RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 RGS3P49796 1198 aa8.21□□□□□ -1.09
UBQLN1-206ENST00000533705 ARHGAP35Q9NRY4 1499 aa8.21□□□□□ -1.09
UBQLN1-206ENST00000533705 TIMELESSQ9UNS1 1208 aa8.21□□□□□ -1.09
UBQLN1-206ENST00000533705 FOXD1Q16676 465 aa8.21□□□□□ -1.1
UBQLN1-206ENST00000533705 SMARCA2P51531 1590 aa8.2□□□□□ -1.1
UBQLN1-206ENST00000533705 CYB5RLQ6IPT4 315 aa8.2□□□□□ -1.1
UBQLN1-206ENST00000533705 NUTM2DQ5VT03 806 aaPredicted RBP8.2□□□□□ -1.1
UBQLN1-206ENST00000533705 TRIM44Q96DX7 344 aaPredicted RBP8.2□□□□□ -1.1
UBQLN1-206ENST00000533705 NUP155O75694 1391 aa8.19□□□□□ -1.1
UBQLN1-206ENST00000533705 WASHC2CQ9Y4E1 1318 aa8.19□□□□□ -1.1
UBQLN1-206ENST00000533705 TMX4Q9H1E5 349 aaPredicted RBP8.19□□□□□ -1.1
UBQLN1-206ENST00000533705 FMN1Q68DA7 1419 aa8.19□□□□□ -1.1
UBQLN1-206ENST00000533705 ANKRD30AQ9BXX3 1397 aa8.19□□□□□ -1.1
UBQLN1-206ENST00000533705 SETD5Q9C0A6 1442 aa8.18□□□□□ -1.1
UBQLN1-206ENST00000533705 HNRNPMP52272 730 aaKnown RBP eCLIP8.18□□□□□ -1.1
UBQLN1-206ENST00000533705 NGDNQ8NEJ9 315 aaKnown RBP8.18□□□□□ -1.1
UBQLN1-206ENST00000533705 CCDC88BA6NC98 1476 aa8.18□□□□□ -1.1
UBQLN1-206ENST00000533705 AEBP2Q6ZN18 517 aaPredicted RBP8.18□□□□□ -1.1
UBQLN1-206ENST00000533705 NUTM2FA1L443 756 aa8.17□□□□□ -1.1
UBQLN1-206ENST00000533705 PTMAP06454 111 aaKnown RBP8.17□□□□□ -1.1
UBQLN1-206ENST00000533705 SPAG9O60271 1321 aaKnown RBP8.17□□□□□ -1.1
UBQLN1-206ENST00000533705 U2AF1L5P0DN76 240 aaPredicted RBP8.17□□□□□ -1.1
UBQLN1-206ENST00000533705 U2AF1Q01081 240 aaKnown RBP eCLIP8.17□□□□□ -1.15e-6■■□□□ 12.9
UBQLN1-206ENST00000533705 PPP4R2Q9NY27 417 aa8.17□□□□□ -1.1
UBQLN1-206ENST00000533705 VPS8Q8N3P4 1428 aa8.16□□□□□ -1.1
UBQLN1-206ENST00000533705 HSPA5P11021 654 aaKnown RBP8.16□□□□□ -1.1
UBQLN1-206ENST00000533705 JPH4Q96JJ6 628 aa8.16□□□□□ -1.1
UBQLN1-206ENST00000533705 KTN1Q86UP2 1357 aaKnown RBP8.16□□□□□ -1.1
UBQLN1-206ENST00000533705 CALD1Q05682 793 aaKnown RBP8.16□□□□□ -1.1
UBQLN1-206ENST00000533705 KANK4Q5T7N3 995 aaPredicted RBP8.16□□□□□ -1.1
UBQLN1-206ENST00000533705 MPHOSPH9Q99550 1183 aa8.16□□□□□ -1.1
UBQLN1-206ENST00000533705 ROCK2O75116 1388 aaKnown RBP8.15□□□□□ -1.1
UBQLN1-206ENST00000533705 RSPH4AQ5TD94 716 aa8.15□□□□□ -1.1
UBQLN1-206ENST00000533705 APBB1O00213 710 aa8.15□□□□□ -1.1
UBQLN1-206ENST00000533705 HSP90AB1P08238 724 aaKnown RBP8.15□□□□□ -1.1
UBQLN1-206ENST00000533705 CADPSQ9ULU8 1353 aa8.15□□□□□ -1.11
UBQLN1-206ENST00000533705 MROH2BQ7Z745 1585 aa8.15□□□□□ -1.11
UBQLN1-206ENST00000533705 CLSTN1O94985 981 aa8.15□□□□□ -1.11
UBQLN1-206ENST00000533705 IPO8O15397 1037 aaKnown RBP8.15□□□□□ -1.11
UBQLN1-206ENST00000533705 CHMP4AQ9BY43 222 aa8.14□□□□□ -1.11
UBQLN1-206ENST00000533705 LTV1Q96GA3 475 aaPredicted RBP8.14□□□□□ -1.11
UBQLN1-206ENST00000533705 TERF2IPQ9NYB0 399 aa8.14□□□□□ -1.11
UBQLN1-206ENST00000533705 EIF3AQ14152 1382 aaKnown RBP8.14□□□□□ -1.11
UBQLN1-206ENST00000533705 MCCP23508 829 aa8.13□□□□□ -1.11
UBQLN1-206ENST00000533705 PLCB2Q00722 1185 aa8.13□□□□□ -1.11
UBQLN1-206ENST00000533705 OSCARQ8IYS5 282 aa8.13□□□□□ -1.11
UBQLN1-206ENST00000533705 GLIPR1L2Q4G1C9 344 aa8.13□□□□□ -1.11
UBQLN1-206ENST00000533705 AMPHP49418 695 aa8.13□□□□□ -1.11
UBQLN1-206ENST00000533705 NCBP3Q53F19 620 aaKnown RBP8.13□□□□□ -1.11
UBQLN1-206ENST00000533705 G3V3G9 751 aa8.13□□□□□ -1.11
UBQLN1-206ENST00000533705 DCAF8Q5TAQ9 597 aa8.13□□□□□ -1.11
UBQLN1-206ENST00000533705 CHMP3Q9Y3E7 222 aa8.12□□□□□ -1.11
UBQLN1-206ENST00000533705 UNC13AQ9UPW8 1703 aa8.12□□□□□ -1.11
UBQLN1-206ENST00000533705 GOLGA6L4A6NEF3 574 aa8.12□□□□□ -1.11
UBQLN1-206ENST00000533705 ABCC8Q09428 1581 aa8.12□□□□□ -1.11
UBQLN1-206ENST00000533705 GTF2E1P29083 439 aaPredicted RBP8.11□□□□□ -1.11
UBQLN1-206ENST00000533705 TAF7LQ5H9L4 462 aa8.11□□□□□ -1.11
UBQLN1-206ENST00000533705 GORABQ5T7V8 394 aa8.11□□□□□ -1.11
UBQLN1-206ENST00000533705 CFAP44Q96MT7 982 aa8.11□□□□□ -1.11
UBQLN1-206ENST00000533705 STK31Q9BXU1 1019 aa8.11□□□□□ -1.11
UBQLN1-206ENST00000533705 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.11□□□□□ -1.11
UBQLN1-206ENST00000533705 DNTTIP2Q5QJE6 756 aaKnown RBP8.11□□□□□ -1.11
UBQLN1-206ENST00000533705 GOLGA6L6A8MZA4 724 aa8.1□□□□□ -1.11
UBQLN1-206ENST00000533705 CCER2I3L3R5 266 aa8.1□□□□□ -1.11
UBQLN1-206ENST00000533705 RALBP1Q15311 655 aa8.1□□□□□ -1.11
UBQLN1-206ENST00000533705 B4GALNT3Q6L9W6 998 aa8.1□□□□□ -1.11
UBQLN1-206ENST00000533705 HSCBQ8IWL3 235 aa8.1□□□□□ -1.11
UBQLN1-206ENST00000533705 KIAA1211Q6ZU35 1233 aa8.1□□□□□ -1.11
UBQLN1-206ENST00000533705 CCDC18Q5T9S5 1454 aa8.1□□□□□ -1.11
UBQLN1-206ENST00000533705 TRAK1Q9UPV9 953 aa8.09□□□□□ -1.11
UBQLN1-206ENST00000533705 RAPGEF2Q9Y4G8 1499 aa8.09□□□□□ -1.11
UBQLN1-206ENST00000533705 EVA1CP58658 441 aa8.09□□□□□ -1.11
UBQLN1-206ENST00000533705 GNL2Q13823 731 aaKnown RBP8.09□□□□□ -1.11
UBQLN1-206ENST00000533705 FHOD3Q2V2M9 1422 aa8.09□□□□□ -1.11
UBQLN1-206ENST00000533705 RAB3GAP2Q9H2M9 1393 aa8.09□□□□□ -1.11
UBQLN1-206ENST00000533705 NRDCO43847 1150 aa8.09□□□□□ -1.11
UBQLN1-206ENST00000533705 MSH5O43196 834 aa8.08□□□□□ -1.12
UBQLN1-206ENST00000533705 HDAC5Q9UQL6 1122 aa8.08□□□□□ -1.12
UBQLN1-206ENST00000533705 ITPRIPQ8IWB1 547 aa8.08□□□□□ -1.12
UBQLN1-206ENST00000533705 PTPRGP23470 1445 aa8.07□□□□□ -1.12
UBQLN1-206ENST00000533705 FRAT2O75474 233 aaPredicted RBP8.07□□□□□ -1.12
UBQLN1-206ENST00000533705 MEX3CQ5U5Q3 659 aaKnown RBP8.07□□□□□ -1.12
UBQLN1-206ENST00000533705 FAM69CQ0P6D2 419 aa8.06□□□□□ -1.12
UBQLN1-206ENST00000533705 SLC4A10Q6U841 1118 aa8.06□□□□□ -1.12
UBQLN1-206ENST00000533705 L3MBTL2Q969R5 705 aa8.06□□□□□ -1.12
UBQLN1-206ENST00000533705 LMOD3Q0VAK6 560 aa8.06□□□□□ -1.12
UBQLN1-206ENST00000533705 RWDD1Q9H446 243 aaPredicted RBP8.06□□□□□ -1.12
UBQLN1-206ENST00000533705 SMC4Q9NTJ3 1288 aa8.05□□□□□ -1.12
UBQLN1-206ENST00000533705 TOP2AP11388 1531 aaKnown RBP8.05□□□□□ -1.12
UBQLN1-206ENST00000533705 RCAN3Q9UKA8 241 aa8.05□□□□□ -1.12
UBQLN1-206ENST00000533705 VGFO15240 615 aaPredicted RBP8.04□□□□□ -1.12
UBQLN1-206ENST00000533705 HMMRO75330 724 aa8.04□□□□□ -1.12
UBQLN1-206ENST00000533705 SPRYD3Q8NCJ5 442 aa8.04□□□□□ -1.12
UBQLN1-206ENST00000533705 GPATCH3Q96I76 525 aa8.04□□□□□ -1.12
UBQLN1-206ENST00000533705 CCDC146Q8IYE0 955 aa8.03□□□□□ -1.12
UBQLN1-206ENST00000533705 ATAD2BQ9ULI0 1458 aa8.03□□□□□ -1.12
UBQLN1-206ENST00000533705 NOP58Q9Y2X3 529 aaKnown RBP8.03□□□□□ -1.12
UBQLN1-206ENST00000533705 CCDC144AA2RUR9 1427 aa8.03□□□□□ -1.12
UBQLN1-206ENST00000533705 C1orf141Q5JVX7 400 aa8.03□□□□□ -1.12
UBQLN1-206ENST00000533705 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms