RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 PREX2Q70Z35 1606 aa27.96■■■□□ 2.07
SMPD1-208ENST00000533123 PLCH2O75038 1416 aa27.95■■■□□ 2.07
SMPD1-208ENST00000533123 ITGAEP38570 1179 aa27.95■■■□□ 2.06
SMPD1-208ENST00000533123 FAM69CQ0P6D2 419 aa27.94■■■□□ 2.06
SMPD1-208ENST00000533123 ARHGAP5Q13017 1502 aa27.93■■■□□ 2.06
SMPD1-208ENST00000533123 TCOF1Q13428 1488 aaKnown RBP27.92■■■□□ 2.06
SMPD1-208ENST00000533123 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.91■■■□□ 2.06
SMPD1-208ENST00000533123 DIP2BQ9P265 1576 aa27.91■■■□□ 2.06
SMPD1-208ENST00000533123 CD109Q6YHK3 1445 aa27.91■■■□□ 2.06
SMPD1-208ENST00000533123 CAMSAP2Q08AD1 1489 aa27.89■■■□□ 2.06
SMPD1-208ENST00000533123 EFCAB2Q5VUJ9 269 aa27.87■■■□□ 2.05
SMPD1-208ENST00000533123 GLI2P10070 1586 aa27.87■■■□□ 2.05
SMPD1-208ENST00000533123 SAMD9LQ8IVG5 1584 aa27.84■■■□□ 2.05
SMPD1-208ENST00000533123 ARAP3Q8WWN8 1544 aa27.84■■■□□ 2.05
SMPD1-208ENST00000533123 FANCAO15360 1455 aa27.82■■■□□ 2.04
SMPD1-208ENST00000533123 MAP3K4Q9Y6R4 1608 aa27.82■■■□□ 2.04
SMPD1-208ENST00000533123 HNRNPMP52272 730 aaKnown RBP eCLIP27.8■■■□□ 2.04
SMPD1-208ENST00000533123 KIF13AQ9H1H9 1805 aa27.79■■■□□ 2.04
SMPD1-208ENST00000533123 PTPRKQ15262 1439 aa27.77■■■□□ 2.04
SMPD1-208ENST00000533123 SYCP2Q9BX26 1530 aa27.74■■■□□ 2.03
SMPD1-208ENST00000533123 ABCC5O15440 1437 aa27.74■■■□□ 2.03
SMPD1-208ENST00000533123 DAPK1P53355 1430 aa27.74■■■□□ 2.03
SMPD1-208ENST00000533123 MBD5Q9P267 1494 aa27.74■■■□□ 2.03
SMPD1-208ENST00000533123 TSPOAP1O95153 1857 aa27.73■■■□□ 2.03
SMPD1-208ENST00000533123 DNMT1P26358 1616 aaKnown RBP27.73■■■□□ 2.03
SMPD1-208ENST00000533123 CHIC2Q9UKJ5 165 aa27.73■■■□□ 2.03
SMPD1-208ENST00000533123 ARHGEF12Q9NZN5 1544 aa27.73■■■□□ 2.03
SMPD1-208ENST00000533123 PLEKHH2Q8IVE3 1493 aa27.72■■■□□ 2.03
SMPD1-208ENST00000533123 KIAA1107Q9UPP5 1409 aa27.72■■■□□ 2.03
SMPD1-208ENST00000533123 AKNAQ7Z591 1439 aa27.72■■■□□ 2.03
SMPD1-208ENST00000533123 TRHP20396 242 aaPredicted RBP27.71■■■□□ 2.03
SMPD1-208ENST00000533123 ABCC1P33527 1531 aa27.71■■■□□ 2.03
SMPD1-208ENST00000533123 ADGRL1O94910 1474 aa27.69■■■□□ 2.02
SMPD1-208ENST00000533123 ARHGEF5Q12774 1597 aa27.67■■■□□ 2.02
SMPD1-208ENST00000533123 RSPH4AQ5TD94 716 aa27.67■■■□□ 2.02
SMPD1-208ENST00000533123 SCAPERQ9BY12 1400 aa27.67■■■□□ 2.02
SMPD1-208ENST00000533123 CFAP74Q9C0B2 1584 aa27.66■■■□□ 2.02
SMPD1-208ENST00000533123 CCDC141Q6ZP82 1450 aa27.65■■■□□ 2.02
SMPD1-208ENST00000533123 NEO1Q92859 1461 aa27.65■■■□□ 2.02
SMPD1-208ENST00000533123 PPRC1Q5VV67 1664 aaKnown RBP27.65■■■□□ 2.02
SMPD1-208ENST00000533123 CCER1Q8TC90 406 aaPredicted RBP27.65■■■□□ 2.02
SMPD1-208ENST00000533123 TRAPPC8Q9Y2L5 1435 aa27.65■■■□□ 2.02
SMPD1-208ENST00000533123 TSPY4P0CV99 314 aa27.64■■■□□ 2.02
SMPD1-208ENST00000533123 TSPY10P0CW01 314 aa27.64■■■□□ 2.02
SMPD1-208ENST00000533123 AFAP1Q8N556 730 aa27.63■■■□□ 2.01
SMPD1-208ENST00000533123 CROCC2H7BZ55 1655 aa27.62■■■□□ 2.01
SMPD1-208ENST00000533123 RRP7BPQ9NSQ0 103 aa27.61■■■□□ 2.01
SMPD1-208ENST00000533123 TEX14Q8IWB6 1497 aa27.61■■■□□ 2.01
SMPD1-208ENST00000533123 C9orf84Q5VXU9 1444 aa27.59■■■□□ 2.01
SMPD1-208ENST00000533123 ZEB1P37275 1124 aaPredicted RBP27.59■■■□□ 2.01
SMPD1-208ENST00000533123 SHANK2Q9UPX8 1470 aa27.57■■■□□ 2
SMPD1-208ENST00000533123 ROCK1Q13464 1354 aa27.54■■■□□ 2
SMPD1-208ENST00000533123 RAPGEF3O95398 923 aa27.54■■■□□ 2
SMPD1-208ENST00000533123 NCOA1Q15788 1441 aa27.53■■■□□ 2
SMPD1-208ENST00000533123 HFM1A2PYH4 1435 aa27.53■■■□□ 2
SMPD1-208ENST00000533123 SETD5Q9C0A6 1442 aa27.52■■■□□ 2
SMPD1-208ENST00000533123 NAIPQ13075 1403 aa27.52■■■□□ 2
SMPD1-208ENST00000533123 DENND4BO75064 1496 aaPredicted RBP27.52■■■□□ 2
SMPD1-208ENST00000533123 SPAG9O60271 1321 aaKnown RBP27.52■■■□□ 2
SMPD1-208ENST00000533123 ANKRD30AQ9BXX3 1397 aa27.51■■■□□ 2
SMPD1-208ENST00000533123 POGZQ7Z3K3 1410 aa27.51■■□□□ 1.99
SMPD1-208ENST00000533123 ADGRL2O95490 1459 aa27.51■■□□□ 1.99
SMPD1-208ENST00000533123 ZNF518AQ6AHZ1 1483 aa27.51■■□□□ 1.99
SMPD1-208ENST00000533123 ADGBQ8N7X0 1667 aa27.51■■□□□ 1.99
SMPD1-208ENST00000533123 RAB3GAP2Q9H2M9 1393 aa27.49■■□□□ 1.99
SMPD1-208ENST00000533123 MAST1Q9Y2H9 1570 aa27.49■■□□□ 1.99
SMPD1-208ENST00000533123 MYT1LQ9UL68 1186 aa27.48■■□□□ 1.99
SMPD1-208ENST00000533123 KIF15Q9NS87 1388 aa27.43■■□□□ 1.98
SMPD1-208ENST00000533123 RTEL1-TNFRSF6BF6WH68 1400 aa27.43■■□□□ 1.98
SMPD1-208ENST00000533123 KDM5CP41229 1560 aa27.43■■□□□ 1.98
SMPD1-208ENST00000533123 RICTORQ6R327 1708 aa27.43■■□□□ 1.98
SMPD1-208ENST00000533123 ZFYVE16Q7Z3T8 1539 aa27.43■■□□□ 1.98
SMPD1-208ENST00000533123 GCC2Q8IWJ2 1684 aa27.42■■□□□ 1.98
SMPD1-208ENST00000533123 COL17A1Q9UMD9 1497 aaPredicted RBP27.42■■□□□ 1.98
SMPD1-208ENST00000533123 ATP7AQ04656 1500 aa27.41■■□□□ 1.98
SMPD1-208ENST00000533123 INO80Q9ULG1 1556 aaPredicted RBP27.4■■□□□ 1.98
SMPD1-208ENST00000533123 KDM6BO15054 1643 aa27.39■■□□□ 1.98
SMPD1-208ENST00000533123 FRMPD1Q5SYB0 1578 aa27.39■■□□□ 1.97
SMPD1-208ENST00000533123 PLXNC1O60486 1568 aa27.38■■□□□ 1.97
SMPD1-208ENST00000533123 KIDINS220Q9ULH0 1771 aa27.37■■□□□ 1.97
SMPD1-208ENST00000533123 MLH3Q9UHC1 1453 aa27.37■■□□□ 1.97
SMPD1-208ENST00000533123 ANKRD50Q9ULJ7 1429 aa27.36■■□□□ 1.97
SMPD1-208ENST00000533123 HECW2Q9P2P5 1572 aa27.36■■□□□ 1.97
SMPD1-208ENST00000533123 DUOX2Q9NRD8 1548 aa27.3■■□□□ 1.96
SMPD1-208ENST00000533123 ZMYM4Q5VZL5 1548 aa27.29■■□□□ 1.96
SMPD1-208ENST00000533123 YEATS2Q9ULM3 1422 aa27.28■■□□□ 1.96
SMPD1-208ENST00000533123 TRIM52Q96A61 297 aa27.26■■□□□ 1.96
SMPD1-208ENST00000533123 DHX57Q6P158 1386 aaKnown RBP27.26■■□□□ 1.96
SMPD1-208ENST00000533123 ABCA6Q8N139 1617 aa27.26■■□□□ 1.95
SMPD1-208ENST00000533123 DHX29Q7Z478 1369 aaKnown RBP27.24■■□□□ 1.95
SMPD1-208ENST00000533123 ERBINQ96RT1 1412 aa27.24■■□□□ 1.95
SMPD1-208ENST00000533123 MAGI2Q86UL8 1455 aa27.23■■□□□ 1.95
SMPD1-208ENST00000533123 DIP2CQ9Y2E4 1556 aa27.22■■□□□ 1.95
SMPD1-208ENST00000533123 A2MP01023 1474 aa27.22■■□□□ 1.95
SMPD1-208ENST00000533123 KIF3BO15066 747 aa27.17■■□□□ 1.94
SMPD1-208ENST00000533123 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.15■■□□□ 1.94
SMPD1-208ENST00000533123 NUP155O75694 1391 aa27.14■■□□□ 1.94
SMPD1-208ENST00000533123 ACIN1Q9UKV3 1341 aaKnown RBP27.14■■□□□ 1.94
SMPD1-208ENST00000533123 ATP10AO60312 1499 aa27.14■■□□□ 1.94
SMPD1-208ENST00000533123 MPHOSPH9Q99550 1183 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms