RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 RIMS1Q86UR5 1692 aaKnown RBP13.76□□□□□ -0.21
RPUSD4-209ENST00000534393 KIF14Q15058 1648 aa13.76□□□□□ -0.21
RPUSD4-209ENST00000534393 CLIP1P30622 1438 aa13.76□□□□□ -0.21
RPUSD4-209ENST00000534393 SCAPERQ9BY12 1400 aa13.76□□□□□ -0.21
RPUSD4-209ENST00000534393 TROQ12816 1431 aaPredicted RBP13.74□□□□□ -0.21
RPUSD4-209ENST00000534393 LRRIQ1Q96JM4 1722 aa13.73□□□□□ -0.21
RPUSD4-209ENST00000534393 PCF11O94913 1555 aaKnown RBP13.72□□□□□ -0.21
RPUSD4-209ENST00000534393 YEATS2Q9ULM3 1422 aa13.72□□□□□ -0.21
RPUSD4-209ENST00000534393 FER1L4A9Z1Z3 1794 aa13.71□□□□□ -0.21
RPUSD4-209ENST00000534393 CCDC18Q5T9S5 1454 aa13.71□□□□□ -0.21
RPUSD4-209ENST00000534393 ARHGAP5Q13017 1502 aa13.7□□□□□ -0.22
RPUSD4-209ENST00000534393 ATP10AO60312 1499 aa13.7□□□□□ -0.22
RPUSD4-209ENST00000534393 ZNF518AQ6AHZ1 1483 aa13.7□□□□□ -0.22
RPUSD4-209ENST00000534393 SIGLEC1Q9BZZ2 1709 aa13.69□□□□□ -0.22
RPUSD4-209ENST00000534393 CDC42BPBQ9Y5S2 1711 aa13.69□□□□□ -0.22
RPUSD4-209ENST00000534393 LMTK3Q96Q04 1460 aa13.68□□□□□ -0.22
RPUSD4-209ENST00000534393 C9orf84Q5VXU9 1444 aa13.68□□□□□ -0.22
RPUSD4-209ENST00000534393 CASKIN1Q8WXD9 1431 aa13.68□□□□□ -0.22
RPUSD4-209ENST00000534393 SETD1BQ9UPS6 1966 aaKnown RBP13.67□□□□□ -0.22
RPUSD4-209ENST00000534393 KDM5CP41229 1560 aa13.66□□□□□ -0.22
RPUSD4-209ENST00000534393 PREX2Q70Z35 1606 aa13.66□□□□□ -0.22
RPUSD4-209ENST00000534393 MLECQ14165 292 aa13.65□□□□□ -0.22
RPUSD4-209ENST00000534393 ARHGEF12Q9NZN5 1544 aa13.64□□□□□ -0.23
RPUSD4-209ENST00000534393 FYCO1Q9BQS8 1478 aa13.64□□□□□ -0.23
RPUSD4-209ENST00000534393 MYT1LQ9UL68 1186 aa13.64□□□□□ -0.23
RPUSD4-209ENST00000534393 AFAP1Q8N556 730 aa13.63□□□□□ -0.23
RPUSD4-209ENST00000534393 FBXO41Q8TF61 875 aa13.63□□□□□ -0.23
RPUSD4-209ENST00000534393 CDC42BPAQ5VT25 1732 aa13.63□□□□□ -0.23
RPUSD4-209ENST00000534393 REREQ9P2R6 1566 aa13.62□□□□□ -0.23
RPUSD4-209ENST00000534393 MLH3Q9UHC1 1453 aa13.62□□□□□ -0.23
RPUSD4-209ENST00000534393 PLPPR3Q6T4P5 718 aa13.62□□□□□ -0.23
RPUSD4-209ENST00000534393 PREX1Q8TCU6 1659 aa13.61□□□□□ -0.23
RPUSD4-209ENST00000534393 ITSN2Q9NZM3 1697 aa13.61□□□□□ -0.23
RPUSD4-209ENST00000534393 ABCC1P33527 1531 aa13.6□□□□□ -0.23
RPUSD4-209ENST00000534393 DIP2CQ9Y2E4 1556 aa13.6□□□□□ -0.23
RPUSD4-209ENST00000534393 HSPA2P54652 639 aa13.58□□□□□ -0.24
RPUSD4-209ENST00000534393 ABCA6Q8N139 1617 aa13.57□□□□□ -0.24
RPUSD4-209ENST00000534393 ESF1Q9H501 851 aaKnown RBP13.57□□□□□ -0.24
RPUSD4-209ENST00000534393 AGLP35573 1532 aa13.57□□□□□ -0.24
RPUSD4-209ENST00000534393 TRAPPC8Q9Y2L5 1435 aa13.56□□□□□ -0.24
RPUSD4-209ENST00000534393 KIDINS220Q9ULH0 1771 aa13.56□□□□□ -0.24
RPUSD4-209ENST00000534393 DMRT2Q9Y5R5 561 aa13.54□□□□□ -0.24
RPUSD4-209ENST00000534393 PLEKHH2Q8IVE3 1493 aa13.54□□□□□ -0.24
RPUSD4-209ENST00000534393 C3P01024 1663 aa13.53□□□□□ -0.24
RPUSD4-209ENST00000534393 CEBPAP49715 358 aaPredicted RBP13.53□□□□□ -0.24
RPUSD4-209ENST00000534393 ZNF777Q9ULD5 760 aaPredicted RBP13.53□□□□□ -0.24
RPUSD4-209ENST00000534393 UHRF1BP1Q6BDS2 1440 aa13.53□□□□□ -0.24
RPUSD4-209ENST00000534393 GPATCH8Q9UKJ3 1502 aaKnown RBP13.53□□□□□ -0.24
RPUSD4-209ENST00000534393 SAMD9LQ8IVG5 1584 aa13.53□□□□□ -0.24
RPUSD4-209ENST00000534393 CNTLNQ9NXG0 1405 aa13.52□□□□□ -0.25
RPUSD4-209ENST00000534393 KIAA1107Q9UPP5 1409 aa13.51□□□□□ -0.25
RPUSD4-209ENST00000534393 MTUS2Q5JR59 1369 aa13.51□□□□□ -0.25
RPUSD4-209ENST00000534393 CCNB3Q8WWL7 1395 aa13.51□□□□□ -0.25
RPUSD4-209ENST00000534393 SPAG9O60271 1321 aaKnown RBP13.51□□□□□ -0.25
RPUSD4-209ENST00000534393 CFDP1Q9UEE9 299 aaPredicted RBP13.51□□□□□ -0.25
RPUSD4-209ENST00000534393 SYCP2Q9BX26 1530 aa13.5□□□□□ -0.25
RPUSD4-209ENST00000534393 MROH2AA6NES4 1674 aa13.5□□□□□ -0.25
RPUSD4-209ENST00000534393 STRCQ7RTU9 1775 aa13.49□□□□□ -0.25
RPUSD4-209ENST00000534393 SUPT6HQ7KZ85 1726 aaKnown RBP13.48□□□□□ -0.25
RPUSD4-209ENST00000534393 HNRNPMP52272 730 aaKnown RBP eCLIP13.48□□□□□ -0.25
RPUSD4-209ENST00000534393 CERKQ8TCT0 537 aa13.48□□□□□ -0.25
RPUSD4-209ENST00000534393 ATP7AQ04656 1500 aa13.47□□□□□ -0.25
RPUSD4-209ENST00000534393 EHBP1L1Q8N3D4 1523 aa13.46□□□□□ -0.25
RPUSD4-209ENST00000534393 ADGBQ8N7X0 1667 aa13.46□□□□□ -0.26
RPUSD4-209ENST00000534393 INO80Q9ULG1 1556 aaPredicted RBP13.45□□□□□ -0.26
RPUSD4-209ENST00000534393 NPATQ14207 1427 aa13.44□□□□□ -0.26
RPUSD4-209ENST00000534393 A2MP01023 1474 aa13.43□□□□□ -0.26
RPUSD4-209ENST00000534393 PLXNC1O60486 1568 aa13.43□□□□□ -0.26
RPUSD4-209ENST00000534393 TIAM1Q13009 1591 aa13.43□□□□□ -0.26
RPUSD4-209ENST00000534393 CEP162Q5TB80 1403 aa13.43□□□□□ -0.26
RPUSD4-209ENST00000534393 PPP6R1Q9UPN7 881 aa13.43□□□□□ -0.26
RPUSD4-209ENST00000534393 PTPRTO14522 1441 aa13.42□□□□□ -0.26
RPUSD4-209ENST00000534393 CLTCQ00610 1675 aaKnown RBP13.42□□□□□ -0.26
RPUSD4-209ENST00000534393 ZMYM3Q14202 1370 aa13.42□□□□□ -0.26
RPUSD4-209ENST00000534393 RTEL1-TNFRSF6BF6WH68 1400 aa13.4□□□□□ -0.26
RPUSD4-209ENST00000534393 RSPH4AQ5TD94 716 aa13.4□□□□□ -0.26
RPUSD4-209ENST00000534393 MBD5Q9P267 1494 aa13.38□□□□□ -0.27
RPUSD4-209ENST00000534393 GGT6Q6P531 493 aa13.38□□□□□ -0.27
RPUSD4-209ENST00000534393 NCOA1Q15788 1441 aa13.38□□□□□ -0.27
RPUSD4-209ENST00000534393 ZNF644Q9H582 1327 aaPredicted RBP13.38□□□□□ -0.27
RPUSD4-209ENST00000534393 ZNF142P52746 1687 aaPredicted RBP13.37□□□□□ -0.27
RPUSD4-209ENST00000534393 CAMSAP1Q5T5Y3 1602 aa13.36□□□□□ -0.27
RPUSD4-209ENST00000534393 NCOA2Q15596 1464 aa13.36□□□□□ -0.27
RPUSD4-209ENST00000534393 CCDC141Q6ZP82 1450 aa13.35□□□□□ -0.27
RPUSD4-209ENST00000534393 MYO3AQ8NEV4 1616 aa13.35□□□□□ -0.27
RPUSD4-209ENST00000534393 DHX29Q7Z478 1369 aaKnown RBP13.34□□□□□ -0.27
RPUSD4-209ENST00000534393 IQSEC2Q5JU85 1478 aa13.34□□□□□ -0.27
RPUSD4-209ENST00000534393 FAM135AQ9P2D6 1515 aa13.34□□□□□ -0.27
RPUSD4-209ENST00000534393 PTPRKQ15262 1439 aa13.33□□□□□ -0.28
RPUSD4-209ENST00000534393 CAMSAP2Q08AD1 1489 aa13.33□□□□□ -0.28
RPUSD4-209ENST00000534393 CEP170BQ9Y4F5 1589 aaPredicted RBP13.32□□□□□ -0.28
RPUSD4-209ENST00000534393 PLA2R1Q13018 1463 aa13.32□□□□□ -0.28
RPUSD4-209ENST00000534393 PKD2Q13563 968 aa13.32□□□□□ -0.28
RPUSD4-209ENST00000534393 ARHGEF5Q12774 1597 aa13.32□□□□□ -0.28
RPUSD4-209ENST00000534393 TSPY4P0CV99 314 aa13.31□□□□□ -0.28
RPUSD4-209ENST00000534393 TSPY10P0CW01 314 aa13.31□□□□□ -0.28
RPUSD4-209ENST00000534393 LTBP4Q8N2S1 1624 aa13.31□□□□□ -0.28
RPUSD4-209ENST00000534393 VPS8Q8N3P4 1428 aa13.3□□□□□ -0.28
RPUSD4-209ENST00000534393 KIF3BO15066 747 aa13.3□□□□□ -0.28
RPUSD4-209ENST00000534393 MAP3K1Q13233 1512 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms