RNA–Protein interactions for RNA: ENST00000530749.5

RDX-211, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 2,558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-211ENST00000530749 ABCC5O15440 1437 aa31.12■■■□□ 2.57
RDX-211ENST00000530749 DNMT1P26358 1616 aaKnown RBP31.1■■■□□ 2.57
RDX-211ENST00000530749 CFDP1Q9UEE9 299 aaPredicted RBP31.05■■■□□ 2.56
RDX-211ENST00000530749 ZNF777Q9ULD5 760 aaPredicted RBP31.05■■■□□ 2.56
RDX-211ENST00000530749 FOXD1Q16676 465 aa31.05■■■□□ 2.56
RDX-211ENST00000530749 ABCA8O94911 1581 aa31.03■■■□□ 2.56
RDX-211ENST00000530749 GPATCH8Q9UKJ3 1502 aaKnown RBP31.03■■■□□ 2.56
RDX-211ENST00000530749 CAMSAP2Q08AD1 1489 aa31.02■■■□□ 2.56
RDX-211ENST00000530749 DDX10Q13206 875 aaKnown RBP31.02■■■□□ 2.56
RDX-211ENST00000530749 MPHOSPH9Q99550 1183 aa31.01■■■□□ 2.55
RDX-211ENST00000530749 CHD1O14646 1710 aa31.01■■■□□ 2.55
RDX-211ENST00000530749 ADCY10Q96PN6 1610 aa30.99■■■□□ 2.55
RDX-211ENST00000530749 KDM5BQ9UGL1 1544 aa30.99■■■□□ 2.55
RDX-211ENST00000530749 ATP10BO94823 1461 aa30.98■■■□□ 2.55
RDX-211ENST00000530749 ROCK1Q13464 1354 aa30.98■■■□□ 2.55
RDX-211ENST00000530749 ITSN2Q9NZM3 1697 aa30.98■■■□□ 2.55
RDX-211ENST00000530749 PLEKHD1A6NEE1 506 aa30.94■■■□□ 2.54
RDX-211ENST00000530749 KCNH8Q96L42 1107 aa30.91■■■□□ 2.54
RDX-211ENST00000530749 PTPRGP23470 1445 aa30.9■■■□□ 2.54
RDX-211ENST00000530749 CDC42BPAQ5VT25 1732 aa30.88■■■□□ 2.53
RDX-211ENST00000530749 ABCC10Q5T3U5 1492 aa30.85■■■□□ 2.53
RDX-211ENST00000530749 NCOA1Q15788 1441 aa30.83■■■□□ 2.53
RDX-211ENST00000530749 CROCC2H7BZ55 1655 aa30.82■■■□□ 2.52
RDX-211ENST00000530749 SLC4A1APQ9BWU0 796 aaKnown RBP30.81■■■□□ 2.52
RDX-211ENST00000530749 ADGBQ8N7X0 1667 aa30.81■■■□□ 2.52
RDX-211ENST00000530749 ERCC6L2Q5T890 1561 aa30.78■■■□□ 2.52
RDX-211ENST00000530749 L3MBTL2Q969R5 705 aa30.78■■■□□ 2.52
RDX-211ENST00000530749 ANKRD30BQ9BXX2 1392 aa30.78■■■□□ 2.52
RDX-211ENST00000530749 ADGRL2O95490 1459 aa30.73■■■□□ 2.51
RDX-211ENST00000530749 PZPP20742 1482 aa30.73■■■□□ 2.51
RDX-211ENST00000530749 SHROOM2Q13796 1616 aa30.72■■■□□ 2.51
RDX-211ENST00000530749 ANKRD30AQ9BXX3 1397 aa30.7■■■□□ 2.5
RDX-211ENST00000530749 HNRNPMP52272 730 aaKnown RBP eCLIP30.69■■■□□ 2.5
RDX-211ENST00000530749 RPRD2Q5VT52 1461 aaKnown RBP30.69■■■□□ 2.5
RDX-211ENST00000530749 HSPA5P11021 654 aaKnown RBP30.66■■■□□ 2.5
RDX-211ENST00000530749 C9orf84Q5VXU9 1444 aa30.66■■■□□ 2.5
RDX-211ENST00000530749 ANKRD50Q9ULJ7 1429 aa30.64■■■□□ 2.5
RDX-211ENST00000530749 TEX14Q8IWB6 1497 aa30.63■■■□□ 2.49
RDX-211ENST00000530749 CDC42BPBQ9Y5S2 1711 aa30.62■■■□□ 2.49
RDX-211ENST00000530749 NBPF8Q3BBV2 869 aa30.61■■■□□ 2.49
RDX-211ENST00000530749 SAMD9LQ8IVG5 1584 aa30.59■■■□□ 2.49
RDX-211ENST00000530749 TSPY4P0CV99 314 aa30.58■■■□□ 2.49
RDX-211ENST00000530749 TSPY10P0CW01 314 aa30.58■■■□□ 2.49
RDX-211ENST00000530749 PKD2Q13563 968 aa30.58■■■□□ 2.49
RDX-211ENST00000530749 SHANK2Q9UPX8 1470 aa30.58■■■□□ 2.49
RDX-211ENST00000530749 ANP32CO43423 234 aa30.57■■■□□ 2.48
RDX-211ENST00000530749 MBD5Q9P267 1494 aa30.56■■■□□ 2.48
RDX-211ENST00000530749 PREX2Q70Z35 1606 aa30.56■■■□□ 2.48
RDX-211ENST00000530749 TTC37Q6PGP7 1564 aa30.56■■■□□ 2.48
RDX-211ENST00000530749 WASHC2AQ641Q2 1341 aa30.55■■■□□ 2.48
RDX-211ENST00000530749 EIF4G2P78344 907 aaKnown RBP eCLIP30.55■■■□□ 2.481e-35■■■■■ 36.1
RDX-211ENST00000530749 KIAA1107Q9UPP5 1409 aa30.54■■■□□ 2.48
RDX-211ENST00000530749 ABCC2Q92887 1545 aa30.53■■■□□ 2.48
RDX-211ENST00000530749 NUP155O75694 1391 aa30.51■■■□□ 2.48
RDX-211ENST00000530749 KIF15Q9NS87 1388 aa30.51■■■□□ 2.48
RDX-211ENST00000530749 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.51■■■□□ 2.47
RDX-211ENST00000530749 ARHGEF5Q12774 1597 aa30.5■■■□□ 2.47
RDX-211ENST00000530749 CLASP1Q7Z460 1538 aa30.48■■■□□ 2.47
RDX-211ENST00000530749 ARHGAP5Q13017 1502 aa30.47■■■□□ 2.47
RDX-211ENST00000530749 CCDC141Q6ZP82 1450 aa30.47■■■□□ 2.47
RDX-211ENST00000530749 SYCP2Q9BX26 1530 aa30.46■■■□□ 2.47
RDX-211ENST00000530749 C11orf95C9JLR9 678 aaPredicted RBP30.46■■■□□ 2.47
RDX-211ENST00000530749 ZNF326Q5BKZ1 582 aaKnown RBP30.42■■■□□ 2.46
RDX-211ENST00000530749 CCER2I3L3R5 266 aa30.41■■■□□ 2.46
RDX-211ENST00000530749 ZCCHC11Q5TAX3 1644 aaKnown RBP30.38■■■□□ 2.45
RDX-211ENST00000530749 MYO5CQ9NQX4 1742 aa30.37■■■□□ 2.45
RDX-211ENST00000530749 KDM5DQ9BY66 1539 aa30.34■■■□□ 2.45
RDX-211ENST00000530749 SPATA31E1Q6ZUB1 1445 aa30.32■■■□□ 2.44
RDX-211ENST00000530749 CCDC7Q96M83 1385 aa30.31■■■□□ 2.44
RDX-211ENST00000530749 RSPH4AQ5TD94 716 aa30.3■■■□□ 2.44
RDX-211ENST00000530749 ARHGEF12Q9NZN5 1544 aa30.3■■■□□ 2.44
RDX-211ENST00000530749 CNTLNQ9NXG0 1405 aa30.27■■■□□ 2.44
RDX-211ENST00000530749 FAM135AQ9P2D6 1515 aa30.27■■■□□ 2.44
RDX-211ENST00000530749 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.25■■■□□ 2.436e-8■■■□□ 16.9
RDX-211ENST00000530749 UHRF1BP1LA0JNW5 1464 aa30.25■■■□□ 2.43
RDX-211ENST00000530749 SUPT16HQ9Y5B9 1047 aaKnown RBP30.24■■■□□ 2.43
RDX-211ENST00000530749 KIF7Q2M1P5 1343 aa30.24■■■□□ 2.43
RDX-211ENST00000530749 MAST1Q9Y2H9 1570 aa30.23■■■□□ 2.43
RDX-211ENST00000530749 PLCH2O75038 1416 aa30.22■■■□□ 2.43
RDX-211ENST00000530749 KDM2AQ9Y2K7 1162 aa30.22■■■□□ 2.43
RDX-211ENST00000530749 PLEKHH2Q8IVE3 1493 aa30.2■■■□□ 2.42
RDX-211ENST00000530749 USP47Q96K76 1375 aa30.19■■■□□ 2.42
RDX-211ENST00000530749 EFCAB2Q5VUJ9 269 aa30.16■■■□□ 2.42
RDX-211ENST00000530749 POLR1AO95602 1720 aaPredicted RBP30.16■■■□□ 2.42
RDX-211ENST00000530749 CCDC184Q52MB2 194 aa30.15■■■□□ 2.42
RDX-211ENST00000530749 BCORL1Q5H9F3 1711 aa30.15■■■□□ 2.42
RDX-211ENST00000530749 PLXNC1O60486 1568 aa30.15■■■□□ 2.42
RDX-211ENST00000530749 DCAF11Q8TEB1 546 aa30.15■■■□□ 2.42
RDX-211ENST00000530749 TRAPPC8Q9Y2L5 1435 aa30.14■■■□□ 2.42
RDX-211ENST00000530749 UNC13BO14795 1591 aa30.14■■■□□ 2.42
RDX-211ENST00000530749 POLR3GLQ9BT43 218 aa30.13■■■□□ 2.41
RDX-211ENST00000530749 KDM5CP41229 1560 aa30.12■■■□□ 2.41
RDX-211ENST00000530749 UHRF1BP1Q6BDS2 1440 aa30.12■■■□□ 2.41
RDX-211ENST00000530749 ABCC1P33527 1531 aa30.12■■■□□ 2.41
RDX-211ENST00000530749 RALGAPBQ86X10 1494 aa30.09■■■□□ 2.41
RDX-211ENST00000530749 PRKRIP1Q9H875 184 aaPredicted RBP30.09■■■□□ 2.41
RDX-211ENST00000530749 PLA2R1Q13018 1463 aa30.08■■■□□ 2.41
RDX-211ENST00000530749 CARD11Q9BXL7 1154 aa30.08■■■□□ 2.41
RDX-211ENST00000530749 DUOX2Q9NRD8 1548 aa30.07■■■□□ 2.4
RDX-211ENST00000530749 RGL3Q3MIN7 710 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms