RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 RIMS1Q86UR5 1692 aaKnown RBP28.13■■■□□ 2.09
RPUSD4-207ENST00000532800 POGZQ7Z3K3 1410 aa28.13■■■□□ 2.09
RPUSD4-207ENST00000532800 SCAPERQ9BY12 1400 aa28.13■■■□□ 2.09
RPUSD4-207ENST00000532800 TROQ12816 1431 aaPredicted RBP28.1■■■□□ 2.09
RPUSD4-207ENST00000532800 CDK11AQ9UQ88 783 aaPredicted RBP28.1■■■□□ 2.09
RPUSD4-207ENST00000532800 MAGI2Q86UL8 1455 aa28.09■■■□□ 2.09
RPUSD4-207ENST00000532800 PCF11O94913 1555 aaKnown RBP28.08■■■□□ 2.09
RPUSD4-207ENST00000532800 CLIP1P30622 1438 aa28.04■■■□□ 2.08
RPUSD4-207ENST00000532800 EFCAB2Q5VUJ9 269 aa28.04■■■□□ 2.08
RPUSD4-207ENST00000532800 ARHGAP5Q13017 1502 aa28.03■■■□□ 2.08
RPUSD4-207ENST00000532800 CASKIN1Q8WXD9 1431 aa28.01■■■□□ 2.07
RPUSD4-207ENST00000532800 LMTK3Q96Q04 1460 aa28■■■□□ 2.07
RPUSD4-207ENST00000532800 CDC42BPBQ9Y5S2 1711 aa27.98■■■□□ 2.07
RPUSD4-207ENST00000532800 CCDC18Q5T9S5 1454 aa27.97■■■□□ 2.07
RPUSD4-207ENST00000532800 FER1L4A9Z1Z3 1794 aa27.97■■■□□ 2.07
RPUSD4-207ENST00000532800 MLECQ14165 292 aa27.97■■■□□ 2.07
RPUSD4-207ENST00000532800 ATP10AO60312 1499 aa27.95■■■□□ 2.07
RPUSD4-207ENST00000532800 ZNF518AQ6AHZ1 1483 aa27.95■■■□□ 2.07
RPUSD4-207ENST00000532800 C9orf84Q5VXU9 1444 aa27.95■■■□□ 2.07
RPUSD4-207ENST00000532800 PLPPR3Q6T4P5 718 aa27.95■■■□□ 2.06
RPUSD4-207ENST00000532800 KDM5CP41229 1560 aa27.94■■■□□ 2.06
RPUSD4-207ENST00000532800 PREX2Q70Z35 1606 aa27.94■■■□□ 2.06
RPUSD4-207ENST00000532800 AFAP1Q8N556 730 aa27.91■■■□□ 2.06
RPUSD4-207ENST00000532800 FYCO1Q9BQS8 1478 aa27.9■■■□□ 2.06
RPUSD4-207ENST00000532800 ARHGEF12Q9NZN5 1544 aa27.9■■■□□ 2.06
RPUSD4-207ENST00000532800 ABCC1P33527 1531 aa27.87■■■□□ 2.05
RPUSD4-207ENST00000532800 DIP2CQ9Y2E4 1556 aa27.87■■■□□ 2.05
RPUSD4-207ENST00000532800 CDC42BPAQ5VT25 1732 aa27.87■■■□□ 2.05
RPUSD4-207ENST00000532800 ITSN2Q9NZM3 1697 aa27.85■■■□□ 2.05
RPUSD4-207ENST00000532800 ABCA6Q8N139 1617 aa27.85■■■□□ 2.05
RPUSD4-207ENST00000532800 HSPA2P54652 639 aa27.83■■■□□ 2.05
RPUSD4-207ENST00000532800 TRAPPC8Q9Y2L5 1435 aa27.83■■■□□ 2.05
RPUSD4-207ENST00000532800 MYT1LQ9UL68 1186 aa27.81■■■□□ 2.04
RPUSD4-207ENST00000532800 MLH3Q9UHC1 1453 aa27.8■■■□□ 2.04
RPUSD4-207ENST00000532800 REREQ9P2R6 1566 aa27.79■■■□□ 2.04
RPUSD4-207ENST00000532800 SAMD9LQ8IVG5 1584 aa27.74■■■□□ 2.03
RPUSD4-207ENST00000532800 KIDINS220Q9ULH0 1771 aa27.74■■■□□ 2.03
RPUSD4-207ENST00000532800 CEBPAP49715 358 aaPredicted RBP27.74■■■□□ 2.03
RPUSD4-207ENST00000532800 PREX1Q8TCU6 1659 aa27.72■■■□□ 2.03
RPUSD4-207ENST00000532800 GPATCH8Q9UKJ3 1502 aaKnown RBP27.72■■■□□ 2.03
RPUSD4-207ENST00000532800 FBXO41Q8TF61 875 aa27.7■■■□□ 2.02
RPUSD4-207ENST00000532800 SYCP2Q9BX26 1530 aa27.7■■■□□ 2.02
RPUSD4-207ENST00000532800 AGLP35573 1532 aa27.69■■■□□ 2.02
RPUSD4-207ENST00000532800 ZNF777Q9ULD5 760 aaPredicted RBP27.69■■■□□ 2.02
RPUSD4-207ENST00000532800 C3P01024 1663 aa27.65■■■□□ 2.02
RPUSD4-207ENST00000532800 MTUS2Q5JR59 1369 aa27.61■■■□□ 2.01
RPUSD4-207ENST00000532800 HNRNPMP52272 730 aaKnown RBP eCLIP27.6■■■□□ 2.01
RPUSD4-207ENST00000532800 CCNB3Q8WWL7 1395 aa27.6■■■□□ 2.01
RPUSD4-207ENST00000532800 UHRF1BP1Q6BDS2 1440 aa27.58■■■□□ 2
RPUSD4-207ENST00000532800 SETD1BQ9UPS6 1966 aaKnown RBP27.57■■■□□ 2
RPUSD4-207ENST00000532800 CFDP1Q9UEE9 299 aaPredicted RBP27.57■■■□□ 2
RPUSD4-207ENST00000532800 SPAG9O60271 1321 aaKnown RBP27.57■■■□□ 2
RPUSD4-207ENST00000532800 CEP162Q5TB80 1403 aa27.57■■■□□ 2
RPUSD4-207ENST00000532800 ATP7AQ04656 1500 aa27.57■■■□□ 2
RPUSD4-207ENST00000532800 TIAM1Q13009 1591 aa27.56■■■□□ 2
RPUSD4-207ENST00000532800 INO80Q9ULG1 1556 aaPredicted RBP27.56■■■□□ 2
RPUSD4-207ENST00000532800 KIAA1107Q9UPP5 1409 aa27.56■■■□□ 2
RPUSD4-207ENST00000532800 PLEKHH2Q8IVE3 1493 aa27.55■■■□□ 2
RPUSD4-207ENST00000532800 EHBP1L1Q8N3D4 1523 aa27.55■■■□□ 2
RPUSD4-207ENST00000532800 SUPT6HQ7KZ85 1726 aaKnown RBP27.55■■■□□ 2
RPUSD4-207ENST00000532800 STRCQ7RTU9 1775 aa27.55■■■□□ 2
RPUSD4-207ENST00000532800 ESF1Q9H501 851 aaKnown RBP27.53■■■□□ 2
RPUSD4-207ENST00000532800 CNTLNQ9NXG0 1405 aa27.5■■□□□ 1.99
RPUSD4-207ENST00000532800 PLXNC1O60486 1568 aa27.5■■□□□ 1.99
RPUSD4-207ENST00000532800 ZNF644Q9H582 1327 aaPredicted RBP27.48■■□□□ 1.99
RPUSD4-207ENST00000532800 MROH2AA6NES4 1674 aa27.48■■□□□ 1.99
RPUSD4-207ENST00000532800 A2MP01023 1474 aa27.46■■□□□ 1.99
RPUSD4-207ENST00000532800 CERKQ8TCT0 537 aa27.45■■□□□ 1.98
RPUSD4-207ENST00000532800 MBD5Q9P267 1494 aa27.43■■□□□ 1.98
RPUSD4-207ENST00000532800 CLTCQ00610 1675 aaKnown RBP27.43■■□□□ 1.98
RPUSD4-207ENST00000532800 ADGBQ8N7X0 1667 aa27.42■■□□□ 1.98
RPUSD4-207ENST00000532800 ZMYM3Q14202 1370 aa27.39■■□□□ 1.98
RPUSD4-207ENST00000532800 NCOA2Q15596 1464 aa27.38■■□□□ 1.97
RPUSD4-207ENST00000532800 NPATQ14207 1427 aa27.37■■□□□ 1.97
RPUSD4-207ENST00000532800 DMRT2Q9Y5R5 561 aa27.37■■□□□ 1.97
RPUSD4-207ENST00000532800 GGT6Q6P531 493 aa27.34■■□□□ 1.97
RPUSD4-207ENST00000532800 PTPRTO14522 1441 aa27.33■■□□□ 1.97
RPUSD4-207ENST00000532800 NCOA1Q15788 1441 aa27.33■■□□□ 1.97
RPUSD4-207ENST00000532800 CAMSAP2Q08AD1 1489 aa27.33■■□□□ 1.97
RPUSD4-207ENST00000532800 RTEL1-TNFRSF6BF6WH68 1400 aa27.32■■□□□ 1.96
RPUSD4-207ENST00000532800 MYO3AQ8NEV4 1616 aa27.31■■□□□ 1.96
RPUSD4-207ENST00000532800 CAMSAP1Q5T5Y3 1602 aa27.3■■□□□ 1.96
RPUSD4-207ENST00000532800 LOC105371045A0A1W2PR82 267 aa27.3■■□□□ 1.96
RPUSD4-207ENST00000532800 CCDC141Q6ZP82 1450 aa27.3■■□□□ 1.96
RPUSD4-207ENST00000532800 ZNF142P52746 1687 aaPredicted RBP27.28■■□□□ 1.96
RPUSD4-207ENST00000532800 PTPRKQ15262 1439 aa27.28■■□□□ 1.96
RPUSD4-207ENST00000532800 VPS8Q8N3P4 1428 aa27.27■■□□□ 1.96
RPUSD4-207ENST00000532800 DHX29Q7Z478 1369 aaKnown RBP27.25■■□□□ 1.95
RPUSD4-207ENST00000532800 CEP170BQ9Y4F5 1589 aaPredicted RBP27.23■■□□□ 1.95
RPUSD4-207ENST00000532800 LRRC9Q6ZRR7 1453 aa27.23■■□□□ 1.95
RPUSD4-207ENST00000532800 LTBP4Q8N2S1 1624 aa27.22■■□□□ 1.95
RPUSD4-207ENST00000532800 PPP6R1Q9UPN7 881 aa27.21■■□□□ 1.95
RPUSD4-207ENST00000532800 ARHGEF5Q12774 1597 aa27.21■■□□□ 1.95
RPUSD4-207ENST00000532800 NCKAP5LQ9HCH0 1330 aa27.17■■□□□ 1.94
RPUSD4-207ENST00000532800 KIF3BO15066 747 aa27.17■■□□□ 1.94
RPUSD4-207ENST00000532800 PLA2R1Q13018 1463 aa27.16■■□□□ 1.94
RPUSD4-207ENST00000532800 RSPH4AQ5TD94 716 aa27.15■■□□□ 1.94
RPUSD4-207ENST00000532800 KDM5DQ9BY66 1539 aa27.15■■□□□ 1.94
RPUSD4-207ENST00000532800 KANK4Q5T7N3 995 aaPredicted RBP27.13■■□□□ 1.93
RPUSD4-207ENST00000532800 TCOF1Q13428 1488 aaKnown RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms