RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 SCAPERQ9BY12 1400 aa27.09■■□□□ 1.93
CTSB-229ENST00000533572 RICTORQ6R327 1708 aa27.07■■□□□ 1.92
CTSB-229ENST00000533572 PREX2Q70Z35 1606 aa27.06■■□□□ 1.92
CTSB-229ENST00000533572 POGZQ7Z3K3 1410 aa27.04■■□□□ 1.92
CTSB-229ENST00000533572 EHBP1L1Q8N3D4 1523 aa27.03■■□□□ 1.92
CTSB-229ENST00000533572 CDC42BPBQ9Y5S2 1711 aa27.02■■□□□ 1.92
CTSB-229ENST00000533572 ZMYM4Q5VZL5 1548 aa27■■□□□ 1.91
CTSB-229ENST00000533572 ARHGEF40Q8TER5 1519 aa27■■□□□ 1.91
CTSB-229ENST00000533572 CDC42BPAQ5VT25 1732 aa26.99■■□□□ 1.91
CTSB-229ENST00000533572 CCNB3Q8WWL7 1395 aa26.99■■□□□ 1.91
CTSB-229ENST00000533572 MAGI2Q86UL8 1455 aa26.98■■□□□ 1.91
CTSB-229ENST00000533572 ZFYVE16Q7Z3T8 1539 aa26.97■■□□□ 1.91
CTSB-229ENST00000533572 ARID4BQ4LE39 1312 aaPredicted RBP26.96■■□□□ 1.91
CTSB-229ENST00000533572 ZNF518AQ6AHZ1 1483 aa26.96■■□□□ 1.91
CTSB-229ENST00000533572 ZNF777Q9ULD5 760 aaPredicted RBP26.95■■□□□ 1.9
CTSB-229ENST00000533572 TIAM1Q13009 1591 aa26.95■■□□□ 1.9
CTSB-229ENST00000533572 GPATCH8Q9UKJ3 1502 aaKnown RBP26.95■■□□□ 1.9
CTSB-229ENST00000533572 MYT1LQ9UL68 1186 aa26.94■■□□□ 1.9
CTSB-229ENST00000533572 APLP2Q06481 763 aa26.93■■□□□ 1.9
CTSB-229ENST00000533572 CFDP1Q9UEE9 299 aaPredicted RBP26.93■■□□□ 1.9
CTSB-229ENST00000533572 ABCC1P33527 1531 aa26.93■■□□□ 1.9
CTSB-229ENST00000533572 YEATS2Q9ULM3 1422 aa26.9■■□□□ 1.9
CTSB-229ENST00000533572 MAP3K1Q13233 1512 aa26.9■■□□□ 1.9
CTSB-229ENST00000533572 ILDR1Q86SU0 546 aaPredicted RBP26.89■■□□□ 1.9
CTSB-229ENST00000533572 AFAP1Q8N556 730 aa26.89■■□□□ 1.9
CTSB-229ENST00000533572 SUPT6HQ7KZ85 1726 aaKnown RBP26.88■■□□□ 1.89
CTSB-229ENST00000533572 ITSN2Q9NZM3 1697 aa26.87■■□□□ 1.89
CTSB-229ENST00000533572 KDM5CP41229 1560 aa26.87■■□□□ 1.89
CTSB-229ENST00000533572 PLEKHH2Q8IVE3 1493 aa26.86■■□□□ 1.89
CTSB-229ENST00000533572 SAMD9LQ8IVG5 1584 aa26.85■■□□□ 1.89
CTSB-229ENST00000533572 HECW2Q9P2P5 1572 aa26.84■■□□□ 1.89
CTSB-229ENST00000533572 TRAPPC8Q9Y2L5 1435 aa26.84■■□□□ 1.89
CTSB-229ENST00000533572 NCOA2Q15596 1464 aa26.84■■□□□ 1.89
CTSB-229ENST00000533572 ARHGEF12Q9NZN5 1544 aa26.84■■□□□ 1.89
CTSB-229ENST00000533572 LRRC9Q6ZRR7 1453 aa26.83■■□□□ 1.89
CTSB-229ENST00000533572 SYCP2Q9BX26 1530 aa26.82■■□□□ 1.88
CTSB-229ENST00000533572 ATP10AO60312 1499 aa26.81■■□□□ 1.88
CTSB-229ENST00000533572 C9orf84Q5VXU9 1444 aa26.81■■□□□ 1.88
CTSB-229ENST00000533572 BCORL1Q5H9F3 1711 aa26.8■■□□□ 1.88
CTSB-229ENST00000533572 KIAA1107Q9UPP5 1409 aa26.79■■□□□ 1.88
CTSB-229ENST00000533572 MLH3Q9UHC1 1453 aa26.79■■□□□ 1.88
CTSB-229ENST00000533572 HNRNPMP52272 730 aaKnown RBP eCLIP26.78■■□□□ 1.88
CTSB-229ENST00000533572 ADAMTSL3P82987 1691 aa26.76■■□□□ 1.87
CTSB-229ENST00000533572 SPAG9O60271 1321 aaKnown RBP26.74■■□□□ 1.87
CTSB-229ENST00000533572 DIP2CQ9Y2E4 1556 aa26.73■■□□□ 1.87
CTSB-229ENST00000533572 KANK4Q5T7N3 995 aaPredicted RBP26.73■■□□□ 1.87
CTSB-229ENST00000533572 MLECQ14165 292 aa26.72■■□□□ 1.87
CTSB-229ENST00000533572 ABCA6Q8N139 1617 aa26.71■■□□□ 1.87
CTSB-229ENST00000533572 MADDQ8WXG6 1647 aa26.71■■□□□ 1.87
CTSB-229ENST00000533572 ZNF644Q9H582 1327 aaPredicted RBP26.7■■□□□ 1.87
CTSB-229ENST00000533572 SIGLEC1Q9BZZ2 1709 aa26.69■■□□□ 1.86
CTSB-229ENST00000533572 KIDINS220Q9ULH0 1771 aa26.68■■□□□ 1.86
CTSB-229ENST00000533572 PTPRMP28827 1452 aa26.68■■□□□ 1.86
CTSB-229ENST00000533572 CAMSAP2Q08AD1 1489 aa26.67■■□□□ 1.86
CTSB-229ENST00000533572 REREQ9P2R6 1566 aa26.67■■□□□ 1.86
CTSB-229ENST00000533572 ATP7AQ04656 1500 aa26.65■■□□□ 1.86
CTSB-229ENST00000533572 RIMS1Q86UR5 1692 aaKnown RBP26.65■■□□□ 1.86
CTSB-229ENST00000533572 MBD5Q9P267 1494 aa26.62■■□□□ 1.85
CTSB-229ENST00000533572 INO80Q9ULG1 1556 aaPredicted RBP26.62■■□□□ 1.85
CTSB-229ENST00000533572 MYOM3Q5VTT5 1437 aa26.61■■□□□ 1.85
CTSB-229ENST00000533572 CCDC141Q6ZP82 1450 aa26.61■■□□□ 1.85
CTSB-229ENST00000533572 FER1L4A9Z1Z3 1794 aa26.61■■□□□ 1.85
CTSB-229ENST00000533572 RSPH4AQ5TD94 716 aa26.6■■□□□ 1.85
CTSB-229ENST00000533572 AGLP35573 1532 aa26.6■■□□□ 1.85
CTSB-229ENST00000533572 MIA2Q96PC5 1412 aa26.58■■□□□ 1.85
CTSB-229ENST00000533572 PLPPR3Q6T4P5 718 aa26.57■■□□□ 1.84
CTSB-229ENST00000533572 ESF1Q9H501 851 aaKnown RBP26.55■■□□□ 1.84
CTSB-229ENST00000533572 RTEL1-TNFRSF6BF6WH68 1400 aa26.55■■□□□ 1.84
CTSB-229ENST00000533572 A2MP01023 1474 aa26.54■■□□□ 1.84
CTSB-229ENST00000533572 ARHGEF5Q12774 1597 aa26.54■■□□□ 1.84
CTSB-229ENST00000533572 TSPY4P0CV99 314 aa26.53■■□□□ 1.84
CTSB-229ENST00000533572 TSPY10P0CW01 314 aa26.53■■□□□ 1.84
CTSB-229ENST00000533572 ADGBQ8N7X0 1667 aa26.5■■□□□ 1.83
CTSB-229ENST00000533572 PLXNC1O60486 1568 aa26.47■■□□□ 1.83
CTSB-229ENST00000533572 PTPN23Q9H3S7 1636 aa26.44■■□□□ 1.82
CTSB-229ENST00000533572 FGD6Q6ZV73 1430 aa26.44■■□□□ 1.82
CTSB-229ENST00000533572 CNTLNQ9NXG0 1405 aa26.43■■□□□ 1.82
CTSB-229ENST00000533572 DHX29Q7Z478 1369 aaKnown RBP26.42■■□□□ 1.82
CTSB-229ENST00000533572 GGT6Q6P531 493 aa26.4■■□□□ 1.82
CTSB-229ENST00000533572 MAST1Q9Y2H9 1570 aa26.38■■□□□ 1.81
CTSB-229ENST00000533572 CEBPAP49715 358 aaPredicted RBP26.38■■□□□ 1.81
CTSB-229ENST00000533572 PPARGC1BQ86YN6 1023 aaKnown RBP26.37■■□□□ 1.81
CTSB-229ENST00000533572 TCOF1Q13428 1488 aaKnown RBP26.36■■□□□ 1.81
CTSB-229ENST00000533572 KIF3BO15066 747 aa26.34■■□□□ 1.81
CTSB-229ENST00000533572 PPP6R1Q9UPN7 881 aa26.33■■□□□ 1.81
CTSB-229ENST00000533572 LMTK3Q96Q04 1460 aa26.33■■□□□ 1.81
CTSB-229ENST00000533572 SHANK2Q9UPX8 1470 aa26.32■■□□□ 1.8
CTSB-229ENST00000533572 C3P01024 1663 aa26.31■■□□□ 1.8
CTSB-229ENST00000533572 MROH2AA6NES4 1674 aa26.31■■□□□ 1.8
CTSB-229ENST00000533572 ABCC5O15440 1437 aa26.31■■□□□ 1.8
CTSB-229ENST00000533572 DAPK1P53355 1430 aa26.31■■□□□ 1.8
CTSB-229ENST00000533572 DNMT1P26358 1616 aaKnown RBP26.3■■□□□ 1.8
CTSB-229ENST00000533572 FAM50AQ14320 339 aaKnown RBP26.3■■□□□ 1.8
CTSB-229ENST00000533572 CROCC2H7BZ55 1655 aa26.3■■□□□ 1.8
CTSB-229ENST00000533572 CLTCQ00610 1675 aaKnown RBP26.28■■□□□ 1.8
CTSB-229ENST00000533572 PREX1Q8TCU6 1659 aa26.28■■□□□ 1.8
CTSB-229ENST00000533572 ZMYM3Q14202 1370 aa26.27■■□□□ 1.8
CTSB-229ENST00000533572 SETD1BQ9UPS6 1966 aaKnown RBP26.26■■□□□ 1.79
CTSB-229ENST00000533572 UHRF1BP1Q6BDS2 1440 aa26.26■■□□□ 1.79
CTSB-229ENST00000533572 DUOX2Q9NRD8 1548 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms