RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 RIMS1Q86UR5 1692 aaKnown RBP35.3■■■■□ 3.24
SSH3-211ENST00000534112 EFCAB2Q5VUJ9 269 aa35.3■■■■□ 3.24
SSH3-211ENST00000534112 PLPPR3Q6T4P5 718 aa35.3■■■■□ 3.24
SSH3-211ENST00000534112 ARHGAP35Q9NRY4 1499 aa35.29■■■■□ 3.24
SSH3-211ENST00000534112 MLECQ14165 292 aa35.28■■■■□ 3.24
SSH3-211ENST00000534112 HECW1Q76N89 1606 aa35.28■■■■□ 3.24
SSH3-211ENST00000534112 HSPA2P54652 639 aa35.24■■■■□ 3.23
SSH3-211ENST00000534112 CHIC1Q5VXU3 224 aa35.23■■■■□ 3.23
SSH3-211ENST00000534112 SIGLEC1Q9BZZ2 1709 aa35.23■■■■□ 3.23
SSH3-211ENST00000534112 ATP10AO60312 1499 aa35.18■■■■□ 3.22
SSH3-211ENST00000534112 TROQ12816 1431 aaPredicted RBP35.15■■■■□ 3.22
SSH3-211ENST00000534112 C9orf84Q5VXU9 1444 aa35.13■■■■□ 3.21
SSH3-211ENST00000534112 AFAP1Q8N556 730 aa35.12■■■■□ 3.21
SSH3-211ENST00000534112 KIF14Q15058 1648 aa35.11■■■■□ 3.21
SSH3-211ENST00000534112 MYO5CQ9NQX4 1742 aa35.1■■■■□ 3.21
SSH3-211ENST00000534112 CLIP1P30622 1438 aa35.09■■■■□ 3.21
SSH3-211ENST00000534112 ZNF518AQ6AHZ1 1483 aa35.07■■■■□ 3.2
SSH3-211ENST00000534112 ARHGAP5Q13017 1502 aa35.06■■■■□ 3.2
SSH3-211ENST00000534112 ARHGEF12Q9NZN5 1544 aa35.06■■■■□ 3.2
SSH3-211ENST00000534112 FER1L4A9Z1Z3 1794 aa35.03■■■■□ 3.2
SSH3-211ENST00000534112 CEBPAP49715 358 aaPredicted RBP35.02■■■■□ 3.2
SSH3-211ENST00000534112 MYT1LQ9UL68 1186 aa35.02■■■■□ 3.2
SSH3-211ENST00000534112 KDM5CP41229 1560 aa34.98■■■■□ 3.19
SSH3-211ENST00000534112 CASKIN1Q8WXD9 1431 aa34.93■■■■□ 3.18
SSH3-211ENST00000534112 LRRIQ1Q96JM4 1722 aa34.92■■■■□ 3.18
SSH3-211ENST00000534112 CERKQ8TCT0 537 aa34.91■■■■□ 3.18
SSH3-211ENST00000534112 MLH3Q9UHC1 1453 aa34.9■■■■□ 3.18
SSH3-211ENST00000534112 CCDC18Q5T9S5 1454 aa34.88■■■■□ 3.17
SSH3-211ENST00000534112 TRAPPC8Q9Y2L5 1435 aa34.88■■■■□ 3.17
SSH3-211ENST00000534112 DIP2CQ9Y2E4 1556 aa34.87■■■■□ 3.17
SSH3-211ENST00000534112 CDC42BPBQ9Y5S2 1711 aa34.86■■■■□ 3.17
SSH3-211ENST00000534112 REREQ9P2R6 1566 aa34.83■■■■□ 3.17
SSH3-211ENST00000534112 PREX1Q8TCU6 1659 aa34.81■■■■□ 3.16
SSH3-211ENST00000534112 ABCC1P33527 1531 aa34.81■■■■□ 3.16
SSH3-211ENST00000534112 PREX2Q70Z35 1606 aa34.8■■■■□ 3.16
SSH3-211ENST00000534112 UHRF1BP1Q6BDS2 1440 aa34.79■■■■□ 3.16
SSH3-211ENST00000534112 ABCA6Q8N139 1617 aa34.78■■■■□ 3.16
SSH3-211ENST00000534112 DMRT2Q9Y5R5 561 aa34.78■■■■□ 3.16
SSH3-211ENST00000534112 ESF1Q9H501 851 aaKnown RBP34.77■■■■□ 3.16
SSH3-211ENST00000534112 AGLP35573 1532 aa34.76■■■■□ 3.16
SSH3-211ENST00000534112 FYCO1Q9BQS8 1478 aa34.73■■■■□ 3.15
SSH3-211ENST00000534112 ZNF777Q9ULD5 760 aaPredicted RBP34.73■■■■□ 3.15
SSH3-211ENST00000534112 SETD1BQ9UPS6 1966 aaKnown RBP34.72■■■■□ 3.15
SSH3-211ENST00000534112 ITSN2Q9NZM3 1697 aa34.7■■■■□ 3.14
SSH3-211ENST00000534112 CDC42BPAQ5VT25 1732 aa34.66■■■■□ 3.14
SSH3-211ENST00000534112 GPATCH8Q9UKJ3 1502 aaKnown RBP34.65■■■■□ 3.14
SSH3-211ENST00000534112 STRCQ7RTU9 1775 aa34.65■■■■□ 3.14
SSH3-211ENST00000534112 KIDINS220Q9ULH0 1771 aa34.65■■■■□ 3.14
SSH3-211ENST00000534112 HNRNPMP52272 730 aaKnown RBP eCLIP34.64■■■■□ 3.14
SSH3-211ENST00000534112 SPAG9O60271 1321 aaKnown RBP34.63■■■■□ 3.13
SSH3-211ENST00000534112 C3P01024 1663 aa34.63■■■■□ 3.13
SSH3-211ENST00000534112 CNTLNQ9NXG0 1405 aa34.63■■■■□ 3.13
SSH3-211ENST00000534112 SAMD9LQ8IVG5 1584 aa34.62■■■■□ 3.13
SSH3-211ENST00000534112 CFDP1Q9UEE9 299 aaPredicted RBP34.59■■■■□ 3.13
SSH3-211ENST00000534112 PTPRTO14522 1441 aa34.57■■■■□ 3.13
SSH3-211ENST00000534112 SYCP2Q9BX26 1530 aa34.57■■■■□ 3.12
SSH3-211ENST00000534112 KIAA1107Q9UPP5 1409 aa34.55■■■■□ 3.12
SSH3-211ENST00000534112 CCNB3Q8WWL7 1395 aa34.53■■■■□ 3.12
SSH3-211ENST00000534112 ZMYM3Q14202 1370 aa34.52■■■■□ 3.12
SSH3-211ENST00000534112 PLEKHH2Q8IVE3 1493 aa34.5■■■■□ 3.11
SSH3-211ENST00000534112 MTUS2Q5JR59 1369 aa34.49■■■■□ 3.11
SSH3-211ENST00000534112 NPATQ14207 1427 aa34.48■■■■□ 3.11
SSH3-211ENST00000534112 NCOA1Q15788 1441 aa34.47■■■■□ 3.11
SSH3-211ENST00000534112 ATP7AQ04656 1500 aa34.45■■■■□ 3.11
SSH3-211ENST00000534112 A2MP01023 1474 aa34.43■■■■□ 3.1
SSH3-211ENST00000534112 GGT6Q6P531 493 aa34.41■■■■□ 3.1
SSH3-211ENST00000534112 ZNF644Q9H582 1327 aaPredicted RBP34.4■■■■□ 3.1
SSH3-211ENST00000534112 SUPT6HQ7KZ85 1726 aaKnown RBP34.39■■■■□ 3.1
SSH3-211ENST00000534112 MROH2AA6NES4 1674 aa34.39■■■■□ 3.1
SSH3-211ENST00000534112 INO80Q9ULG1 1556 aaPredicted RBP34.38■■■■□ 3.09
SSH3-211ENST00000534112 PLXNC1O60486 1568 aa34.37■■■■□ 3.09
SSH3-211ENST00000534112 LTBP4Q8N2S1 1624 aa34.36■■■■□ 3.09
SSH3-211ENST00000534112 CAMSAP1Q5T5Y3 1602 aa34.35■■■■□ 3.09
SSH3-211ENST00000534112 PPP6R1Q9UPN7 881 aa34.34■■■■□ 3.09
SSH3-211ENST00000534112 NCKAP5LQ9HCH0 1330 aa34.33■■■■□ 3.09
SSH3-211ENST00000534112 PTPRKQ15262 1439 aa34.31■■■■□ 3.08
SSH3-211ENST00000534112 MBD5Q9P267 1494 aa34.31■■■■□ 3.08
SSH3-211ENST00000534112 CLTCQ00610 1675 aaKnown RBP34.28■■■■□ 3.08
SSH3-211ENST00000534112 TIAM1Q13009 1591 aa34.28■■■■□ 3.08
SSH3-211ENST00000534112 DISP3Q9P2K9 1392 aa34.27■■■■□ 3.08
SSH3-211ENST00000534112 PKD2Q13563 968 aa34.26■■■■□ 3.08
SSH3-211ENST00000534112 CEP162Q5TB80 1403 aa34.26■■■■□ 3.07
SSH3-211ENST00000534112 IQSEC2Q5JU85 1478 aa34.25■■■■□ 3.07
SSH3-211ENST00000534112 EHBP1L1Q8N3D4 1523 aa34.25■■■■□ 3.07
SSH3-211ENST00000534112 RTEL1-TNFRSF6BF6WH68 1400 aa34.24■■■■□ 3.07
SSH3-211ENST00000534112 DHX29Q7Z478 1369 aaKnown RBP34.22■■■■□ 3.07
SSH3-211ENST00000534112 ZNF335Q9H4Z2 1342 aaPredicted RBP34.21■■■■□ 3.07
SSH3-211ENST00000534112 PLA2R1Q13018 1463 aa34.2■■■■□ 3.07
SSH3-211ENST00000534112 ADGBQ8N7X0 1667 aa34.19■■■■□ 3.06
SSH3-211ENST00000534112 ILDR2Q71H61 639 aa34.18■■■■□ 3.06
SSH3-211ENST00000534112 CEP170BQ9Y4F5 1589 aaPredicted RBP34.18■■■■□ 3.06
SSH3-211ENST00000534112 MYO3AQ8NEV4 1616 aa34.18■■■■□ 3.06
SSH3-211ENST00000534112 TCOF1Q13428 1488 aaKnown RBP34.16■■■■□ 3.06
SSH3-211ENST00000534112 KIF3BO15066 747 aa34.15■■■■□ 3.06
SSH3-211ENST00000534112 ZNF142P52746 1687 aaPredicted RBP34.15■■■■□ 3.06
SSH3-211ENST00000534112 RSPH4AQ5TD94 716 aa34.13■■■■□ 3.05
SSH3-211ENST00000534112 NCOA2Q15596 1464 aa34.1■■■■□ 3.05
SSH3-211ENST00000534112 A2ML1A8K2U0 1454 aa34.09■■■■□ 3.05
SSH3-211ENST00000534112 CCDC141Q6ZP82 1450 aa34.09■■■■□ 3.05
SSH3-211ENST00000534112 FBXO31Q5XUX0 539 aaPredicted RBP34.09■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms