RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 ABCA8O94911 1581 aa7.88□□□□□ -1.15
CKAP5-212ENST00000533413 UACAQ9BZF9 1416 aa7.87□□□□□ -1.15
CKAP5-212ENST00000533413 NEFLP07196 543 aa7.86□□□□□ -1.15
CKAP5-212ENST00000533413 RAPGEF6Q8TEU7 1601 aa7.85□□□□□ -1.15
CKAP5-212ENST00000533413 ZCCHC11Q5TAX3 1644 aaKnown RBP7.85□□□□□ -1.15
CKAP5-212ENST00000533413 NPM3O75607 178 aaKnown RBP7.85□□□□□ -1.15
CKAP5-212ENST00000533413 KDM5BQ9UGL1 1544 aa7.85□□□□□ -1.15
CKAP5-212ENST00000533413 KIF13AQ9H1H9 1805 aa7.84□□□□□ -1.15
CKAP5-212ENST00000533413 ARID3AQ99856 593 aa7.84□□□□□ -1.15
CKAP5-212ENST00000533413 NPM1P06748 294 aaKnown RBP eCLIP7.83□□□□□ -1.16
CKAP5-212ENST00000533413 GLI2P10070 1586 aa7.83□□□□□ -1.16
CKAP5-212ENST00000533413 PLB1Q6P1J6 1458 aa7.83□□□□□ -1.16
CKAP5-212ENST00000533413 HECW1Q76N89 1606 aa7.82□□□□□ -1.16
CKAP5-212ENST00000533413 DIP2BQ9P265 1576 aa7.82□□□□□ -1.16
CKAP5-212ENST00000533413 ZNF316A6NFI3 1004 aaPredicted RBP7.82□□□□□ -1.16
CKAP5-212ENST00000533413 TRHP20396 242 aaPredicted RBP7.82□□□□□ -1.16
CKAP5-212ENST00000533413 FMN1Q68DA7 1419 aa7.82□□□□□ -1.16
CKAP5-212ENST00000533413 CCDC136Q96JN2 1154 aa7.81□□□□□ -1.16
CKAP5-212ENST00000533413 POLR3GLQ9BT43 218 aa7.81□□□□□ -1.16
CKAP5-212ENST00000533413 ABCC10Q5T3U5 1492 aa7.81□□□□□ -1.16
CKAP5-212ENST00000533413 IRX6P78412 446 aaPredicted RBP7.8□□□□□ -1.16
CKAP5-212ENST00000533413 ARHGAP35Q9NRY4 1499 aa7.8□□□□□ -1.16
CKAP5-212ENST00000533413 CFAP43Q8NDM7 1665 aa7.79□□□□□ -1.16
CKAP5-212ENST00000533413 YTHDC1Q96MU7 727 aaKnown RBP7.79□□□□□ -1.16
CKAP5-212ENST00000533413 FHOD3Q2V2M9 1422 aa7.78□□□□□ -1.16
CKAP5-212ENST00000533413 MAP3K4Q9Y6R4 1608 aa7.78□□□□□ -1.16
CKAP5-212ENST00000533413 WDR7Q9Y4E6 1490 aa7.78□□□□□ -1.16
CKAP5-212ENST00000533413 ASXL2Q76L83 1435 aa7.77□□□□□ -1.17
CKAP5-212ENST00000533413 CCDC18Q5T9S5 1454 aa7.77□□□□□ -1.17
CKAP5-212ENST00000533413 CEP162Q5TB80 1403 aa7.76□□□□□ -1.17
CKAP5-212ENST00000533413 FYCO1Q9BQS8 1478 aa7.76□□□□□ -1.17
CKAP5-212ENST00000533413 HSP90B1P14625 803 aaKnown RBP7.76□□□□□ -1.17
CKAP5-212ENST00000533413 NUP153P49790 1475 aaKnown RBP7.76□□□□□ -1.17
CKAP5-212ENST00000533413 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.76□□□□□ -1.17
CKAP5-212ENST00000533413 CLIP1P30622 1438 aa7.76□□□□□ -1.17
CKAP5-212ENST00000533413 EPRSP07814 1512 aaKnown RBP7.75□□□□□ -1.17
CKAP5-212ENST00000533413 CASKIN1Q8WXD9 1431 aa7.75□□□□□ -1.17
CKAP5-212ENST00000533413 ABCA9Q8IUA7 1624 aa7.75□□□□□ -1.17
CKAP5-212ENST00000533413 ATP10BO94823 1461 aa7.75□□□□□ -1.17
CKAP5-212ENST00000533413 NECTIN2Q92692 538 aa7.74□□□□□ -1.17
CKAP5-212ENST00000533413 CLSPNQ9HAW4 1339 aa7.74□□□□□ -1.17
CKAP5-212ENST00000533413 PCF11O94913 1555 aaKnown RBP7.74□□□□□ -1.17
CKAP5-212ENST00000533413 CFAP74Q9C0B2 1584 aa7.74□□□□□ -1.17
CKAP5-212ENST00000533413 TEX14Q8IWB6 1497 aa7.74□□□□□ -1.17
CKAP5-212ENST00000533413 FGD1P98174 961 aa7.74□□□□□ -1.17
CKAP5-212ENST00000533413 CCDC9Q9Y3X0 531 aaKnown RBP7.74□□□□□ -1.17
CKAP5-212ENST00000533413 PPRC1Q5VV67 1664 aaKnown RBP7.73□□□□□ -1.17
CKAP5-212ENST00000533413 LRRIQ1Q96JM4 1722 aa7.73□□□□□ -1.17
CKAP5-212ENST00000533413 TSHZ2Q9NRE2 1034 aa7.72□□□□□ -1.17
CKAP5-212ENST00000533413 PAXIP1Q6ZW49 1069 aaPredicted RBP7.72□□□□□ -1.17
CKAP5-212ENST00000533413 ANO8Q9HCE9 1232 aaPredicted RBP7.72□□□□□ -1.17
CKAP5-212ENST00000533413 MAGI3Q5TCQ9 1506 aa7.72□□□□□ -1.17
CKAP5-212ENST00000533413 HNRNPUL2Q1KMD3 747 aaKnown RBP7.71□□□□□ -1.17
CKAP5-212ENST00000533413 P3H3Q8IVL6 736 aa7.71□□□□□ -1.17
CKAP5-212ENST00000533413 ZNF428Q96B54 188 aa7.71□□□□□ -1.17
CKAP5-212ENST00000533413 NBR1Q14596 966 aa7.71□□□□□ -1.18
CKAP5-212ENST00000533413 MIER1Q8N108 512 aa7.71□□□□□ -1.18
CKAP5-212ENST00000533413 KIF14Q15058 1648 aa7.71□□□□□ -1.18
CKAP5-212ENST00000533413 ARAP3Q8WWN8 1544 aa7.7□□□□□ -1.18
CKAP5-212ENST00000533413 TSPOAP1O95153 1857 aa7.7□□□□□ -1.18
CKAP5-212ENST00000533413 PHLDB1Q86UU1 1377 aa7.7□□□□□ -1.18
CKAP5-212ENST00000533413 A0A0U1RQG5 324 aaPredicted RBP7.7□□□□□ -1.18
CKAP5-212ENST00000533413 MYO5CQ9NQX4 1742 aa7.69□□□□□ -1.18
CKAP5-212ENST00000533413 FAM69CQ0P6D2 419 aa7.69□□□□□ -1.18
CKAP5-212ENST00000533413 MAP3K1Q13233 1512 aa7.68□□□□□ -1.18
CKAP5-212ENST00000533413 CDK13Q14004 1512 aaKnown RBP7.68□□□□□ -1.18
CKAP5-212ENST00000533413 KDM6BO15054 1643 aa7.68□□□□□ -1.18
CKAP5-212ENST00000533413 NEO1Q92859 1461 aa7.67□□□□□ -1.18
CKAP5-212ENST00000533413 TROQ12816 1431 aaPredicted RBP7.67□□□□□ -1.18
CKAP5-212ENST00000533413 PLEKHD1A6NEE1 506 aa7.67□□□□□ -1.18
CKAP5-212ENST00000533413 FOXD1Q16676 465 aa7.67□□□□□ -1.18
CKAP5-212ENST00000533413 EHBP1L1Q8N3D4 1523 aa7.66□□□□□ -1.18
CKAP5-212ENST00000533413 CD109Q6YHK3 1445 aa7.66□□□□□ -1.18
CKAP5-212ENST00000533413 VPS8Q8N3P4 1428 aa7.66□□□□□ -1.18
CKAP5-212ENST00000533413 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.66□□□□□ -1.18
CKAP5-212ENST00000533413 TTC37Q6PGP7 1564 aa7.66□□□□□ -1.18
CKAP5-212ENST00000533413 ITSN2Q9NZM3 1697 aa7.65□□□□□ -1.18
CKAP5-212ENST00000533413 PREX2Q70Z35 1606 aa7.65□□□□□ -1.18
CKAP5-212ENST00000533413 BRPF3Q9ULD4 1205 aa7.65□□□□□ -1.19
CKAP5-212ENST00000533413 TIAM1Q13009 1591 aa7.64□□□□□ -1.19
CKAP5-212ENST00000533413 HMGB1P09429 215 aaKnown RBP7.64□□□□□ -1.19
CKAP5-212ENST00000533413 PUS7Q96PZ0 661 aaKnown RBP7.64□□□□□ -1.19
CKAP5-212ENST00000533413 SUPT6HQ7KZ85 1726 aaKnown RBP7.64□□□□□ -1.19
CKAP5-212ENST00000533413 C1orf115Q9H7X2 142 aa7.63□□□□□ -1.19
CKAP5-212ENST00000533413 CDC42BPAQ5VT25 1732 aa7.62□□□□□ -1.19
CKAP5-212ENST00000533413 PLCH2O75038 1416 aa7.62□□□□□ -1.19
CKAP5-212ENST00000533413 CDC42BPBQ9Y5S2 1711 aa7.61□□□□□ -1.19
CKAP5-212ENST00000533413 RICTORQ6R327 1708 aa7.61□□□□□ -1.19
CKAP5-212ENST00000533413 ZMYM4Q5VZL5 1548 aa7.6□□□□□ -1.19
CKAP5-212ENST00000533413 FANCAO15360 1455 aa7.6□□□□□ -1.19
CKAP5-212ENST00000533413 ZBTB7CA1YPR0 619 aa7.6□□□□□ -1.19
CKAP5-212ENST00000533413 KCNH8Q96L42 1107 aa7.6□□□□□ -1.19
CKAP5-212ENST00000533413 ATP1B4Q9UN42 357 aaPredicted RBP7.59□□□□□ -1.19
CKAP5-212ENST00000533413 PLEKHH2Q8IVE3 1493 aa7.59□□□□□ -1.19
CKAP5-212ENST00000533413 ARHGAP5Q13017 1502 aa7.58□□□□□ -1.2
CKAP5-212ENST00000533413 ZFP91Q96JP5 570 aaPredicted RBP7.58□□□□□ -1.2
CKAP5-212ENST00000533413 MTUS2Q5JR59 1369 aa7.58□□□□□ -1.2
CKAP5-212ENST00000533413 AKNAQ7Z591 1439 aa7.58□□□□□ -1.2
CKAP5-212ENST00000533413 FRMPD1Q5SYB0 1578 aa7.58□□□□□ -1.2
CKAP5-212ENST00000533413 LRRC9Q6ZRR7 1453 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms