RNA–Protein interactions for RNA: ENST00000531688.1

IFITM3-203, Transcript of interferon induced transmembrane protein 3, humanhuman

TSL 3

Gene IFITM3, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM3-203ENST00000531688 PLCH2O75038 1416 aa17.46■□□□□ 0.39
IFITM3-203ENST00000531688 C9orf84Q5VXU9 1444 aa17.45■□□□□ 0.38
IFITM3-203ENST00000531688 HECW1Q76N89 1606 aa17.44■□□□□ 0.38
IFITM3-203ENST00000531688 DMRT2Q9Y5R5 561 aa17.44■□□□□ 0.38
IFITM3-203ENST00000531688 SCAPERQ9BY12 1400 aa17.44■□□□□ 0.38
IFITM3-203ENST00000531688 ATP10AO60312 1499 aa17.44■□□□□ 0.38
IFITM3-203ENST00000531688 FER1L4A9Z1Z3 1794 aa17.43■□□□□ 0.38
IFITM3-203ENST00000531688 SIGLEC1Q9BZZ2 1709 aa17.41■□□□□ 0.38
IFITM3-203ENST00000531688 PREX1Q8TCU6 1659 aa17.4■□□□□ 0.38
IFITM3-203ENST00000531688 MLECQ14165 292 aa17.39■□□□□ 0.37
IFITM3-203ENST00000531688 ZNF518AQ6AHZ1 1483 aa17.38■□□□□ 0.37
IFITM3-203ENST00000531688 EFCAB2Q5VUJ9 269 aa17.37■□□□□ 0.37
IFITM3-203ENST00000531688 UHRF1BP1Q6BDS2 1440 aa17.37■□□□□ 0.37
IFITM3-203ENST00000531688 CDK13Q14004 1512 aaKnown RBP17.36■□□□□ 0.37
IFITM3-203ENST00000531688 CDK11AQ9UQ88 783 aaPredicted RBP17.35■□□□□ 0.37
IFITM3-203ENST00000531688 RANGAP1P46060 587 aaPredicted RBP17.34■□□□□ 0.37
IFITM3-203ENST00000531688 FMN1Q68DA7 1419 aa17.34■□□□□ 0.37
IFITM3-203ENST00000531688 KDM5CP41229 1560 aa17.33■□□□□ 0.37
IFITM3-203ENST00000531688 REREQ9P2R6 1566 aa17.32■□□□□ 0.36
IFITM3-203ENST00000531688 PTPRTO14522 1441 aa17.32■□□□□ 0.36
IFITM3-203ENST00000531688 STRCQ7RTU9 1775 aa17.31■□□□□ 0.36
IFITM3-203ENST00000531688 MYO5CQ9NQX4 1742 aa17.3■□□□□ 0.36
IFITM3-203ENST00000531688 SETD1BQ9UPS6 1966 aaKnown RBP17.3■□□□□ 0.36
IFITM3-203ENST00000531688 IQSEC2Q5JU85 1478 aa17.3■□□□□ 0.36
IFITM3-203ENST00000531688 KIF14Q15058 1648 aa17.29■□□□□ 0.36
IFITM3-203ENST00000531688 CEBPAP49715 358 aaPredicted RBP17.28■□□□□ 0.36
IFITM3-203ENST00000531688 CLIP1P30622 1438 aa17.28■□□□□ 0.36
IFITM3-203ENST00000531688 MLH3Q9UHC1 1453 aa17.27■□□□□ 0.36
IFITM3-203ENST00000531688 TROQ12816 1431 aaPredicted RBP17.27■□□□□ 0.35
IFITM3-203ENST00000531688 AGLP35573 1532 aa17.26■□□□□ 0.35
IFITM3-203ENST00000531688 ARHGAP5Q13017 1502 aa17.26■□□□□ 0.35
IFITM3-203ENST00000531688 DIP2CQ9Y2E4 1556 aa17.26■□□□□ 0.35
IFITM3-203ENST00000531688 CNTLNQ9NXG0 1405 aa17.24■□□□□ 0.35
IFITM3-203ENST00000531688 TRAPPC8Q9Y2L5 1435 aa17.24■□□□□ 0.35
IFITM3-203ENST00000531688 AFAP1Q8N556 730 aa17.23■□□□□ 0.35
IFITM3-203ENST00000531688 ESF1Q9H501 851 aaKnown RBP17.22■□□□□ 0.35
IFITM3-203ENST00000531688 NCOA1Q15788 1441 aa17.21■□□□□ 0.35
IFITM3-203ENST00000531688 LTBP4Q8N2S1 1624 aa17.2■□□□□ 0.34
IFITM3-203ENST00000531688 ABCA6Q8N139 1617 aa17.19■□□□□ 0.34
IFITM3-203ENST00000531688 MYT1LQ9UL68 1186 aa17.19■□□□□ 0.34
IFITM3-203ENST00000531688 NPATQ14207 1427 aa17.19■□□□□ 0.34
IFITM3-203ENST00000531688 ARHGAP35Q9NRY4 1499 aa17.18■□□□□ 0.34
IFITM3-203ENST00000531688 ATP1B4Q9UN42 357 aaPredicted RBP17.18■□□□□ 0.34
IFITM3-203ENST00000531688 ABCC1P33527 1531 aa17.17■□□□□ 0.34
IFITM3-203ENST00000531688 C3P01024 1663 aa17.17■□□□□ 0.34
IFITM3-203ENST00000531688 PREX2Q70Z35 1606 aa17.14■□□□□ 0.33
IFITM3-203ENST00000531688 UBTFP17480 764 aaKnown RBP17.13■□□□□ 0.33
IFITM3-203ENST00000531688 CCDC18Q5T9S5 1454 aa17.12■□□□□ 0.33
IFITM3-203ENST00000531688 MROH2AA6NES4 1674 aa17.1■□□□□ 0.33
IFITM3-203ENST00000531688 CDC42BPBQ9Y5S2 1711 aa17.1■□□□□ 0.33
IFITM3-203ENST00000531688 PLA2R1Q13018 1463 aa17.1■□□□□ 0.33
IFITM3-203ENST00000531688 ITSN2Q9NZM3 1697 aa17.1■□□□□ 0.33
IFITM3-203ENST00000531688 UBAP1LF5GYI3 381 aa17.09■□□□□ 0.33
IFITM3-203ENST00000531688 CAMSAP1Q5T5Y3 1602 aa17.09■□□□□ 0.33
IFITM3-203ENST00000531688 KIDINS220Q9ULH0 1771 aa17.08■□□□□ 0.33
IFITM3-203ENST00000531688 CASKIN1Q8WXD9 1431 aa17.07■□□□□ 0.32
IFITM3-203ENST00000531688 PKD2Q13563 968 aa17.07■□□□□ 0.32
IFITM3-203ENST00000531688 ZMYM3Q14202 1370 aa17.06■□□□□ 0.32
IFITM3-203ENST00000531688 SAMD9LQ8IVG5 1584 aa17.05■□□□□ 0.32
IFITM3-203ENST00000531688 TCOF1Q13428 1488 aaKnown RBP17.04■□□□□ 0.32
IFITM3-203ENST00000531688 ZNF142P52746 1687 aaPredicted RBP17.04■□□□□ 0.32
IFITM3-203ENST00000531688 SPAG9O60271 1321 aaKnown RBP17.02■□□□□ 0.32
IFITM3-203ENST00000531688 PLEKHH2Q8IVE3 1493 aa17.02■□□□□ 0.32
IFITM3-203ENST00000531688 KIAA1107Q9UPP5 1409 aa17.02■□□□□ 0.31
IFITM3-203ENST00000531688 PLXNC1O60486 1568 aa17.02■□□□□ 0.31
IFITM3-203ENST00000531688 MED1Q15648 1581 aaPredicted RBP17.02■□□□□ 0.31
IFITM3-203ENST00000531688 LRRIQ1Q96JM4 1722 aa17.01■□□□□ 0.31
IFITM3-203ENST00000531688 ZNF335Q9H4Z2 1342 aaPredicted RBP17.01■□□□□ 0.31
IFITM3-203ENST00000531688 PPP6R1Q9UPN7 881 aa17.01■□□□□ 0.31
IFITM3-203ENST00000531688 FYCO1Q9BQS8 1478 aa17■□□□□ 0.31
IFITM3-203ENST00000531688 PTPRKQ15262 1439 aa17■□□□□ 0.31
IFITM3-203ENST00000531688 CEP170BQ9Y4F5 1589 aaPredicted RBP17■□□□□ 0.31
IFITM3-203ENST00000531688 ATP7AQ04656 1500 aa17■□□□□ 0.31
IFITM3-203ENST00000531688 SYCP2Q9BX26 1530 aa17■□□□□ 0.31
IFITM3-203ENST00000531688 MYO3AQ8NEV4 1616 aa16.99■□□□□ 0.31
IFITM3-203ENST00000531688 NCKAP5LQ9HCH0 1330 aa16.98■□□□□ 0.31
IFITM3-203ENST00000531688 CDC42BPAQ5VT25 1732 aa16.98■□□□□ 0.31
IFITM3-203ENST00000531688 A2MP01023 1474 aa16.98■□□□□ 0.31
IFITM3-203ENST00000531688 GPATCH8Q9UKJ3 1502 aaKnown RBP16.97■□□□□ 0.31
IFITM3-203ENST00000531688 INO80Q9ULG1 1556 aaPredicted RBP16.97■□□□□ 0.31
IFITM3-203ENST00000531688 SCAF1Q9H7N4 1312 aaKnown RBP16.95■□□□□ 0.3
IFITM3-203ENST00000531688 PHF23Q9BUL5 403 aaPredicted RBP16.94■□□□□ 0.3
IFITM3-203ENST00000531688 ZNF777Q9ULD5 760 aaPredicted RBP16.94■□□□□ 0.3
IFITM3-203ENST00000531688 A2ML1A8K2U0 1454 aa16.93■□□□□ 0.3
IFITM3-203ENST00000531688 CPS1P31327 1500 aa16.93■□□□□ 0.3
IFITM3-203ENST00000531688 EHMT2Q96KQ7 1210 aa16.93■□□□□ 0.3
IFITM3-203ENST00000531688 CLTCQ00610 1675 aaKnown RBP16.92■□□□□ 0.3
IFITM3-203ENST00000531688 HSPA1LP34931 641 aa16.92■□□□□ 0.3
IFITM3-203ENST00000531688 CFDP1Q9UEE9 299 aaPredicted RBP16.92■□□□□ 0.3
IFITM3-203ENST00000531688 FAM135AQ9P2D6 1515 aa16.91■□□□□ 0.3
IFITM3-203ENST00000531688 SUPT6HQ7KZ85 1726 aaKnown RBP16.91■□□□□ 0.3
IFITM3-203ENST00000531688 HNRNPMP52272 730 aaKnown RBP eCLIP16.9■□□□□ 0.3
IFITM3-203ENST00000531688 CCNB3Q8WWL7 1395 aa16.89■□□□□ 0.3
IFITM3-203ENST00000531688 TOM1O60784 492 aa16.89■□□□□ 0.29
IFITM3-203ENST00000531688 PIP4K2BP78356 416 aa16.89■□□□□ 0.29
IFITM3-203ENST00000531688 GGT6Q6P531 493 aa16.89■□□□□ 0.29
IFITM3-203ENST00000531688 ADGBQ8N7X0 1667 aa16.88■□□□□ 0.29
IFITM3-203ENST00000531688 RTEL1-TNFRSF6BF6WH68 1400 aa16.87■□□□□ 0.29
IFITM3-203ENST00000531688 DNMT1P26358 1616 aaKnown RBP16.86■□□□□ 0.29
IFITM3-203ENST00000531688 SHANK2Q9UPX8 1470 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms