RNA–Protein interactions for RNA: ENST00000531616.1

ARHGEF12-211, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 3

Gene ARHGEF12, Length 3,108 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-211ENST00000531616 RSPH4AQ5TD94 716 aa11.8□□□□□ -0.52
ARHGEF12-211ENST00000531616 PLEKHG3A1L390 1219 aa11.78□□□□□ -0.52
ARHGEF12-211ENST00000531616 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.78□□□□□ -0.52
ARHGEF12-211ENST00000531616 NEFLP07196 543 aa11.77□□□□□ -0.52
ARHGEF12-211ENST00000531616 HMGXB3Q12766 1538 aa11.76□□□□□ -0.53
ARHGEF12-211ENST00000531616 PDE4DQ08499 809 aa11.76□□□□□ -0.53
ARHGEF12-211ENST00000531616 KRI1Q8N9T8 703 aaKnown RBP11.76□□□□□ -0.53
ARHGEF12-211ENST00000531616 TESPA1A2RU30 521 aaPredicted RBP11.75□□□□□ -0.53
ARHGEF12-211ENST00000531616 BARGINQ6ZT62 677 aa11.75□□□□□ -0.53
ARHGEF12-211ENST00000531616 RBM26Q5T8P6 1007 aaKnown RBP11.74□□□□□ -0.53
ARHGEF12-211ENST00000531616 PRDM2Q13029 1718 aa11.73□□□□□ -0.53
ARHGEF12-211ENST00000531616 SMARCA4P51532 1647 aa11.73□□□□□ -0.53
ARHGEF12-211ENST00000531616 BAZ1AQ9NRL2 1556 aaPredicted RBP11.73□□□□□ -0.53
ARHGEF12-211ENST00000531616 CCDC97Q96F63 343 aaPredicted RBP11.72□□□□□ -0.53
ARHGEF12-211ENST00000531616 PSMD1Q99460 953 aa11.72□□□□□ -0.53
ARHGEF12-211ENST00000531616 PRDM16Q9HAZ2 1276 aa11.72□□□□□ -0.53
ARHGEF12-211ENST00000531616 AK7Q96M32 723 aa11.71□□□□□ -0.53
ARHGEF12-211ENST00000531616 STK24Q9Y6E0 443 aa11.7□□□□□ -0.54
ARHGEF12-211ENST00000531616 TRIM66O15016 1216 aa11.69□□□□□ -0.54
ARHGEF12-211ENST00000531616 CCDC125Q86Z20 511 aa11.68□□□□□ -0.54
ARHGEF12-211ENST00000531616 CCDC27Q2M243 656 aa11.67□□□□□ -0.54
ARHGEF12-211ENST00000531616 EIF4G1Q04637 1599 aaKnown RBP11.67□□□□□ -0.54
ARHGEF12-211ENST00000531616 U3KPZ7 1027 aaPredicted RBP11.66□□□□□ -0.54
ARHGEF12-211ENST00000531616 FLIIQ13045 1269 aa11.66□□□□□ -0.54
ARHGEF12-211ENST00000531616 PRDM10Q9NQV6 1147 aa11.66□□□□□ -0.54
ARHGEF12-211ENST00000531616 BCCIPQ9P287 314 aaKnown RBP eCLIP11.65□□□□□ -0.54
ARHGEF12-211ENST00000531616 PPP1R1BQ9UD71 204 aaPredicted RBP11.65□□□□□ -0.54
ARHGEF12-211ENST00000531616 TICAM2Q86XR7 235 aa11.64□□□□□ -0.55
ARHGEF12-211ENST00000531616 A6NJR5 290 aa11.62□□□□□ -0.55
ARHGEF12-211ENST00000531616 MCM6Q14566 821 aa11.62□□□□□ -0.55
ARHGEF12-211ENST00000531616 PROSER2Q86WR7 435 aaPredicted RBP11.62□□□□□ -0.55
ARHGEF12-211ENST00000531616 RIOK3O14730 519 aaKnown RBP11.62□□□□□ -0.55
ARHGEF12-211ENST00000531616 PKNOX2Q96KN3 472 aa11.61□□□□□ -0.55
ARHGEF12-211ENST00000531616 BRD1O95696 1058 aa11.58□□□□□ -0.56
ARHGEF12-211ENST00000531616 ARIH1Q9Y4X5 557 aaPredicted RBP11.58□□□□□ -0.56
ARHGEF12-211ENST00000531616 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.58□□□□□ -0.56
ARHGEF12-211ENST00000531616 FGD1P98174 961 aa11.58□□□□□ -0.56
ARHGEF12-211ENST00000531616 ARHGEF1Q92888 912 aaKnown RBP11.57□□□□□ -0.56
ARHGEF12-211ENST00000531616 DCAF8L1A6NGE4 600 aa11.56□□□□□ -0.56
ARHGEF12-211ENST00000531616 MLLT3P42568 568 aaPredicted RBP11.55□□□□□ -0.56
ARHGEF12-211ENST00000531616 FNBP4Q8N3X1 1017 aaPredicted RBP11.55□□□□□ -0.56
ARHGEF12-211ENST00000531616 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.55□□□□□ -0.568e-8■■□□□ 14.1
ARHGEF12-211ENST00000531616 KIAA1522Q9P206 1035 aaPredicted RBP11.55□□□□□ -0.56
ARHGEF12-211ENST00000531616 SERPINA10Q9UK55 444 aa11.55□□□□□ -0.56
ARHGEF12-211ENST00000531616 CC2D2AQ9P2K1 1620 aa11.54□□□□□ -0.56
ARHGEF12-211ENST00000531616 ZNF662Q6ZS27 426 aa11.54□□□□□ -0.56
ARHGEF12-211ENST00000531616 TOP2AP11388 1531 aaKnown RBP11.54□□□□□ -0.56
ARHGEF12-211ENST00000531616 CADPSQ9ULU8 1353 aa11.54□□□□□ -0.56
ARHGEF12-211ENST00000531616 PLSCR2Q9NRY7 297 aa11.53□□□□□ -0.56
ARHGEF12-211ENST00000531616 IVNS1ABPQ9Y6Y0 642 aa11.53□□□□□ -0.56
ARHGEF12-211ENST00000531616 E2F4Q16254 413 aa11.53□□□□□ -0.56
ARHGEF12-211ENST00000531616 FOSBP53539 338 aa11.51□□□□□ -0.57
ARHGEF12-211ENST00000531616 GPIHBP1Q8IV16 184 aa11.51□□□□□ -0.57
ARHGEF12-211ENST00000531616 CLSTN1O94985 981 aa11.5□□□□□ -0.57
ARHGEF12-211ENST00000531616 NOL8Q76FK4 1167 aaKnown RBP11.5□□□□□ -0.57
ARHGEF12-211ENST00000531616 IGSF5Q9NSI5 407 aa11.5□□□□□ -0.57
ARHGEF12-211ENST00000531616 NCAPD3P42695 1498 aa11.5□□□□□ -0.57
ARHGEF12-211ENST00000531616 SIRT1Q96EB6 747 aa11.5□□□□□ -0.57
ARHGEF12-211ENST00000531616 RFX1P22670 979 aa11.48□□□□□ -0.57
ARHGEF12-211ENST00000531616 ZEB1P37275 1124 aaPredicted RBP11.47□□□□□ -0.57
ARHGEF12-211ENST00000531616 WDR97A6NE52 1622 aa11.47□□□□□ -0.57
ARHGEF12-211ENST00000531616 SKIV2LQ15477 1246 aaKnown RBP11.46□□□□□ -0.57
ARHGEF12-211ENST00000531616 PARP9Q8IXQ6 854 aa11.46□□□□□ -0.58
ARHGEF12-211ENST00000531616 MROH2BQ7Z745 1585 aa11.45□□□□□ -0.58
ARHGEF12-211ENST00000531616 MRRFQ96E11 262 aaKnown RBP11.45□□□□□ -0.58
ARHGEF12-211ENST00000531616 CC2D2BQ6DHV5 1058 aa11.45□□□□□ -0.58
ARHGEF12-211ENST00000531616 DMRT2Q9Y5R5 561 aa11.45□□□□□ -0.58
ARHGEF12-211ENST00000531616 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.44□□□□□ -0.58
ARHGEF12-211ENST00000531616 RSF1Q96T23 1441 aaPredicted RBP11.44□□□□□ -0.58
ARHGEF12-211ENST00000531616 MARCH6O60337 910 aa11.44□□□□□ -0.58
ARHGEF12-211ENST00000531616 SPATA32Q96LK8 384 aa11.44□□□□□ -0.58
ARHGEF12-211ENST00000531616 GIMAP6Q6P9H5 292 aa11.41□□□□□ -0.58
ARHGEF12-211ENST00000531616 LOC102724159A0A0B4J2E5 919 aa11.41□□□□□ -0.58
ARHGEF12-211ENST00000531616 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.41□□□□□ -0.58
ARHGEF12-211ENST00000531616 PWP2Q15269 919 aaKnown RBP11.41□□□□□ -0.58
ARHGEF12-211ENST00000531616 HNRNPUL2Q1KMD3 747 aaKnown RBP11.41□□□□□ -0.58
ARHGEF12-211ENST00000531616 AMOTL2Q9Y2J4 779 aa11.41□□□□□ -0.58
ARHGEF12-211ENST00000531616 ANKRD62A6NC57 917 aa11.4□□□□□ -0.58
ARHGEF12-211ENST00000531616 LAMC3Q9Y6N6 1575 aa11.39□□□□□ -0.59
ARHGEF12-211ENST00000531616 ATAD2BQ9ULI0 1458 aa11.38□□□□□ -0.59
ARHGEF12-211ENST00000531616 NAP1L5Q96NT1 182 aaPredicted RBP11.38□□□□□ -0.59
ARHGEF12-211ENST00000531616 ZNF330Q9Y3S2 320 aaPredicted RBP11.38□□□□□ -0.59
ARHGEF12-211ENST00000531616 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.38□□□□□ -0.596e-8■■□□□ 12.3
ARHGEF12-211ENST00000531616 WIZO95785 1651 aa11.38□□□□□ -0.59
ARHGEF12-211ENST00000531616 PPP1R37O75864 691 aa11.38□□□□□ -0.59
ARHGEF12-211ENST00000531616 DDRGK1Q96HY6 314 aa11.38□□□□□ -0.59
ARHGEF12-211ENST00000531616 VGFO15240 615 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF12-211ENST00000531616 CECR2Q9BXF3 1484 aa11.36□□□□□ -0.59
ARHGEF12-211ENST00000531616 DCAF8Q5TAQ9 597 aa11.36□□□□□ -0.59
ARHGEF12-211ENST00000531616 FAM50AQ14320 339 aaKnown RBP11.35□□□□□ -0.59
ARHGEF12-211ENST00000531616 ATP1B4Q9UN42 357 aaPredicted RBP11.35□□□□□ -0.59
ARHGEF12-211ENST00000531616 POM121CA8CG34 1229 aa11.35□□□□□ -0.59
ARHGEF12-211ENST00000531616 SND1Q7KZF4 910 aaKnown RBP eCLIP11.35□□□□□ -0.59
ARHGEF12-211ENST00000531616 SLC52A1Q9NWF4 448 aa11.35□□□□□ -0.59
ARHGEF12-211ENST00000531616 COG6Q9Y2V7 657 aa11.34□□□□□ -0.59
ARHGEF12-211ENST00000531616 VTI1AQ96AJ9 217 aa11.33□□□□□ -0.6
ARHGEF12-211ENST00000531616 RIPOR2Q9Y4F9 1068 aa11.33□□□□□ -0.6
ARHGEF12-211ENST00000531616 FOXD4L6Q3SYB3 417 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF12-211ENST00000531616 FOXD4L3Q6VB84 417 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF12-211ENST00000531616 ANKRD13AQ8IZ07 590 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms