RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 CDC42BPBQ9Y5S2 1711 aa24.82■■□□□ 1.56
CTSB-225ENST00000532409 PREX2Q70Z35 1606 aa24.79■■□□□ 1.56
CTSB-225ENST00000532409 CDC42BPAQ5VT25 1732 aa24.78■■□□□ 1.56
CTSB-225ENST00000532409 POGZQ7Z3K3 1410 aa24.78■■□□□ 1.56
CTSB-225ENST00000532409 MTUS2Q5JR59 1369 aa24.77■■□□□ 1.56
CTSB-225ENST00000532409 VPS8Q8N3P4 1428 aa24.76■■□□□ 1.55
CTSB-225ENST00000532409 ZMYM4Q5VZL5 1548 aa24.76■■□□□ 1.55
CTSB-225ENST00000532409 ARHGEF40Q8TER5 1519 aa24.76■■□□□ 1.55
CTSB-225ENST00000532409 YEATS2Q9ULM3 1422 aa24.74■■□□□ 1.55
CTSB-225ENST00000532409 GPATCH8Q9UKJ3 1502 aaKnown RBP24.72■■□□□ 1.55
CTSB-225ENST00000532409 ZFYVE16Q7Z3T8 1539 aa24.71■■□□□ 1.55
CTSB-225ENST00000532409 EHBP1L1Q8N3D4 1523 aa24.71■■□□□ 1.55
CTSB-225ENST00000532409 ARHGEF12Q9NZN5 1544 aa24.7■■□□□ 1.54
CTSB-225ENST00000532409 AFAP1Q8N556 730 aa24.69■■□□□ 1.54
CTSB-225ENST00000532409 ABCC1P33527 1531 aa24.69■■□□□ 1.54
CTSB-225ENST00000532409 TIAM1Q13009 1591 aa24.67■■□□□ 1.54
CTSB-225ENST00000532409 SIGLEC1Q9BZZ2 1709 aa24.67■■□□□ 1.54
CTSB-225ENST00000532409 ZNF777Q9ULD5 760 aaPredicted RBP24.67■■□□□ 1.54
CTSB-225ENST00000532409 TRAPPC8Q9Y2L5 1435 aa24.66■■□□□ 1.54
CTSB-225ENST00000532409 SAMD9LQ8IVG5 1584 aa24.66■■□□□ 1.54
CTSB-225ENST00000532409 CCNB3Q8WWL7 1395 aa24.66■■□□□ 1.54
CTSB-225ENST00000532409 ARID4BQ4LE39 1312 aaPredicted RBP24.65■■□□□ 1.54
CTSB-225ENST00000532409 ZNF518AQ6AHZ1 1483 aa24.65■■□□□ 1.54
CTSB-225ENST00000532409 ITSN2Q9NZM3 1697 aa24.65■■□□□ 1.54
CTSB-225ENST00000532409 MAGI2Q86UL8 1455 aa24.64■■□□□ 1.54
CTSB-225ENST00000532409 KDM5CP41229 1560 aa24.63■■□□□ 1.53
CTSB-225ENST00000532409 CFDP1Q9UEE9 299 aaPredicted RBP24.61■■□□□ 1.53
CTSB-225ENST00000532409 ADAMTSL3P82987 1691 aa24.6■■□□□ 1.53
CTSB-225ENST00000532409 BCORL1Q5H9F3 1711 aa24.6■■□□□ 1.53
CTSB-225ENST00000532409 SYCP2Q9BX26 1530 aa24.6■■□□□ 1.53
CTSB-225ENST00000532409 NCOA2Q15596 1464 aa24.58■■□□□ 1.53
CTSB-225ENST00000532409 HECW2Q9P2P5 1572 aa24.58■■□□□ 1.52
CTSB-225ENST00000532409 HNRNPMP52272 730 aaKnown RBP eCLIP24.57■■□□□ 1.52
CTSB-225ENST00000532409 KANK4Q5T7N3 995 aaPredicted RBP24.57■■□□□ 1.52
CTSB-225ENST00000532409 MYT1LQ9UL68 1186 aa24.57■■□□□ 1.52
CTSB-225ENST00000532409 SUPT6HQ7KZ85 1726 aaKnown RBP24.57■■□□□ 1.52
CTSB-225ENST00000532409 ZNF644Q9H582 1327 aaPredicted RBP24.57■■□□□ 1.52
CTSB-225ENST00000532409 LRRC9Q6ZRR7 1453 aa24.57■■□□□ 1.52
CTSB-225ENST00000532409 ATP10AO60312 1499 aa24.56■■□□□ 1.52
CTSB-225ENST00000532409 MADDQ8WXG6 1647 aa24.55■■□□□ 1.52
CTSB-225ENST00000532409 ABCA6Q8N139 1617 aa24.54■■□□□ 1.52
CTSB-225ENST00000532409 DIP2CQ9Y2E4 1556 aa24.54■■□□□ 1.52
CTSB-225ENST00000532409 C9orf84Q5VXU9 1444 aa24.53■■□□□ 1.52
CTSB-225ENST00000532409 MLH3Q9UHC1 1453 aa24.53■■□□□ 1.52
CTSB-225ENST00000532409 MLECQ14165 292 aa24.52■■□□□ 1.52
CTSB-225ENST00000532409 MAP3K1Q13233 1512 aa24.51■■□□□ 1.51
CTSB-225ENST00000532409 KIDINS220Q9ULH0 1771 aa24.5■■□□□ 1.51
CTSB-225ENST00000532409 KIAA1107Q9UPP5 1409 aa24.5■■□□□ 1.51
CTSB-225ENST00000532409 PTPRMP28827 1452 aa24.5■■□□□ 1.51
CTSB-225ENST00000532409 PLEKHH2Q8IVE3 1493 aa24.49■■□□□ 1.51
CTSB-225ENST00000532409 RIMS1Q86UR5 1692 aaKnown RBP24.47■■□□□ 1.51
CTSB-225ENST00000532409 SPAG9O60271 1321 aaKnown RBP24.45■■□□□ 1.5
CTSB-225ENST00000532409 MBD5Q9P267 1494 aa24.45■■□□□ 1.5
CTSB-225ENST00000532409 CAMSAP2Q08AD1 1489 aa24.43■■□□□ 1.5
CTSB-225ENST00000532409 REREQ9P2R6 1566 aa24.42■■□□□ 1.5
CTSB-225ENST00000532409 INO80Q9ULG1 1556 aaPredicted RBP24.42■■□□□ 1.5
CTSB-225ENST00000532409 ATP7AQ04656 1500 aa24.41■■□□□ 1.5
CTSB-225ENST00000532409 PLPPR3Q6T4P5 718 aa24.41■■□□□ 1.5
CTSB-225ENST00000532409 APLP2Q06481 763 aa24.4■■□□□ 1.5
CTSB-225ENST00000532409 FER1L4A9Z1Z3 1794 aa24.39■■□□□ 1.5
CTSB-225ENST00000532409 AGLP35573 1532 aa24.35■■□□□ 1.49
CTSB-225ENST00000532409 MYOM3Q5VTT5 1437 aa24.34■■□□□ 1.49
CTSB-225ENST00000532409 CCDC141Q6ZP82 1450 aa24.32■■□□□ 1.48
CTSB-225ENST00000532409 A2MP01023 1474 aa24.3■■□□□ 1.48
CTSB-225ENST00000532409 PLXNC1O60486 1568 aa24.29■■□□□ 1.48
CTSB-225ENST00000532409 CEBPAP49715 358 aaPredicted RBP24.28■■□□□ 1.48
CTSB-225ENST00000532409 ARHGEF5Q12774 1597 aa24.28■■□□□ 1.48
CTSB-225ENST00000532409 MIA2Q96PC5 1412 aa24.27■■□□□ 1.48
CTSB-225ENST00000532409 RTEL1-TNFRSF6BF6WH68 1400 aa24.26■■□□□ 1.47
CTSB-225ENST00000532409 ADGBQ8N7X0 1667 aa24.25■■□□□ 1.47
CTSB-225ENST00000532409 RSPH4AQ5TD94 716 aa24.22■■□□□ 1.47
CTSB-225ENST00000532409 LMTK3Q96Q04 1460 aa24.21■■□□□ 1.47
CTSB-225ENST00000532409 PTPN23Q9H3S7 1636 aa24.21■■□□□ 1.47
CTSB-225ENST00000532409 FGD6Q6ZV73 1430 aa24.19■■□□□ 1.46
CTSB-225ENST00000532409 DHX29Q7Z478 1369 aaKnown RBP24.18■■□□□ 1.46
CTSB-225ENST00000532409 TSPY4P0CV99 314 aa24.18■■□□□ 1.46
CTSB-225ENST00000532409 TSPY10P0CW01 314 aa24.18■■□□□ 1.46
CTSB-225ENST00000532409 C3P01024 1663 aa24.18■■□□□ 1.46
CTSB-225ENST00000532409 GGT6Q6P531 493 aa24.17■■□□□ 1.46
CTSB-225ENST00000532409 ESF1Q9H501 851 aaKnown RBP24.17■■□□□ 1.46
CTSB-225ENST00000532409 MAST1Q9Y2H9 1570 aa24.15■■□□□ 1.46
CTSB-225ENST00000532409 HSPA2P54652 639 aa24.14■■□□□ 1.45
CTSB-225ENST00000532409 PPARGC1BQ86YN6 1023 aaKnown RBP24.14■■□□□ 1.45
CTSB-225ENST00000532409 ABCC5O15440 1437 aa24.13■■□□□ 1.45
CTSB-225ENST00000532409 CLTCQ00610 1675 aaKnown RBP24.13■■□□□ 1.45
CTSB-225ENST00000532409 TCOF1Q13428 1488 aaKnown RBP24.13■■□□□ 1.45
CTSB-225ENST00000532409 CNTLNQ9NXG0 1405 aa24.12■■□□□ 1.45
CTSB-225ENST00000532409 KIF3BO15066 747 aa24.11■■□□□ 1.45
CTSB-225ENST00000532409 CROCC2H7BZ55 1655 aa24.1■■□□□ 1.45
CTSB-225ENST00000532409 DAPK1P53355 1430 aa24.09■■□□□ 1.45
CTSB-225ENST00000532409 ZMYM3Q14202 1370 aa24.08■■□□□ 1.45
CTSB-225ENST00000532409 DNMT1P26358 1616 aaKnown RBP24.08■■□□□ 1.45
CTSB-225ENST00000532409 MROH2AA6NES4 1674 aa24.08■■□□□ 1.44
CTSB-225ENST00000532409 PREX1Q8TCU6 1659 aa24.08■■□□□ 1.44
CTSB-225ENST00000532409 FAM50AQ14320 339 aaKnown RBP24.05■■□□□ 1.44
CTSB-225ENST00000532409 SHANK2Q9UPX8 1470 aa24.05■■□□□ 1.44
CTSB-225ENST00000532409 SETD1BQ9UPS6 1966 aaKnown RBP24.02■■□□□ 1.44
CTSB-225ENST00000532409 RRP7BPQ9NSQ0 103 aa24.02■■□□□ 1.44
CTSB-225ENST00000532409 CHIC2Q9UKJ5 165 aa24.02■■□□□ 1.44
CTSB-225ENST00000532409 UHRF1BP1Q6BDS2 1440 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms