RNA–Protein interactions for RNA: ENST00000530788.1

MSANTD4-204, Transcript of Myb/SANT DNA binding domain containing 4 with coiled-coils, humanhuman

TSL 1 (best)

Gene MSANTD4, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD4-204ENST00000530788 PTPRTO14522 1441 aa24.87■■□□□ 1.57
MSANTD4-204ENST00000530788 ARHGEF12Q9NZN5 1544 aa24.87■■□□□ 1.57
MSANTD4-204ENST00000530788 IQSEC2Q5JU85 1478 aa24.87■■□□□ 1.57
MSANTD4-204ENST00000530788 CFAP74Q9C0B2 1584 aa24.86■■□□□ 1.57
MSANTD4-204ENST00000530788 MAGI2Q86UL8 1455 aa24.86■■□□□ 1.57
MSANTD4-204ENST00000530788 UHRF1BP1Q6BDS2 1440 aa24.86■■□□□ 1.57
MSANTD4-204ENST00000530788 RAPGEF6Q8TEU7 1601 aa24.83■■□□□ 1.57
MSANTD4-204ENST00000530788 HECW1Q76N89 1606 aa24.83■■□□□ 1.56
MSANTD4-204ENST00000530788 SETD1BQ9UPS6 1966 aaKnown RBP24.78■■□□□ 1.56
MSANTD4-204ENST00000530788 ATP10AO60312 1499 aa24.75■■□□□ 1.55
MSANTD4-204ENST00000530788 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.73■■□□□ 1.55
MSANTD4-204ENST00000530788 NUP153P49790 1475 aaKnown RBP24.73■■□□□ 1.55
MSANTD4-204ENST00000530788 C9orf84Q5VXU9 1444 aa24.72■■□□□ 1.55
MSANTD4-204ENST00000530788 PLEKHD1A6NEE1 506 aa24.71■■□□□ 1.55
MSANTD4-204ENST00000530788 UBAP1LF5GYI3 381 aa24.7■■□□□ 1.54
MSANTD4-204ENST00000530788 PRXQ9BXM0 1461 aa24.69■■□□□ 1.54
MSANTD4-204ENST00000530788 SCAPERQ9BY12 1400 aa24.69■■□□□ 1.54
MSANTD4-204ENST00000530788 SAMD9Q5K651 1589 aa24.68■■□□□ 1.54
MSANTD4-204ENST00000530788 NCOA1Q15788 1441 aa24.64■■□□□ 1.54
MSANTD4-204ENST00000530788 MED1Q15648 1581 aaPredicted RBP24.63■■□□□ 1.53
MSANTD4-204ENST00000530788 C3P01024 1663 aa24.62■■□□□ 1.53
MSANTD4-204ENST00000530788 ZNF335Q9H4Z2 1342 aaPredicted RBP24.57■■□□□ 1.52
MSANTD4-204ENST00000530788 PLCH2O75038 1416 aa24.55■■□□□ 1.52
MSANTD4-204ENST00000530788 TRAPPC8Q9Y2L5 1435 aa24.55■■□□□ 1.52
MSANTD4-204ENST00000530788 CAMSAP1Q5T5Y3 1602 aa24.53■■□□□ 1.52
MSANTD4-204ENST00000530788 HSPA1LP34931 641 aa24.51■■□□□ 1.51
MSANTD4-204ENST00000530788 ESF1Q9H501 851 aaKnown RBP24.49■■□□□ 1.51
MSANTD4-204ENST00000530788 NCKAP5LQ9HCH0 1330 aa24.48■■□□□ 1.51
MSANTD4-204ENST00000530788 DIP2CQ9Y2E4 1556 aa24.46■■□□□ 1.51
MSANTD4-204ENST00000530788 ZNF518AQ6AHZ1 1483 aa24.46■■□□□ 1.51
MSANTD4-204ENST00000530788 EFCAB2Q5VUJ9 269 aa24.46■■□□□ 1.51
MSANTD4-204ENST00000530788 SCAF1Q9H7N4 1312 aaKnown RBP24.45■■□□□ 1.5
MSANTD4-204ENST00000530788 MYT1LQ9UL68 1186 aa24.45■■□□□ 1.5
MSANTD4-204ENST00000530788 REREQ9P2R6 1566 aa24.45■■□□□ 1.5
MSANTD4-204ENST00000530788 KDM5CP41229 1560 aa24.43■■□□□ 1.5
MSANTD4-204ENST00000530788 RANGAP1P46060 587 aaPredicted RBP24.43■■□□□ 1.5
MSANTD4-204ENST00000530788 AFAP1Q8N556 730 aa24.43■■□□□ 1.5
MSANTD4-204ENST00000530788 MYO5CQ9NQX4 1742 aa24.42■■□□□ 1.5
MSANTD4-204ENST00000530788 PIP4K2BP78356 416 aa24.41■■□□□ 1.5
MSANTD4-204ENST00000530788 AGLP35573 1532 aa24.4■■□□□ 1.5
MSANTD4-204ENST00000530788 CDK13Q14004 1512 aaKnown RBP24.4■■□□□ 1.5
MSANTD4-204ENST00000530788 ABCA6Q8N139 1617 aa24.39■■□□□ 1.5
MSANTD4-204ENST00000530788 CNTLNQ9NXG0 1405 aa24.37■■□□□ 1.49
MSANTD4-204ENST00000530788 NPATQ14207 1427 aa24.35■■□□□ 1.49
MSANTD4-204ENST00000530788 PKD2Q13563 968 aa24.34■■□□□ 1.49
MSANTD4-204ENST00000530788 TOM1O60784 492 aa24.32■■□□□ 1.48
MSANTD4-204ENST00000530788 PLA2R1Q13018 1463 aa24.32■■□□□ 1.48
MSANTD4-204ENST00000530788 MLH3Q9UHC1 1453 aa24.32■■□□□ 1.48
MSANTD4-204ENST00000530788 ARHGAP5Q13017 1502 aa24.3■■□□□ 1.48
MSANTD4-204ENST00000530788 SUPT6HQ7KZ85 1726 aaKnown RBP24.3■■□□□ 1.48
MSANTD4-204ENST00000530788 TCOF1Q13428 1488 aaKnown RBP24.3■■□□□ 1.48
MSANTD4-204ENST00000530788 PPP6R1Q9UPN7 881 aa24.29■■□□□ 1.48
MSANTD4-204ENST00000530788 MROH2AA6NES4 1674 aa24.29■■□□□ 1.48
MSANTD4-204ENST00000530788 ZNF142P52746 1687 aaPredicted RBP24.27■■□□□ 1.48
MSANTD4-204ENST00000530788 KIF14Q15058 1648 aa24.26■■□□□ 1.47
MSANTD4-204ENST00000530788 MYO3AQ8NEV4 1616 aa24.25■■□□□ 1.47
MSANTD4-204ENST00000530788 ZMYM3Q14202 1370 aa24.25■■□□□ 1.47
MSANTD4-204ENST00000530788 CEP170BQ9Y4F5 1589 aaPredicted RBP24.23■■□□□ 1.47
MSANTD4-204ENST00000530788 CSRNP3Q8WYN3 585 aa24.21■■□□□ 1.47
MSANTD4-204ENST00000530788 CPS1P31327 1500 aa24.2■■□□□ 1.47
MSANTD4-204ENST00000530788 KIDINS220Q9ULH0 1771 aa24.19■■□□□ 1.46
MSANTD4-204ENST00000530788 ATP1B4Q9UN42 357 aaPredicted RBP24.16■■□□□ 1.46
MSANTD4-204ENST00000530788 CDK11AQ9UQ88 783 aaPredicted RBP24.16■■□□□ 1.46
MSANTD4-204ENST00000530788 CDC42BPBQ9Y5S2 1711 aa24.15■■□□□ 1.46
MSANTD4-204ENST00000530788 CLTCQ00610 1675 aaKnown RBP24.15■■□□□ 1.46
MSANTD4-204ENST00000530788 SHANK2Q9UPX8 1470 aa24.14■■□□□ 1.46
MSANTD4-204ENST00000530788 PTPRKQ15262 1439 aa24.14■■□□□ 1.45
MSANTD4-204ENST00000530788 ABCC1P33527 1531 aa24.14■■□□□ 1.45
MSANTD4-204ENST00000530788 ALKQ9UM73 1620 aa24.13■■□□□ 1.45
MSANTD4-204ENST00000530788 RGS17Q9UGC6 210 aaPredicted RBP24.13■■□□□ 1.45
MSANTD4-204ENST00000530788 ITSN2Q9NZM3 1697 aa24.13■■□□□ 1.45
MSANTD4-204ENST00000530788 TROQ12816 1431 aaPredicted RBP24.11■■□□□ 1.45
MSANTD4-204ENST00000530788 POLR1AO95602 1720 aaPredicted RBP24.08■■□□□ 1.45
MSANTD4-204ENST00000530788 CLIP1P30622 1438 aa24.07■■□□□ 1.44
MSANTD4-204ENST00000530788 DNMT1P26358 1616 aaKnown RBP24.06■■□□□ 1.44
MSANTD4-204ENST00000530788 NEURL4Q96JN8 1562 aa24.06■■□□□ 1.44
MSANTD4-204ENST00000530788 PREX2Q70Z35 1606 aa24.06■■□□□ 1.44
MSANTD4-204ENST00000530788 A2ML1A8K2U0 1454 aa24.05■■□□□ 1.44
MSANTD4-204ENST00000530788 VWDEQ8N2E2 1590 aa24.02■■□□□ 1.44
MSANTD4-204ENST00000530788 SAMD9LQ8IVG5 1584 aa24.01■■□□□ 1.43
MSANTD4-204ENST00000530788 FMN1Q68DA7 1419 aa24■■□□□ 1.43
MSANTD4-204ENST00000530788 GGT6Q6P531 493 aa23.97■■□□□ 1.43
MSANTD4-204ENST00000530788 SPAG9O60271 1321 aaKnown RBP23.95■■□□□ 1.42
MSANTD4-204ENST00000530788 PLXNC1O60486 1568 aa23.95■■□□□ 1.42
MSANTD4-204ENST00000530788 POTEAQ6S8J7 498 aa23.94■■□□□ 1.42
MSANTD4-204ENST00000530788 LRRIQ1Q96JM4 1722 aa23.93■■□□□ 1.42
MSANTD4-204ENST00000530788 FOXD1Q16676 465 aa23.91■■□□□ 1.42
MSANTD4-204ENST00000530788 ANKLE2Q86XL3 938 aa23.91■■□□□ 1.42
MSANTD4-204ENST00000530788 A2MP01023 1474 aa23.91■■□□□ 1.42
MSANTD4-204ENST00000530788 RNF17Q9BXT8 1623 aaKnown RBP23.91■■□□□ 1.42
MSANTD4-204ENST00000530788 CDC42BPAQ5VT25 1732 aa23.9■■□□□ 1.42
MSANTD4-204ENST00000530788 ATP7AQ04656 1500 aa23.89■■□□□ 1.42
MSANTD4-204ENST00000530788 LRRC7Q96NW7 1537 aa23.89■■□□□ 1.41
MSANTD4-204ENST00000530788 ZNF777Q9ULD5 760 aaPredicted RBP23.88■■□□□ 1.41
MSANTD4-204ENST00000530788 SYCP2Q9BX26 1530 aa23.88■■□□□ 1.41
MSANTD4-204ENST00000530788 NPHP4O75161 1426 aaPredicted RBP23.87■■□□□ 1.41
MSANTD4-204ENST00000530788 STRCP1A6NGW2 1772 aa23.87■■□□□ 1.41
MSANTD4-204ENST00000530788 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.87■■□□□ 1.41
MSANTD4-204ENST00000530788 EEA1Q15075 1411 aa23.86■■□□□ 1.41
MSANTD4-204ENST00000530788 SETD1AO15047 1707 aaKnown RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms