH68 1400 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms