RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 YEATS2Q9ULM3 1422 aa34.21■■■■□ 3.07
TSPAN4-219ENST00000530404 SCAPERQ9BY12 1400 aa34.18■■■■□ 3.06
TSPAN4-219ENST00000530404 POGZQ7Z3K3 1410 aa34.15■■■■□ 3.06
TSPAN4-219ENST00000530404 FER1L4A9Z1Z3 1794 aa34.13■■■■□ 3.05
TSPAN4-219ENST00000530404 PCF11O94913 1555 aaKnown RBP34.13■■■■□ 3.05
TSPAN4-219ENST00000530404 TROQ12816 1431 aaPredicted RBP34.12■■■■□ 3.05
TSPAN4-219ENST00000530404 CDC42BPBQ9Y5S2 1711 aa34.11■■■■□ 3.05
TSPAN4-219ENST00000530404 CDK11AQ9UQ88 783 aaPredicted RBP34.11■■■■□ 3.05
TSPAN4-219ENST00000530404 MAGI2Q86UL8 1455 aa34.1■■■■□ 3.05
TSPAN4-219ENST00000530404 PLPPR3Q6T4P5 718 aa34.08■■■■□ 3.05
TSPAN4-219ENST00000530404 ARHGAP5Q13017 1502 aa34.08■■■■□ 3.05
TSPAN4-219ENST00000530404 EFCAB2Q5VUJ9 269 aa34.05■■■■□ 3.04
TSPAN4-219ENST00000530404 CLIP1P30622 1438 aa34.04■■■■□ 3.04
TSPAN4-219ENST00000530404 LMTK3Q96Q04 1460 aa34.04■■■■□ 3.04
TSPAN4-219ENST00000530404 MLECQ14165 292 aa34.04■■■■□ 3.04
TSPAN4-219ENST00000530404 PREX2Q70Z35 1606 aa33.99■■■■□ 3.03
TSPAN4-219ENST00000530404 CASKIN1Q8WXD9 1431 aa33.97■■■■□ 3.03
TSPAN4-219ENST00000530404 ATP10AO60312 1499 aa33.97■■■■□ 3.03
TSPAN4-219ENST00000530404 CDC42BPAQ5VT25 1732 aa33.96■■■■□ 3.03
TSPAN4-219ENST00000530404 C9orf84Q5VXU9 1444 aa33.96■■■■□ 3.03
TSPAN4-219ENST00000530404 CCDC18Q5T9S5 1454 aa33.95■■■■□ 3.03
TSPAN4-219ENST00000530404 KDM5CP41229 1560 aa33.95■■■■□ 3.03
TSPAN4-219ENST00000530404 ZNF518AQ6AHZ1 1483 aa33.95■■■■□ 3.02
TSPAN4-219ENST00000530404 ITSN2Q9NZM3 1697 aa33.93■■■■□ 3.02
TSPAN4-219ENST00000530404 ARHGEF12Q9NZN5 1544 aa33.9■■■■□ 3.02
TSPAN4-219ENST00000530404 AFAP1Q8N556 730 aa33.9■■■■□ 3.02
TSPAN4-219ENST00000530404 DIP2CQ9Y2E4 1556 aa33.89■■■■□ 3.02
TSPAN4-219ENST00000530404 ABCA6Q8N139 1617 aa33.88■■■■□ 3.01
TSPAN4-219ENST00000530404 HSPA2P54652 639 aa33.87■■■■□ 3.01
TSPAN4-219ENST00000530404 ABCC1P33527 1531 aa33.87■■■■□ 3.01
TSPAN4-219ENST00000530404 MYT1LQ9UL68 1186 aa33.86■■■■□ 3.01
TSPAN4-219ENST00000530404 FYCO1Q9BQS8 1478 aa33.86■■■■□ 3.01
TSPAN4-219ENST00000530404 PREX1Q8TCU6 1659 aa33.8■■■■□ 3
TSPAN4-219ENST00000530404 TRAPPC8Q9Y2L5 1435 aa33.79■■■■□ 3
TSPAN4-219ENST00000530404 KIDINS220Q9ULH0 1771 aa33.78■■■■□ 3
TSPAN4-219ENST00000530404 REREQ9P2R6 1566 aa33.76■■■□□ 2.99
TSPAN4-219ENST00000530404 MLH3Q9UHC1 1453 aa33.75■■■□□ 2.99
TSPAN4-219ENST00000530404 CEBPAP49715 358 aaPredicted RBP33.74■■■□□ 2.99
TSPAN4-219ENST00000530404 SAMD9LQ8IVG5 1584 aa33.73■■■□□ 2.99
TSPAN4-219ENST00000530404 C3P01024 1663 aa33.71■■■□□ 2.99
TSPAN4-219ENST00000530404 FBXO41Q8TF61 875 aa33.7■■■□□ 2.99
TSPAN4-219ENST00000530404 SETD1BQ9UPS6 1966 aaKnown RBP33.69■■■□□ 2.98
TSPAN4-219ENST00000530404 ZNF777Q9ULD5 760 aaPredicted RBP33.67■■■□□ 2.98
TSPAN4-219ENST00000530404 SYCP2Q9BX26 1530 aa33.67■■■□□ 2.98
TSPAN4-219ENST00000530404 GPATCH8Q9UKJ3 1502 aaKnown RBP33.64■■■□□ 2.98
TSPAN4-219ENST00000530404 AGLP35573 1532 aa33.63■■■□□ 2.97
TSPAN4-219ENST00000530404 SUPT6HQ7KZ85 1726 aaKnown RBP33.62■■■□□ 2.97
TSPAN4-219ENST00000530404 STRCQ7RTU9 1775 aa33.6■■■□□ 2.97
TSPAN4-219ENST00000530404 HNRNPMP52272 730 aaKnown RBP eCLIP33.55■■■□□ 2.96
TSPAN4-219ENST00000530404 UHRF1BP1Q6BDS2 1440 aa33.53■■■□□ 2.96
TSPAN4-219ENST00000530404 MTUS2Q5JR59 1369 aa33.52■■■□□ 2.96
TSPAN4-219ENST00000530404 INO80Q9ULG1 1556 aaPredicted RBP33.51■■■□□ 2.95
TSPAN4-219ENST00000530404 CCNB3Q8WWL7 1395 aa33.5■■■□□ 2.95
TSPAN4-219ENST00000530404 ATP7AQ04656 1500 aa33.5■■■□□ 2.95
TSPAN4-219ENST00000530404 TIAM1Q13009 1591 aa33.49■■■□□ 2.95
TSPAN4-219ENST00000530404 ESF1Q9H501 851 aaKnown RBP33.49■■■□□ 2.95
TSPAN4-219ENST00000530404 SPAG9O60271 1321 aaKnown RBP33.49■■■□□ 2.95
TSPAN4-219ENST00000530404 CFDP1Q9UEE9 299 aaPredicted RBP33.48■■■□□ 2.95
TSPAN4-219ENST00000530404 MROH2AA6NES4 1674 aa33.46■■■□□ 2.95
TSPAN4-219ENST00000530404 EHBP1L1Q8N3D4 1523 aa33.46■■■□□ 2.95
TSPAN4-219ENST00000530404 CLTCQ00610 1675 aaKnown RBP33.45■■■□□ 2.94
TSPAN4-219ENST00000530404 CEP162Q5TB80 1403 aa33.45■■■□□ 2.94
TSPAN4-219ENST00000530404 PLEKHH2Q8IVE3 1493 aa33.44■■■□□ 2.94
TSPAN4-219ENST00000530404 KIAA1107Q9UPP5 1409 aa33.44■■■□□ 2.94
TSPAN4-219ENST00000530404 PLXNC1O60486 1568 aa33.41■■■□□ 2.94
TSPAN4-219ENST00000530404 CERKQ8TCT0 537 aa33.4■■■□□ 2.94
TSPAN4-219ENST00000530404 ADGBQ8N7X0 1667 aa33.39■■■□□ 2.94
TSPAN4-219ENST00000530404 CNTLNQ9NXG0 1405 aa33.39■■■□□ 2.94
TSPAN4-219ENST00000530404 ZNF644Q9H582 1327 aaPredicted RBP33.37■■■□□ 2.93
TSPAN4-219ENST00000530404 A2MP01023 1474 aa33.36■■■□□ 2.93
TSPAN4-219ENST00000530404 ZMYM3Q14202 1370 aa33.28■■■□□ 2.92
TSPAN4-219ENST00000530404 MBD5Q9P267 1494 aa33.28■■■□□ 2.92
TSPAN4-219ENST00000530404 DMRT2Q9Y5R5 561 aa33.27■■■□□ 2.92
TSPAN4-219ENST00000530404 MYO3AQ8NEV4 1616 aa33.25■■■□□ 2.91
TSPAN4-219ENST00000530404 GGT6Q6P531 493 aa33.24■■■□□ 2.91
TSPAN4-219ENST00000530404 CAMSAP1Q5T5Y3 1602 aa33.24■■■□□ 2.91
TSPAN4-219ENST00000530404 NPATQ14207 1427 aa33.23■■■□□ 2.91
TSPAN4-219ENST00000530404 NCOA2Q15596 1464 aa33.23■■■□□ 2.91
TSPAN4-219ENST00000530404 ZNF142P52746 1687 aaPredicted RBP33.22■■■□□ 2.91
TSPAN4-219ENST00000530404 PTPRTO14522 1441 aa33.21■■■□□ 2.91
TSPAN4-219ENST00000530404 NCOA1Q15788 1441 aa33.2■■■□□ 2.91
TSPAN4-219ENST00000530404 CAMSAP2Q08AD1 1489 aa33.19■■■□□ 2.9
TSPAN4-219ENST00000530404 LOC105371045A0A1W2PR82 267 aa33.15■■■□□ 2.9
TSPAN4-219ENST00000530404 RTEL1-TNFRSF6BF6WH68 1400 aa33.15■■■□□ 2.9
TSPAN4-219ENST00000530404 CCDC141Q6ZP82 1450 aa33.14■■■□□ 2.9
TSPAN4-219ENST00000530404 PTPRKQ15262 1439 aa33.14■■■□□ 2.9
TSPAN4-219ENST00000530404 CEP170BQ9Y4F5 1589 aaPredicted RBP33.13■■■□□ 2.89
TSPAN4-219ENST00000530404 LTBP4Q8N2S1 1624 aa33.11■■■□□ 2.89
TSPAN4-219ENST00000530404 DHX29Q7Z478 1369 aaKnown RBP33.09■■■□□ 2.89
TSPAN4-219ENST00000530404 VPS8Q8N3P4 1428 aa33.08■■■□□ 2.89
TSPAN4-219ENST00000530404 NCKAP5LQ9HCH0 1330 aa33.06■■■□□ 2.88
TSPAN4-219ENST00000530404 ARHGEF5Q12774 1597 aa33.05■■■□□ 2.88
TSPAN4-219ENST00000530404 LRRC9Q6ZRR7 1453 aa33.05■■■□□ 2.88
TSPAN4-219ENST00000530404 KIF3BO15066 747 aa33.02■■■□□ 2.88
TSPAN4-219ENST00000530404 PPP6R1Q9UPN7 881 aa33.02■■■□□ 2.88
TSPAN4-219ENST00000530404 DNMT1P26358 1616 aaKnown RBP32.99■■■□□ 2.87
TSPAN4-219ENST00000530404 PLA2R1Q13018 1463 aa32.99■■■□□ 2.87
TSPAN4-219ENST00000530404 KDM5DQ9BY66 1539 aa32.98■■■□□ 2.87
TSPAN4-219ENST00000530404 POLR1AO95602 1720 aaPredicted RBP32.97■■■□□ 2.87
TSPAN4-219ENST00000530404 TCOF1Q13428 1488 aaKnown RBP32.95■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms