RNA–Protein interactions for RNA: ENST00000533361.1

SIPA1-208, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 4

Gene SIPA1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-208ENST00000533361 EHBP1L1Q8N3D4 1523 aa35.12■■■■□ 3.21
SIPA1-208ENST00000533361 CDC42BPBQ9Y5S2 1711 aa35.11■■■■□ 3.21
SIPA1-208ENST00000533361 CCNB3Q8WWL7 1395 aa35.11■■■■□ 3.21
SIPA1-208ENST00000533361 TIAM1Q13009 1591 aa35.1■■■■□ 3.21
SIPA1-208ENST00000533361 PREX2Q70Z35 1606 aa35.1■■■■□ 3.21
SIPA1-208ENST00000533361 APLP2Q06481 763 aa35.09■■■■□ 3.21
SIPA1-208ENST00000533361 ZNF777Q9ULD5 760 aaPredicted RBP35.09■■■■□ 3.21
SIPA1-208ENST00000533361 FRMPD1Q5SYB0 1578 aa35.08■■■■□ 3.21
SIPA1-208ENST00000533361 CDC42BPAQ5VT25 1732 aa35.07■■■■□ 3.2
SIPA1-208ENST00000533361 RICTORQ6R327 1708 aa35.05■■■■□ 3.2
SIPA1-208ENST00000533361 GPATCH8Q9UKJ3 1502 aaKnown RBP35.05■■■■□ 3.2
SIPA1-208ENST00000533361 CFDP1Q9UEE9 299 aaPredicted RBP35.03■■■■□ 3.2
SIPA1-208ENST00000533361 POGZQ7Z3K3 1410 aa35.01■■■■□ 3.2
SIPA1-208ENST00000533361 LRRC9Q6ZRR7 1453 aa34.97■■■■□ 3.19
SIPA1-208ENST00000533361 MAP3K1Q13233 1512 aa34.97■■■■□ 3.19
SIPA1-208ENST00000533361 MYT1LQ9UL68 1186 aa34.97■■■■□ 3.19
SIPA1-208ENST00000533361 SUPT6HQ7KZ85 1726 aaKnown RBP34.97■■■■□ 3.19
SIPA1-208ENST00000533361 KANK4Q5T7N3 995 aaPredicted RBP34.96■■■■□ 3.19
SIPA1-208ENST00000533361 AFAP1Q8N556 730 aa34.96■■■■□ 3.19
SIPA1-208ENST00000533361 NCOA2Q15596 1464 aa34.94■■■■□ 3.18
SIPA1-208ENST00000533361 ZMYM4Q5VZL5 1548 aa34.92■■■■□ 3.18
SIPA1-208ENST00000533361 ZNF518AQ6AHZ1 1483 aa34.92■■■■□ 3.18
SIPA1-208ENST00000533361 ABCC1P33527 1531 aa34.91■■■■□ 3.18
SIPA1-208ENST00000533361 ARID4BQ4LE39 1312 aaPredicted RBP34.9■■■■□ 3.18
SIPA1-208ENST00000533361 ZFYVE16Q7Z3T8 1539 aa34.89■■■■□ 3.18
SIPA1-208ENST00000533361 MAGI2Q86UL8 1455 aa34.89■■■■□ 3.18
SIPA1-208ENST00000533361 ARHGEF12Q9NZN5 1544 aa34.88■■■■□ 3.17
SIPA1-208ENST00000533361 ITSN2Q9NZM3 1697 aa34.88■■■■□ 3.17
SIPA1-208ENST00000533361 SAMD9LQ8IVG5 1584 aa34.87■■■■□ 3.17
SIPA1-208ENST00000533361 HNRNPMP52272 730 aaKnown RBP eCLIP34.87■■■■□ 3.17
SIPA1-208ENST00000533361 YEATS2Q9ULM3 1422 aa34.87■■■■□ 3.17
SIPA1-208ENST00000533361 ARHGEF40Q8TER5 1519 aa34.86■■■■□ 3.17
SIPA1-208ENST00000533361 TRAPPC8Q9Y2L5 1435 aa34.86■■■■□ 3.17
SIPA1-208ENST00000533361 ILDR1Q86SU0 546 aaPredicted RBP34.85■■■■□ 3.17
SIPA1-208ENST00000533361 PLEKHH2Q8IVE3 1493 aa34.83■■■■□ 3.17
SIPA1-208ENST00000533361 ZNF644Q9H582 1327 aaPredicted RBP34.81■■■■□ 3.16
SIPA1-208ENST00000533361 SYCP2Q9BX26 1530 aa34.81■■■■□ 3.16
SIPA1-208ENST00000533361 KDM5CP41229 1560 aa34.79■■■■□ 3.16
SIPA1-208ENST00000533361 KIAA1107Q9UPP5 1409 aa34.78■■■■□ 3.16
SIPA1-208ENST00000533361 HECW2Q9P2P5 1572 aa34.75■■■■□ 3.15
SIPA1-208ENST00000533361 ATP10AO60312 1499 aa34.75■■■■□ 3.15
SIPA1-208ENST00000533361 MLH3Q9UHC1 1453 aa34.72■■■■□ 3.15
SIPA1-208ENST00000533361 SPAG9O60271 1321 aaKnown RBP34.72■■■■□ 3.15
SIPA1-208ENST00000533361 C9orf84Q5VXU9 1444 aa34.69■■■■□ 3.14
SIPA1-208ENST00000533361 CAMSAP2Q08AD1 1489 aa34.67■■■■□ 3.14
SIPA1-208ENST00000533361 MLECQ14165 292 aa34.66■■■■□ 3.14
SIPA1-208ENST00000533361 MYOM3Q5VTT5 1437 aa34.65■■■■□ 3.14
SIPA1-208ENST00000533361 DIP2CQ9Y2E4 1556 aa34.63■■■■□ 3.13
SIPA1-208ENST00000533361 BCORL1Q5H9F3 1711 aa34.62■■■■□ 3.13
SIPA1-208ENST00000533361 MBD5Q9P267 1494 aa34.62■■■■□ 3.13
SIPA1-208ENST00000533361 ABCA6Q8N139 1617 aa34.61■■■■□ 3.13
SIPA1-208ENST00000533361 KIDINS220Q9ULH0 1771 aa34.61■■■■□ 3.13
SIPA1-208ENST00000533361 SIGLEC1Q9BZZ2 1709 aa34.59■■■■□ 3.13
SIPA1-208ENST00000533361 RSPH4AQ5TD94 716 aa34.59■■■■□ 3.13
SIPA1-208ENST00000533361 MIA2Q96PC5 1412 aa34.58■■■■□ 3.13
SIPA1-208ENST00000533361 ADAMTSL3P82987 1691 aa34.57■■■■□ 3.13
SIPA1-208ENST00000533361 ATP7AQ04656 1500 aa34.56■■■■□ 3.12
SIPA1-208ENST00000533361 CCDC141Q6ZP82 1450 aa34.54■■■■□ 3.12
SIPA1-208ENST00000533361 TSPY4P0CV99 314 aa34.52■■■■□ 3.12
SIPA1-208ENST00000533361 TSPY10P0CW01 314 aa34.52■■■■□ 3.12
SIPA1-208ENST00000533361 INO80Q9ULG1 1556 aaPredicted RBP34.51■■■■□ 3.12
SIPA1-208ENST00000533361 MADDQ8WXG6 1647 aa34.51■■■■□ 3.11
SIPA1-208ENST00000533361 REREQ9P2R6 1566 aa34.49■■■■□ 3.11
SIPA1-208ENST00000533361 PPARGC1BQ86YN6 1023 aaKnown RBP34.47■■■■□ 3.11
SIPA1-208ENST00000533361 ARHGEF5Q12774 1597 aa34.47■■■■□ 3.11
SIPA1-208ENST00000533361 RTEL1-TNFRSF6BF6WH68 1400 aa34.47■■■■□ 3.11
SIPA1-208ENST00000533361 PTPRMP28827 1452 aa34.45■■■■□ 3.1
SIPA1-208ENST00000533361 PLPPR3Q6T4P5 718 aa34.44■■■■□ 3.1
SIPA1-208ENST00000533361 FGD6Q6ZV73 1430 aa34.44■■■■□ 3.1
SIPA1-208ENST00000533361 PTPN23Q9H3S7 1636 aa34.43■■■■□ 3.1
SIPA1-208ENST00000533361 RIMS1Q86UR5 1692 aaKnown RBP34.43■■■■□ 3.1
SIPA1-208ENST00000533361 AGLP35573 1532 aa34.42■■■■□ 3.1
SIPA1-208ENST00000533361 A2MP01023 1474 aa34.42■■■■□ 3.1
SIPA1-208ENST00000533361 ESF1Q9H501 851 aaKnown RBP34.39■■■■□ 3.1
SIPA1-208ENST00000533361 FER1L4A9Z1Z3 1794 aa34.37■■■■□ 3.09
SIPA1-208ENST00000533361 ADGBQ8N7X0 1667 aa34.37■■■■□ 3.09
SIPA1-208ENST00000533361 FAM50AQ14320 339 aaKnown RBP34.35■■■■□ 3.09
SIPA1-208ENST00000533361 TCOF1Q13428 1488 aaKnown RBP34.33■■■■□ 3.09
SIPA1-208ENST00000533361 DHX29Q7Z478 1369 aaKnown RBP34.32■■■■□ 3.08
SIPA1-208ENST00000533361 GGT6Q6P531 493 aa34.3■■■■□ 3.08
SIPA1-208ENST00000533361 PLXNC1O60486 1568 aa34.29■■■■□ 3.08
SIPA1-208ENST00000533361 MAST1Q9Y2H9 1570 aa34.28■■■■□ 3.08
SIPA1-208ENST00000533361 ABCC5O15440 1437 aa34.27■■■■□ 3.08
SIPA1-208ENST00000533361 DAPK1P53355 1430 aa34.24■■■■□ 3.07
SIPA1-208ENST00000533361 KIF3BO15066 747 aa34.24■■■■□ 3.07
SIPA1-208ENST00000533361 CEBPAP49715 358 aaPredicted RBP34.24■■■■□ 3.07
SIPA1-208ENST00000533361 CHIC2Q9UKJ5 165 aa34.22■■■■□ 3.07
SIPA1-208ENST00000533361 DNMT1P26358 1616 aaKnown RBP34.22■■■■□ 3.07
SIPA1-208ENST00000533361 SHANK2Q9UPX8 1470 aa34.19■■■■□ 3.06
SIPA1-208ENST00000533361 CROCC2H7BZ55 1655 aa34.18■■■■□ 3.06
SIPA1-208ENST00000533361 RRP7BPQ9NSQ0 103 aa34.17■■■■□ 3.06
SIPA1-208ENST00000533361 CNTLNQ9NXG0 1405 aa34.17■■■■□ 3.06
SIPA1-208ENST00000533361 PPP6R1Q9UPN7 881 aa34.13■■■■□ 3.05
SIPA1-208ENST00000533361 KIF15Q9NS87 1388 aa34.11■■■■□ 3.05
SIPA1-208ENST00000533361 ANKRD30AQ9BXX3 1397 aa34.11■■■■□ 3.05
SIPA1-208ENST00000533361 DUOX2Q9NRD8 1548 aa34.09■■■■□ 3.05
SIPA1-208ENST00000533361 CLTCQ00610 1675 aaKnown RBP34.07■■■■□ 3.04
SIPA1-208ENST00000533361 FBXO41Q8TF61 875 aa34.07■■■■□ 3.04
SIPA1-208ENST00000533361 ZMYM3Q14202 1370 aa34.07■■■■□ 3.04
SIPA1-208ENST00000533361 C3P01024 1663 aa34.06■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms