RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 POGZQ7Z3K3 1410 aa37.44■■■■□ 3.58
YIF1A-213ENST00000534374 ARHGEF40Q8TER5 1519 aa37.43■■■■□ 3.58
YIF1A-213ENST00000534374 ARHGAP5Q13017 1502 aa37.42■■■■□ 3.58
YIF1A-213ENST00000534374 HECW2Q9P2P5 1572 aa37.4■■■■□ 3.58
YIF1A-213ENST00000534374 CEP162Q5TB80 1403 aa37.39■■■■□ 3.58
YIF1A-213ENST00000534374 ADAMTSL3P82987 1691 aa37.37■■■■□ 3.57
YIF1A-213ENST00000534374 ZFYVE16Q7Z3T8 1539 aa37.36■■■■□ 3.57
YIF1A-213ENST00000534374 YEATS2Q9ULM3 1422 aa37.36■■■■□ 3.57
YIF1A-213ENST00000534374 CDC42BPBQ9Y5S2 1711 aa37.34■■■■□ 3.57
YIF1A-213ENST00000534374 AFAP1Q8N556 730 aa37.32■■■■□ 3.56
YIF1A-213ENST00000534374 BCORL1Q5H9F3 1711 aa37.32■■■■□ 3.56
YIF1A-213ENST00000534374 ZNF518AQ6AHZ1 1483 aa37.32■■■■□ 3.56
YIF1A-213ENST00000534374 LOC105371045A0A1W2PR82 267 aa37.3■■■■□ 3.56
YIF1A-213ENST00000534374 PREX2Q70Z35 1606 aa37.28■■■■□ 3.56
YIF1A-213ENST00000534374 PTPRMP28827 1452 aa37.26■■■■□ 3.56
YIF1A-213ENST00000534374 ATP10AO60312 1499 aa37.26■■■■□ 3.55
YIF1A-213ENST00000534374 MTUS2Q5JR59 1369 aa37.23■■■■□ 3.55
YIF1A-213ENST00000534374 CDC42BPAQ5VT25 1732 aa37.22■■■■□ 3.55
YIF1A-213ENST00000534374 KDM5CP41229 1560 aa37.21■■■■□ 3.55
YIF1A-213ENST00000534374 GPATCH8Q9UKJ3 1502 aaKnown RBP37.21■■■■□ 3.55
YIF1A-213ENST00000534374 C9orf84Q5VXU9 1444 aa37.18■■■■□ 3.54
YIF1A-213ENST00000534374 ARHGEF12Q9NZN5 1544 aa37.17■■■■□ 3.54
YIF1A-213ENST00000534374 MADDQ8WXG6 1647 aa37.17■■■■□ 3.54
YIF1A-213ENST00000534374 ABCC1P33527 1531 aa37.16■■■■□ 3.54
YIF1A-213ENST00000534374 MYT1LQ9UL68 1186 aa37.16■■■■□ 3.54
YIF1A-213ENST00000534374 TRAPPC8Q9Y2L5 1435 aa37.16■■■■□ 3.54
YIF1A-213ENST00000534374 MLH3Q9UHC1 1453 aa37.15■■■■□ 3.54
YIF1A-213ENST00000534374 ZNF777Q9ULD5 760 aaPredicted RBP37.15■■■■□ 3.54
YIF1A-213ENST00000534374 CFDP1Q9UEE9 299 aaPredicted RBP37.14■■■■□ 3.54
YIF1A-213ENST00000534374 CCNB3Q8WWL7 1395 aa37.14■■■■□ 3.54
YIF1A-213ENST00000534374 SIGLEC1Q9BZZ2 1709 aa37.13■■■■□ 3.53
YIF1A-213ENST00000534374 MLECQ14165 292 aa37.1■■■■□ 3.53
YIF1A-213ENST00000534374 ILDR1Q86SU0 546 aaPredicted RBP37.1■■■■□ 3.53
YIF1A-213ENST00000534374 ITSN2Q9NZM3 1697 aa37.08■■■■□ 3.53
YIF1A-213ENST00000534374 KIAA1107Q9UPP5 1409 aa37.06■■■■□ 3.52
YIF1A-213ENST00000534374 EHBP1L1Q8N3D4 1523 aa37.05■■■■□ 3.52
YIF1A-213ENST00000534374 HNRNPMP52272 730 aaKnown RBP eCLIP37.04■■■■□ 3.52
YIF1A-213ENST00000534374 SAMD9LQ8IVG5 1584 aa37.04■■■■□ 3.52
YIF1A-213ENST00000534374 RIMS1Q86UR5 1692 aaKnown RBP37.03■■■■□ 3.52
YIF1A-213ENST00000534374 PLEKHH2Q8IVE3 1493 aa37.03■■■■□ 3.52
YIF1A-213ENST00000534374 DIP2CQ9Y2E4 1556 aa37.01■■■■□ 3.52
YIF1A-213ENST00000534374 VPS8Q8N3P4 1428 aa37.01■■■■□ 3.51
YIF1A-213ENST00000534374 REREQ9P2R6 1566 aa37■■■■□ 3.51
YIF1A-213ENST00000534374 SPAG9O60271 1321 aaKnown RBP36.96■■■■□ 3.51
YIF1A-213ENST00000534374 SYCP2Q9BX26 1530 aa36.95■■■■□ 3.51
YIF1A-213ENST00000534374 KIDINS220Q9ULH0 1771 aa36.94■■■■□ 3.5
YIF1A-213ENST00000534374 ABCA6Q8N139 1617 aa36.94■■■■□ 3.5
YIF1A-213ENST00000534374 TIAM1Q13009 1591 aa36.92■■■■□ 3.5
YIF1A-213ENST00000534374 FER1L4A9Z1Z3 1794 aa36.91■■■■□ 3.5
YIF1A-213ENST00000534374 AGLP35573 1532 aa36.91■■■■□ 3.5
YIF1A-213ENST00000534374 ZNF644Q9H582 1327 aaPredicted RBP36.88■■■■□ 3.49
YIF1A-213ENST00000534374 PLPPR3Q6T4P5 718 aa36.87■■■■□ 3.49
YIF1A-213ENST00000534374 NCOA2Q15596 1464 aa36.87■■■■□ 3.49
YIF1A-213ENST00000534374 SUPT6HQ7KZ85 1726 aaKnown RBP36.85■■■■□ 3.49
YIF1A-213ENST00000534374 LMTK3Q96Q04 1460 aa36.83■■■■□ 3.49
YIF1A-213ENST00000534374 MAP3K1Q13233 1512 aa36.82■■■■□ 3.48
YIF1A-213ENST00000534374 LRRC9Q6ZRR7 1453 aa36.81■■■■□ 3.48
YIF1A-213ENST00000534374 MBD5Q9P267 1494 aa36.81■■■■□ 3.48
YIF1A-213ENST00000534374 RSPH4AQ5TD94 716 aa36.79■■■■□ 3.48
YIF1A-213ENST00000534374 ATP7AQ04656 1500 aa36.78■■■■□ 3.48
YIF1A-213ENST00000534374 CEBPAP49715 358 aaPredicted RBP36.77■■■■□ 3.48
YIF1A-213ENST00000534374 ESF1Q9H501 851 aaKnown RBP36.77■■■■□ 3.48
YIF1A-213ENST00000534374 INO80Q9ULG1 1556 aaPredicted RBP36.74■■■■□ 3.47
YIF1A-213ENST00000534374 KANK4Q5T7N3 995 aaPredicted RBP36.73■■■■□ 3.47
YIF1A-213ENST00000534374 SETD1BQ9UPS6 1966 aaKnown RBP36.73■■■■□ 3.47
YIF1A-213ENST00000534374 RTEL1-TNFRSF6BF6WH68 1400 aa36.72■■■■□ 3.47
YIF1A-213ENST00000534374 A2MP01023 1474 aa36.69■■■■□ 3.46
YIF1A-213ENST00000534374 CNTLNQ9NXG0 1405 aa36.68■■■■□ 3.46
YIF1A-213ENST00000534374 HSPA2P54652 639 aa36.66■■■■□ 3.46
YIF1A-213ENST00000534374 CAMSAP2Q08AD1 1489 aa36.65■■■■□ 3.46
YIF1A-213ENST00000534374 APLP2Q06481 763 aa36.65■■■■□ 3.46
YIF1A-213ENST00000534374 FBXO41Q8TF61 875 aa36.64■■■■□ 3.46
YIF1A-213ENST00000534374 PLXNC1O60486 1568 aa36.63■■■■□ 3.45
YIF1A-213ENST00000534374 CCDC141Q6ZP82 1450 aa36.62■■■■□ 3.45
YIF1A-213ENST00000534374 PPP6R1Q9UPN7 881 aa36.61■■■■□ 3.45
YIF1A-213ENST00000534374 ADGBQ8N7X0 1667 aa36.59■■■■□ 3.45
YIF1A-213ENST00000534374 DHX29Q7Z478 1369 aaKnown RBP36.58■■■■□ 3.45
YIF1A-213ENST00000534374 TSPY4P0CV99 314 aa36.58■■■■□ 3.45
YIF1A-213ENST00000534374 TSPY10P0CW01 314 aa36.58■■■■□ 3.45
YIF1A-213ENST00000534374 C3P01024 1663 aa36.56■■■■□ 3.44
YIF1A-213ENST00000534374 PREX1Q8TCU6 1659 aa36.56■■■■□ 3.44
YIF1A-213ENST00000534374 GGT6Q6P531 493 aa36.56■■■■□ 3.44
YIF1A-213ENST00000534374 MIA2Q96PC5 1412 aa36.55■■■■□ 3.44
YIF1A-213ENST00000534374 ARHGEF5Q12774 1597 aa36.54■■■■□ 3.44
YIF1A-213ENST00000534374 ZMYM3Q14202 1370 aa36.53■■■■□ 3.44
YIF1A-213ENST00000534374 MYOM3Q5VTT5 1437 aa36.52■■■■□ 3.44
YIF1A-213ENST00000534374 UHRF1BP1Q6BDS2 1440 aa36.52■■■■□ 3.44
YIF1A-213ENST00000534374 MROH2AA6NES4 1674 aa36.48■■■■□ 3.43
YIF1A-213ENST00000534374 NPATQ14207 1427 aa36.44■■■■□ 3.42
YIF1A-213ENST00000534374 KIF3BO15066 747 aa36.43■■■■□ 3.42
YIF1A-213ENST00000534374 CLTCQ00610 1675 aaKnown RBP36.38■■■■□ 3.41
YIF1A-213ENST00000534374 DMRT2Q9Y5R5 561 aa36.37■■■■□ 3.41
YIF1A-213ENST00000534374 MAST1Q9Y2H9 1570 aa36.35■■■■□ 3.41
YIF1A-213ENST00000534374 PTPRKQ15262 1439 aa36.31■■■■□ 3.4
YIF1A-213ENST00000534374 FAM135AQ9P2D6 1515 aa36.27■■■■□ 3.4
YIF1A-213ENST00000534374 WASHC2CQ9Y4E1 1318 aa36.27■■■■□ 3.4
YIF1A-213ENST00000534374 STRCQ7RTU9 1775 aa36.26■■■■□ 3.4
YIF1A-213ENST00000534374 CERKQ8TCT0 537 aa36.26■■■■□ 3.4
YIF1A-213ENST00000534374 FGD6Q6ZV73 1430 aa36.24■■■■□ 3.39
YIF1A-213ENST00000534374 PTPN23Q9H3S7 1636 aa36.23■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms