RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 GPATCH8Q9UKJ3 1502 aaKnown RBP22.11■■□□□ 1.13
TSPAN4-220ENST00000532375 PREX2Q70Z35 1606 aa22.11■■□□□ 1.13
TSPAN4-220ENST00000532375 RICTORQ6R327 1708 aa22.1■■□□□ 1.13
TSPAN4-220ENST00000532375 DENND4BO75064 1496 aaPredicted RBP22.09■■□□□ 1.13
TSPAN4-220ENST00000532375 ARHGAP5Q13017 1502 aa22.08■■□□□ 1.13
TSPAN4-220ENST00000532375 KANK4Q5T7N3 995 aaPredicted RBP22.08■■□□□ 1.13
TSPAN4-220ENST00000532375 SCAPERQ9BY12 1400 aa22.07■■□□□ 1.12
TSPAN4-220ENST00000532375 ADGRL1O94910 1474 aa22.07■■□□□ 1.12
TSPAN4-220ENST00000532375 LRRC9Q6ZRR7 1453 aa22.07■■□□□ 1.12
TSPAN4-220ENST00000532375 ARHGEF12Q9NZN5 1544 aa22.03■■□□□ 1.12
TSPAN4-220ENST00000532375 NCOA2Q15596 1464 aa22.02■■□□□ 1.12
TSPAN4-220ENST00000532375 CCNB3Q8WWL7 1395 aa22.01■■□□□ 1.11
TSPAN4-220ENST00000532375 POGZQ7Z3K3 1410 aa22.01■■□□□ 1.11
TSPAN4-220ENST00000532375 ZMYM4Q5VZL5 1548 aa22.01■■□□□ 1.11
TSPAN4-220ENST00000532375 SUPT6HQ7KZ85 1726 aaKnown RBP22■■□□□ 1.11
TSPAN4-220ENST00000532375 ABCC1P33527 1531 aa21.99■■□□□ 1.11
TSPAN4-220ENST00000532375 SAMD9LQ8IVG5 1584 aa21.99■■□□□ 1.11
TSPAN4-220ENST00000532375 AFAP1Q8N556 730 aa21.97■■□□□ 1.11
TSPAN4-220ENST00000532375 CFDP1Q9UEE9 299 aaPredicted RBP21.97■■□□□ 1.11
TSPAN4-220ENST00000532375 KDM4FA0A1W2PPD8 638 aa21.96■■□□□ 1.11
TSPAN4-220ENST00000532375 TRAPPC8Q9Y2L5 1435 aa21.96■■□□□ 1.11
TSPAN4-220ENST00000532375 KDM5CP41229 1560 aa21.95■■□□□ 1.1
TSPAN4-220ENST00000532375 ITSN2Q9NZM3 1697 aa21.95■■□□□ 1.1
TSPAN4-220ENST00000532375 YEATS2Q9ULM3 1422 aa21.94■■□□□ 1.1
TSPAN4-220ENST00000532375 MAGI2Q86UL8 1455 aa21.94■■□□□ 1.1
TSPAN4-220ENST00000532375 ZNF518AQ6AHZ1 1483 aa21.93■■□□□ 1.1
TSPAN4-220ENST00000532375 ZNF644Q9H582 1327 aaPredicted RBP21.93■■□□□ 1.1
TSPAN4-220ENST00000532375 ZNF777Q9ULD5 760 aaPredicted RBP21.93■■□□□ 1.1
TSPAN4-220ENST00000532375 KIAA1107Q9UPP5 1409 aa21.92■■□□□ 1.1
TSPAN4-220ENST00000532375 AEBP2Q6ZN18 517 aaPredicted RBP21.91■■□□□ 1.1
TSPAN4-220ENST00000532375 ARHGEF40Q8TER5 1519 aa21.9■■□□□ 1.1
TSPAN4-220ENST00000532375 HNRNPMP52272 730 aaKnown RBP eCLIP21.9■■□□□ 1.1
TSPAN4-220ENST00000532375 APLP2Q06481 763 aa21.9■■□□□ 1.1
TSPAN4-220ENST00000532375 SYCP2Q9BX26 1530 aa21.89■■□□□ 1.09
TSPAN4-220ENST00000532375 ZFYVE16Q7Z3T8 1539 aa21.88■■□□□ 1.09
TSPAN4-220ENST00000532375 PLEKHH2Q8IVE3 1493 aa21.88■■□□□ 1.09
TSPAN4-220ENST00000532375 MBD5Q9P267 1494 aa21.88■■□□□ 1.09
TSPAN4-220ENST00000532375 MLH3Q9UHC1 1453 aa21.88■■□□□ 1.09
TSPAN4-220ENST00000532375 SIGLEC1Q9BZZ2 1709 aa21.86■■□□□ 1.09
TSPAN4-220ENST00000532375 KIDINS220Q9ULH0 1771 aa21.84■■□□□ 1.09
TSPAN4-220ENST00000532375 HECW2Q9P2P5 1572 aa21.83■■□□□ 1.09
TSPAN4-220ENST00000532375 MYOM3Q5VTT5 1437 aa21.83■■□□□ 1.09
TSPAN4-220ENST00000532375 ATP10AO60312 1499 aa21.83■■□□□ 1.08
TSPAN4-220ENST00000532375 CAMSAP2Q08AD1 1489 aa21.81■■□□□ 1.08
TSPAN4-220ENST00000532375 MIA2Q96PC5 1412 aa21.8■■□□□ 1.08
TSPAN4-220ENST00000532375 DIP2CQ9Y2E4 1556 aa21.8■■□□□ 1.08
TSPAN4-220ENST00000532375 ABCA6Q8N139 1617 aa21.8■■□□□ 1.08
TSPAN4-220ENST00000532375 ADAMTSL3P82987 1691 aa21.77■■□□□ 1.08
TSPAN4-220ENST00000532375 SPAG9O60271 1321 aaKnown RBP21.77■■□□□ 1.07
TSPAN4-220ENST00000532375 BCORL1Q5H9F3 1711 aa21.76■■□□□ 1.07
TSPAN4-220ENST00000532375 C9orf84Q5VXU9 1444 aa21.76■■□□□ 1.07
TSPAN4-220ENST00000532375 REREQ9P2R6 1566 aa21.76■■□□□ 1.07
TSPAN4-220ENST00000532375 INO80Q9ULG1 1556 aaPredicted RBP21.76■■□□□ 1.07
TSPAN4-220ENST00000532375 ARHGEF5Q12774 1597 aa21.74■■□□□ 1.07
TSPAN4-220ENST00000532375 RSPH4AQ5TD94 716 aa21.74■■□□□ 1.07
TSPAN4-220ENST00000532375 ATP7AQ04656 1500 aa21.73■■□□□ 1.07
TSPAN4-220ENST00000532375 ARID4BQ4LE39 1312 aaPredicted RBP21.72■■□□□ 1.07
TSPAN4-220ENST00000532375 RTEL1-TNFRSF6BF6WH68 1400 aa21.72■■□□□ 1.07
TSPAN4-220ENST00000532375 FGD6Q6ZV73 1430 aa21.72■■□□□ 1.07
TSPAN4-220ENST00000532375 CCDC141Q6ZP82 1450 aa21.71■■□□□ 1.07
TSPAN4-220ENST00000532375 MYT1LQ9UL68 1186 aa21.71■■□□□ 1.07
TSPAN4-220ENST00000532375 PTPN23Q9H3S7 1636 aa21.69■■□□□ 1.06
TSPAN4-220ENST00000532375 TCOF1Q13428 1488 aaKnown RBP21.69■■□□□ 1.06
TSPAN4-220ENST00000532375 AGLP35573 1532 aa21.69■■□□□ 1.06
TSPAN4-220ENST00000532375 PPARGC1BQ86YN6 1023 aaKnown RBP21.66■■□□□ 1.06
TSPAN4-220ENST00000532375 MADDQ8WXG6 1647 aa21.66■■□□□ 1.06
TSPAN4-220ENST00000532375 PLXNC1O60486 1568 aa21.65■■□□□ 1.06
TSPAN4-220ENST00000532375 MAST1Q9Y2H9 1570 aa21.64■■□□□ 1.05
TSPAN4-220ENST00000532375 MLECQ14165 292 aa21.63■■□□□ 1.05
TSPAN4-220ENST00000532375 A2MP01023 1474 aa21.63■■□□□ 1.05
TSPAN4-220ENST00000532375 ABCC5O15440 1437 aa21.63■■□□□ 1.05
TSPAN4-220ENST00000532375 ADGBQ8N7X0 1667 aa21.62■■□□□ 1.05
TSPAN4-220ENST00000532375 PTPRMP28827 1452 aa21.61■■□□□ 1.05
TSPAN4-220ENST00000532375 TSPY4P0CV99 314 aa21.61■■□□□ 1.05
TSPAN4-220ENST00000532375 TSPY10P0CW01 314 aa21.61■■□□□ 1.05
TSPAN4-220ENST00000532375 DHX29Q7Z478 1369 aaKnown RBP21.59■■□□□ 1.05
TSPAN4-220ENST00000532375 DNMT1P26358 1616 aaKnown RBP21.58■■□□□ 1.05
TSPAN4-220ENST00000532375 RIMS1Q86UR5 1692 aaKnown RBP21.58■■□□□ 1.05
TSPAN4-220ENST00000532375 DAPK1P53355 1430 aa21.57■■□□□ 1.04
TSPAN4-220ENST00000532375 CROCC2H7BZ55 1655 aa21.56■■□□□ 1.04
TSPAN4-220ENST00000532375 FER1L4A9Z1Z3 1794 aa21.56■■□□□ 1.04
TSPAN4-220ENST00000532375 SHANK2Q9UPX8 1470 aa21.55■■□□□ 1.04
TSPAN4-220ENST00000532375 FAM50AQ14320 339 aaKnown RBP21.51■■□□□ 1.03
TSPAN4-220ENST00000532375 PTPRKQ15262 1439 aa21.49■■□□□ 1.03
TSPAN4-220ENST00000532375 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.48■■□□□ 1.034e-6■■■■■ 46.2
TSPAN4-220ENST00000532375 NCOA1Q15788 1441 aa21.46■■□□□ 1.03
TSPAN4-220ENST00000532375 KIF3BO15066 747 aa21.46■■□□□ 1.03
TSPAN4-220ENST00000532375 CEBPAP49715 358 aaPredicted RBP21.46■■□□□ 1.03
TSPAN4-220ENST00000532375 GGT6Q6P531 493 aa21.46■■□□□ 1.03
TSPAN4-220ENST00000532375 CHIC2Q9UKJ5 165 aa21.46■■□□□ 1.03
TSPAN4-220ENST00000532375 RRBP1Q9P2E9 1410 aaKnown RBP21.46■■□□□ 1.03
TSPAN4-220ENST00000532375 PPP6R1Q9UPN7 881 aa21.45■■□□□ 1.02
TSPAN4-220ENST00000532375 ADGRL2O95490 1459 aa21.45■■□□□ 1.02
TSPAN4-220ENST00000532375 DUOX2Q9NRD8 1548 aa21.45■■□□□ 1.02
TSPAN4-220ENST00000532375 RRP7BPQ9NSQ0 103 aa21.44■■□□□ 1.02
TSPAN4-220ENST00000532375 KIF15Q9NS87 1388 aa21.44■■□□□ 1.02
TSPAN4-220ENST00000532375 CNTLNQ9NXG0 1405 aa21.43■■□□□ 1.02
TSPAN4-220ENST00000532375 C3P01024 1663 aa21.43■■□□□ 1.02
TSPAN4-220ENST00000532375 EIF2AK4Q9P2K8 1649 aaKnown RBP21.41■■□□□ 1.02
TSPAN4-220ENST00000532375 ANKRD30AQ9BXX3 1397 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms