RNA–Protein interactions for RNA: ENST00000530866.5

LTBP3-218, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 3,756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-218ENST00000530866 CDK13Q14004 1512 aaKnown RBP17.16■□□□□ 0.34
LTBP3-218ENST00000530866 WDR97A6NE52 1622 aa17.16■□□□□ 0.34
LTBP3-218ENST00000530866 MYOM3Q5VTT5 1437 aa17.15■□□□□ 0.34
LTBP3-218ENST00000530866 PRDM2Q13029 1718 aa17.12■□□□□ 0.33
LTBP3-218ENST00000530866 FYCO1Q9BQS8 1478 aa17.11■□□□□ 0.33
LTBP3-218ENST00000530866 PTPRKQ15262 1439 aa17.11■□□□□ 0.33
LTBP3-218ENST00000530866 NUP155O75694 1391 aa17.11■□□□□ 0.33
LTBP3-218ENST00000530866 KIF21AQ7Z4S6 1674 aa17.1■□□□□ 0.33
LTBP3-218ENST00000530866 PTPRGP23470 1445 aa17.09■□□□□ 0.33
LTBP3-218ENST00000530866 CCDC184Q52MB2 194 aa17.09■□□□□ 0.33
LTBP3-218ENST00000530866 PRG4Q92954 1404 aaPredicted RBP17.08■□□□□ 0.33
LTBP3-218ENST00000530866 GLIPR1L2Q4G1C9 344 aa17.08■□□□□ 0.32
LTBP3-218ENST00000530866 TIMELESSQ9UNS1 1208 aa17.08■□□□□ 0.32
LTBP3-218ENST00000530866 CCER2I3L3R5 266 aa17.05■□□□□ 0.32
LTBP3-218ENST00000530866 NBPF8Q3BBV2 869 aa17.05■□□□□ 0.32
LTBP3-218ENST00000530866 DAXXQ9UER7 740 aaPredicted RBP17.04■□□□□ 0.32
LTBP3-218ENST00000530866 UACAQ9BZF9 1416 aa17.03■□□□□ 0.32
LTBP3-218ENST00000530866 WASHC2AQ641Q2 1341 aa17.03■□□□□ 0.32
LTBP3-218ENST00000530866 CC2D1BQ5T0F9 858 aaKnown RBP17.03■□□□□ 0.32
LTBP3-218ENST00000530866 NAIPQ13075 1403 aa17.03■□□□□ 0.32
LTBP3-218ENST00000530866 PLPPR3Q6T4P5 718 aa17.02■□□□□ 0.32
LTBP3-218ENST00000530866 CUL7Q14999 1698 aa17.02■□□□□ 0.32
LTBP3-218ENST00000530866 EFCAB5A4FU69 1503 aa17.01■□□□□ 0.31
LTBP3-218ENST00000530866 MAPKBP1O60336 1514 aa17.01■□□□□ 0.31
LTBP3-218ENST00000530866 C11orf95C9JLR9 678 aaPredicted RBP17■□□□□ 0.31
LTBP3-218ENST00000530866 ANP32AP39687 249 aaKnown RBP17■□□□□ 0.31
LTBP3-218ENST00000530866 PLB1Q6P1J6 1458 aa16.99■□□□□ 0.31
LTBP3-218ENST00000530866 KIAA0586Q9BVV6 1533 aa16.99■□□□□ 0.31
LTBP3-218ENST00000530866 GRIN2AQ12879 1464 aa16.98■□□□□ 0.31
LTBP3-218ENST00000530866 ST20-MTHFSA0A0A6YYL1 179 aa16.97■□□□□ 0.31
LTBP3-218ENST00000530866 IL27Q8NEV9 243 aa16.97■□□□□ 0.31
LTBP3-218ENST00000530866 EPRSP07814 1512 aaKnown RBP16.97■□□□□ 0.31
LTBP3-218ENST00000530866 PKNOX2Q96KN3 472 aa16.96■□□□□ 0.31
LTBP3-218ENST00000530866 HFM1A2PYH4 1435 aa16.96■□□□□ 0.31
LTBP3-218ENST00000530866 IQGAP2Q13576 1575 aa16.96■□□□□ 0.31
LTBP3-218ENST00000530866 OSCARQ8IYS5 282 aa16.94■□□□□ 0.3
LTBP3-218ENST00000530866 ZBTB47Q9UFB7 747 aaPredicted RBP16.94■□□□□ 0.3
LTBP3-218ENST00000530866 SYNJ2O15056 1496 aa16.94■□□□□ 0.3
LTBP3-218ENST00000530866 ANKRD30AQ9BXX3 1397 aa16.94■□□□□ 0.3
LTBP3-218ENST00000530866 ARXQ96QS3 562 aa16.93■□□□□ 0.3
LTBP3-218ENST00000530866 PPP4R2Q9NY27 417 aa16.93■□□□□ 0.3
LTBP3-218ENST00000530866 PRKRIP1Q9H875 184 aaPredicted RBP16.92■□□□□ 0.3
LTBP3-218ENST00000530866 TNNT2P45379 298 aaPredicted RBP16.91■□□□□ 0.3
LTBP3-218ENST00000530866 MAGI1Q96QZ7 1491 aaPredicted RBP16.9■□□□□ 0.3
LTBP3-218ENST00000530866 NUTM2DQ5VT03 806 aaPredicted RBP16.9■□□□□ 0.3
LTBP3-218ENST00000530866 THOC2Q8NI27 1593 aaKnown RBP16.89■□□□□ 0.29
LTBP3-218ENST00000530866 LAS1LQ9Y4W2 734 aaKnown RBP16.89■□□□□ 0.29
LTBP3-218ENST00000530866 KIF7Q2M1P5 1343 aa16.89■□□□□ 0.29
LTBP3-218ENST00000530866 EFCAB2Q5VUJ9 269 aa16.88■□□□□ 0.29
LTBP3-218ENST00000530866 VSIG10Q8N0Z9 540 aa16.88■□□□□ 0.29
LTBP3-218ENST00000530866 GGT6Q6P531 493 aa16.88■□□□□ 0.29
LTBP3-218ENST00000530866 PODXL2Q9NZ53 605 aa16.88■□□□□ 0.29
LTBP3-218ENST00000530866 CYB5RLQ6IPT4 315 aa16.87■□□□□ 0.29
LTBP3-218ENST00000530866 NOP58Q9Y2X3 529 aaKnown RBP16.87■□□□□ 0.29
LTBP3-218ENST00000530866 AFAP1Q8N556 730 aa16.86■□□□□ 0.29
LTBP3-218ENST00000530866 SAFB2Q14151 953 aaKnown RBP eCLIP16.86■□□□□ 0.29
LTBP3-218ENST00000530866 WDR62O43379 1518 aa16.85■□□□□ 0.29
LTBP3-218ENST00000530866 ROCK2O75116 1388 aaKnown RBP16.85■□□□□ 0.29
LTBP3-218ENST00000530866 EHBP1L1Q8N3D4 1523 aa16.85■□□□□ 0.29
LTBP3-218ENST00000530866 CANXP27824 592 aaKnown RBP16.84■□□□□ 0.29
LTBP3-218ENST00000530866 A0A0U1RQG5 324 aaPredicted RBP16.84■□□□□ 0.29
LTBP3-218ENST00000530866 KIF3BO15066 747 aa16.84■□□□□ 0.29
LTBP3-218ENST00000530866 NEFMP07197 916 aa16.84■□□□□ 0.29
LTBP3-218ENST00000530866 NEUROD2Q15784 382 aa16.84■□□□□ 0.29
LTBP3-218ENST00000530866 SUPT6HQ7KZ85 1726 aaKnown RBP16.84■□□□□ 0.29
LTBP3-218ENST00000530866 MSH5O43196 834 aa16.84■□□□□ 0.29
LTBP3-218ENST00000530866 NBPF1Q3BBV0 1214 aa16.84■□□□□ 0.29
LTBP3-218ENST00000530866 PTPN23Q9H3S7 1636 aa16.84■□□□□ 0.29
LTBP3-218ENST00000530866 USP47Q96K76 1375 aa16.83■□□□□ 0.29
LTBP3-218ENST00000530866 ANKRD50Q9ULJ7 1429 aa16.83■□□□□ 0.28
LTBP3-218ENST00000530866 KIF15Q9NS87 1388 aa16.82■□□□□ 0.28
LTBP3-218ENST00000530866 MAP3K1Q13233 1512 aa16.82■□□□□ 0.28
LTBP3-218ENST00000530866 DAPK1P53355 1430 aa16.82■□□□□ 0.28
LTBP3-218ENST00000530866 ABCA5Q8WWZ7 1642 aa16.82■□□□□ 0.28
LTBP3-218ENST00000530866 ARID4BQ4LE39 1312 aaPredicted RBP16.81■□□□□ 0.28
LTBP3-218ENST00000530866 PLEKHG5O94827 1062 aa16.8■□□□□ 0.28
LTBP3-218ENST00000530866 ABCC5O15440 1437 aa16.8■□□□□ 0.28
LTBP3-218ENST00000530866 EIF4G3O43432 1585 aaKnown RBP16.8■□□□□ 0.28
LTBP3-218ENST00000530866 TARBP1Q13395 1621 aaKnown RBP16.8■□□□□ 0.28
LTBP3-218ENST00000530866 CCDC7Q96M83 1385 aa16.8■□□□□ 0.28
LTBP3-218ENST00000530866 ARHGEF11O15085 1522 aa16.8■□□□□ 0.28
LTBP3-218ENST00000530866 ADAMTS12P58397 1594 aa16.8■□□□□ 0.28
LTBP3-218ENST00000530866 MAGI3Q5TCQ9 1506 aa16.79■□□□□ 0.28
LTBP3-218ENST00000530866 PLIN1O60240 522 aa16.79■□□□□ 0.28
LTBP3-218ENST00000530866 ERICH6BQ5W0A0 696 aa16.78■□□□□ 0.28
LTBP3-218ENST00000530866 UBE2Q2Q8WVN8 375 aa16.78■□□□□ 0.28
LTBP3-218ENST00000530866 WDR43Q15061 677 aaKnown RBP eCLIP16.78■□□□□ 0.28
LTBP3-218ENST00000530866 TROQ12816 1431 aaPredicted RBP16.77■□□□□ 0.28
LTBP3-218ENST00000530866 HECW1Q76N89 1606 aa16.77■□□□□ 0.28
LTBP3-218ENST00000530866 CTTNBP2Q8WZ74 1663 aa16.77■□□□□ 0.28
LTBP3-218ENST00000530866 STAG3Q9UJ98 1225 aa16.76■□□□□ 0.27
LTBP3-218ENST00000530866 SPAG9O60271 1321 aaKnown RBP16.74■□□□□ 0.27
LTBP3-218ENST00000530866 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.74■□□□□ 0.27
LTBP3-218ENST00000530866 KNSTRNQ9Y448 316 aa16.74■□□□□ 0.27
LTBP3-218ENST00000530866 RGS3P49796 1198 aa16.74■□□□□ 0.27
LTBP3-218ENST00000530866 MLECQ14165 292 aa16.74■□□□□ 0.27
LTBP3-218ENST00000530866 ESF1Q9H501 851 aaKnown RBP16.73■□□□□ 0.27
LTBP3-218ENST00000530866 NUP153P49790 1475 aaKnown RBP16.73■□□□□ 0.27
LTBP3-218ENST00000530866 MIA2Q96PC5 1412 aa16.73■□□□□ 0.27
LTBP3-218ENST00000530866 ANKRD30BQ9BXX2 1392 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms