RNA–Protein interactions for RNA: ENST00000532699.1

SDHD-213, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3

Gene SDHD, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-213ENST00000532699 RIMS1Q86UR5 1692 aaKnown RBP20.65■□□□□ 0.9
SDHD-213ENST00000532699 ZFYVE16Q7Z3T8 1539 aa20.64■□□□□ 0.9
SDHD-213ENST00000532699 POGZQ7Z3K3 1410 aa20.64■□□□□ 0.89
SDHD-213ENST00000532699 CASKIN1Q8WXD9 1431 aa20.64■□□□□ 0.89
SDHD-213ENST00000532699 CDC42BPAQ5VT25 1732 aa20.64■□□□□ 0.89
SDHD-213ENST00000532699 SCAPERQ9BY12 1400 aa20.62■□□□□ 0.89
SDHD-213ENST00000532699 PREX2Q70Z35 1606 aa20.61■□□□□ 0.89
SDHD-213ENST00000532699 MAGI2Q86UL8 1455 aa20.58■□□□□ 0.89
SDHD-213ENST00000532699 KDM5CP41229 1560 aa20.58■□□□□ 0.88
SDHD-213ENST00000532699 ARHGAP5Q13017 1502 aa20.57■□□□□ 0.88
SDHD-213ENST00000532699 FER1L4A9Z1Z3 1794 aa20.57■□□□□ 0.88
SDHD-213ENST00000532699 CCDC18Q5T9S5 1454 aa20.56■□□□□ 0.88
SDHD-213ENST00000532699 FYCO1Q9BQS8 1478 aa20.56■□□□□ 0.88
SDHD-213ENST00000532699 ITSN2Q9NZM3 1697 aa20.56■□□□□ 0.88
SDHD-213ENST00000532699 ARHGEF12Q9NZN5 1544 aa20.55■□□□□ 0.88
SDHD-213ENST00000532699 CLIP1P30622 1438 aa20.54■□□□□ 0.88
SDHD-213ENST00000532699 CDK11AQ9UQ88 783 aaPredicted RBP20.54■□□□□ 0.88
SDHD-213ENST00000532699 ARID4BQ4LE39 1312 aaPredicted RBP20.53■□□□□ 0.88
SDHD-213ENST00000532699 EFCAB2Q5VUJ9 269 aa20.53■□□□□ 0.88
SDHD-213ENST00000532699 ABCA6Q8N139 1617 aa20.52■□□□□ 0.88
SDHD-213ENST00000532699 ABCC1P33527 1531 aa20.52■□□□□ 0.87
SDHD-213ENST00000532699 DIP2CQ9Y2E4 1556 aa20.51■□□□□ 0.87
SDHD-213ENST00000532699 ATP10AO60312 1499 aa20.5■□□□□ 0.87
SDHD-213ENST00000532699 LMTK3Q96Q04 1460 aa20.5■□□□□ 0.87
SDHD-213ENST00000532699 ZNF518AQ6AHZ1 1483 aa20.49■□□□□ 0.87
SDHD-213ENST00000532699 KIDINS220Q9ULH0 1771 aa20.49■□□□□ 0.87
SDHD-213ENST00000532699 AFAP1Q8N556 730 aa20.48■□□□□ 0.87
SDHD-213ENST00000532699 SAMD9LQ8IVG5 1584 aa20.47■□□□□ 0.87
SDHD-213ENST00000532699 TRAPPC8Q9Y2L5 1435 aa20.47■□□□□ 0.87
SDHD-213ENST00000532699 C9orf84Q5VXU9 1444 aa20.46■□□□□ 0.87
SDHD-213ENST00000532699 REREQ9P2R6 1566 aa20.44■□□□□ 0.86
SDHD-213ENST00000532699 ILDR1Q86SU0 546 aaPredicted RBP20.43■□□□□ 0.86
SDHD-213ENST00000532699 MLH3Q9UHC1 1453 aa20.43■□□□□ 0.86
SDHD-213ENST00000532699 GPATCH8Q9UKJ3 1502 aaKnown RBP20.43■□□□□ 0.86
SDHD-213ENST00000532699 MLECQ14165 292 aa20.41■□□□□ 0.86
SDHD-213ENST00000532699 SYCP2Q9BX26 1530 aa20.38■□□□□ 0.85
SDHD-213ENST00000532699 CEP162Q5TB80 1403 aa20.37■□□□□ 0.85
SDHD-213ENST00000532699 TIAM1Q13009 1591 aa20.36■□□□□ 0.85
SDHD-213ENST00000532699 C3P01024 1663 aa20.35■□□□□ 0.85
SDHD-213ENST00000532699 PREX1Q8TCU6 1659 aa20.35■□□□□ 0.85
SDHD-213ENST00000532699 SETD1BQ9UPS6 1966 aaKnown RBP20.34■□□□□ 0.85
SDHD-213ENST00000532699 AGLP35573 1532 aa20.34■□□□□ 0.85
SDHD-213ENST00000532699 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
SDHD-213ENST00000532699 HSPA2P54652 639 aa20.32■□□□□ 0.84
SDHD-213ENST00000532699 INO80Q9ULG1 1556 aaPredicted RBP20.32■□□□□ 0.84
SDHD-213ENST00000532699 SUPT6HQ7KZ85 1726 aaKnown RBP20.31■□□□□ 0.84
SDHD-213ENST00000532699 CEBPAP49715 358 aaPredicted RBP20.3■□□□□ 0.84
SDHD-213ENST00000532699 EHBP1L1Q8N3D4 1523 aa20.3■□□□□ 0.84
SDHD-213ENST00000532699 STRCQ7RTU9 1775 aa20.29■□□□□ 0.84
SDHD-213ENST00000532699 HNRNPMP52272 730 aaKnown RBP eCLIP20.28■□□□□ 0.84
SDHD-213ENST00000532699 PLXNC1O60486 1568 aa20.27■□□□□ 0.84
SDHD-213ENST00000532699 ZNF777Q9ULD5 760 aaPredicted RBP20.27■□□□□ 0.84
SDHD-213ENST00000532699 ATP7AQ04656 1500 aa20.27■□□□□ 0.83
SDHD-213ENST00000532699 KIAA1107Q9UPP5 1409 aa20.27■□□□□ 0.83
SDHD-213ENST00000532699 MTUS2Q5JR59 1369 aa20.26■□□□□ 0.83
SDHD-213ENST00000532699 LOC105371045A0A1W2PR82 267 aa20.25■□□□□ 0.83
SDHD-213ENST00000532699 ZNF644Q9H582 1327 aaPredicted RBP20.25■□□□□ 0.83
SDHD-213ENST00000532699 CCNB3Q8WWL7 1395 aa20.24■□□□□ 0.83
SDHD-213ENST00000532699 MBD5Q9P267 1494 aa20.24■□□□□ 0.83
SDHD-213ENST00000532699 MYT1LQ9UL68 1186 aa20.23■□□□□ 0.83
SDHD-213ENST00000532699 MROH2AA6NES4 1674 aa20.22■□□□□ 0.83
SDHD-213ENST00000532699 ADGBQ8N7X0 1667 aa20.22■□□□□ 0.83
SDHD-213ENST00000532699 CFDP1Q9UEE9 299 aaPredicted RBP20.22■□□□□ 0.83
SDHD-213ENST00000532699 PLEKHH2Q8IVE3 1493 aa20.21■□□□□ 0.83
SDHD-213ENST00000532699 CLTCQ00610 1675 aaKnown RBP20.2■□□□□ 0.82
SDHD-213ENST00000532699 SPAG9O60271 1321 aaKnown RBP20.19■□□□□ 0.82
SDHD-213ENST00000532699 NCOA2Q15596 1464 aa20.18■□□□□ 0.82
SDHD-213ENST00000532699 A2MP01023 1474 aa20.16■□□□□ 0.82
SDHD-213ENST00000532699 VPS8Q8N3P4 1428 aa20.14■□□□□ 0.81
SDHD-213ENST00000532699 CAMSAP2Q08AD1 1489 aa20.12■□□□□ 0.81
SDHD-213ENST00000532699 UHRF1BP1Q6BDS2 1440 aa20.11■□□□□ 0.81
SDHD-213ENST00000532699 LRRC9Q6ZRR7 1453 aa20.11■□□□□ 0.81
SDHD-213ENST00000532699 CNTLNQ9NXG0 1405 aa20.1■□□□□ 0.81
SDHD-213ENST00000532699 FBXO41Q8TF61 875 aa20.09■□□□□ 0.81
SDHD-213ENST00000532699 RTEL1-TNFRSF6BF6WH68 1400 aa20.08■□□□□ 0.8
SDHD-213ENST00000532699 ARHGEF5Q12774 1597 aa20.08■□□□□ 0.8
SDHD-213ENST00000532699 ZMYM3Q14202 1370 aa20.08■□□□□ 0.8
SDHD-213ENST00000532699 ZNF142P52746 1687 aaPredicted RBP20.07■□□□□ 0.8
SDHD-213ENST00000532699 CCDC141Q6ZP82 1450 aa20.06■□□□□ 0.8
SDHD-213ENST00000532699 MYO3AQ8NEV4 1616 aa20.06■□□□□ 0.8
SDHD-213ENST00000532699 KANK4Q5T7N3 995 aaPredicted RBP20.06■□□□□ 0.8
SDHD-213ENST00000532699 MAP3K1Q13233 1512 aa20.06■□□□□ 0.8
SDHD-213ENST00000532699 NPATQ14207 1427 aa20.04■□□□□ 0.8
SDHD-213ENST00000532699 PTPRKQ15262 1439 aa20.02■□□□□ 0.8
SDHD-213ENST00000532699 DHX29Q7Z478 1369 aaKnown RBP20.02■□□□□ 0.8
SDHD-213ENST00000532699 CAMSAP1Q5T5Y3 1602 aa20.01■□□□□ 0.79
SDHD-213ENST00000532699 NCOA1Q15788 1441 aa20.01■□□□□ 0.79
SDHD-213ENST00000532699 GGT6Q6P531 493 aa20■□□□□ 0.79
SDHD-213ENST00000532699 ESF1Q9H501 851 aaKnown RBP20■□□□□ 0.79
SDHD-213ENST00000532699 MAST1Q9Y2H9 1570 aa20■□□□□ 0.79
SDHD-213ENST00000532699 CERKQ8TCT0 537 aa19.98■□□□□ 0.79
SDHD-213ENST00000532699 CEP170BQ9Y4F5 1589 aaPredicted RBP19.98■□□□□ 0.79
SDHD-213ENST00000532699 PTPRTO14522 1441 aa19.97■□□□□ 0.79
SDHD-213ENST00000532699 LTBP4Q8N2S1 1624 aa19.97■□□□□ 0.79
SDHD-213ENST00000532699 RNF17Q9BXT8 1623 aaKnown RBP19.95■□□□□ 0.78
SDHD-213ENST00000532699 CROCC2H7BZ55 1655 aa19.95■□□□□ 0.78
SDHD-213ENST00000532699 MROH1Q8NDA8 1641 aa19.94■□□□□ 0.78
SDHD-213ENST00000532699 CFAP65Q6ZU64 1925 aaKnown RBP19.94■□□□□ 0.78
SDHD-213ENST00000532699 MYOM3Q5VTT5 1437 aa19.93■□□□□ 0.78
SDHD-213ENST00000532699 DNMT1P26358 1616 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms