RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 CCDC18Q5T9S5 1454 aa34.07■■■■□ 3.04
SMPD1-204ENST00000530395 MAGI2Q86UL8 1455 aa34.06■■■■□ 3.04
SMPD1-204ENST00000530395 SCAPERQ9BY12 1400 aa34.05■■■■□ 3.04
SMPD1-204ENST00000530395 POGZQ7Z3K3 1410 aa34.04■■■■□ 3.04
SMPD1-204ENST00000530395 PTPRMP28827 1452 aa34.04■■■■□ 3.04
SMPD1-204ENST00000530395 EFCAB2Q5VUJ9 269 aa34.04■■■■□ 3.04
SMPD1-204ENST00000530395 MADDQ8WXG6 1647 aa34.04■■■■□ 3.04
SMPD1-204ENST00000530395 ARHGAP5Q13017 1502 aa34■■■■□ 3.03
SMPD1-204ENST00000530395 FYCO1Q9BQS8 1478 aa33.98■■■■□ 3.03
SMPD1-204ENST00000530395 YEATS2Q9ULM3 1422 aa33.97■■■■□ 3.03
SMPD1-204ENST00000530395 RIMS1Q86UR5 1692 aaKnown RBP33.93■■■■□ 3.02
SMPD1-204ENST00000530395 CDC42BPBQ9Y5S2 1711 aa33.92■■■■□ 3.02
SMPD1-204ENST00000530395 SIGLEC1Q9BZZ2 1709 aa33.9■■■■□ 3.02
SMPD1-204ENST00000530395 PREX2Q70Z35 1606 aa33.9■■■■□ 3.02
SMPD1-204ENST00000530395 ZNF518AQ6AHZ1 1483 aa33.9■■■■□ 3.02
SMPD1-204ENST00000530395 ATP10AO60312 1499 aa33.84■■■■□ 3.01
SMPD1-204ENST00000530395 KDM5CP41229 1560 aa33.84■■■■□ 3.01
SMPD1-204ENST00000530395 C9orf84Q5VXU9 1444 aa33.83■■■■□ 3.01
SMPD1-204ENST00000530395 FER1L4A9Z1Z3 1794 aa33.81■■■■□ 3
SMPD1-204ENST00000530395 CDC42BPAQ5VT25 1732 aa33.81■■■■□ 3
SMPD1-204ENST00000530395 ABCC1P33527 1531 aa33.79■■■■□ 3
SMPD1-204ENST00000530395 ITSN2Q9NZM3 1697 aa33.77■■■■□ 3
SMPD1-204ENST00000530395 MLECQ14165 292 aa33.75■■■□□ 2.99
SMPD1-204ENST00000530395 AFAP1Q8N556 730 aa33.75■■■□□ 2.99
SMPD1-204ENST00000530395 MYT1LQ9UL68 1186 aa33.73■■■□□ 2.99
SMPD1-204ENST00000530395 DIP2CQ9Y2E4 1556 aa33.71■■■□□ 2.99
SMPD1-204ENST00000530395 ARHGEF12Q9NZN5 1544 aa33.7■■■□□ 2.99
SMPD1-204ENST00000530395 LMTK3Q96Q04 1460 aa33.69■■■□□ 2.98
SMPD1-204ENST00000530395 MLH3Q9UHC1 1453 aa33.69■■■□□ 2.98
SMPD1-204ENST00000530395 REREQ9P2R6 1566 aa33.68■■■□□ 2.98
SMPD1-204ENST00000530395 ABCA6Q8N139 1617 aa33.67■■■□□ 2.98
SMPD1-204ENST00000530395 PLPPR3Q6T4P5 718 aa33.66■■■□□ 2.98
SMPD1-204ENST00000530395 TRAPPC8Q9Y2L5 1435 aa33.66■■■□□ 2.98
SMPD1-204ENST00000530395 GPATCH8Q9UKJ3 1502 aaKnown RBP33.63■■■□□ 2.97
SMPD1-204ENST00000530395 CEP162Q5TB80 1403 aa33.62■■■□□ 2.97
SMPD1-204ENST00000530395 ILDR1Q86SU0 546 aaPredicted RBP33.62■■■□□ 2.97
SMPD1-204ENST00000530395 SAMD9LQ8IVG5 1584 aa33.62■■■□□ 2.97
SMPD1-204ENST00000530395 MTUS2Q5JR59 1369 aa33.6■■■□□ 2.97
SMPD1-204ENST00000530395 ZNF777Q9ULD5 760 aaPredicted RBP33.59■■■□□ 2.97
SMPD1-204ENST00000530395 KIDINS220Q9ULH0 1771 aa33.58■■■□□ 2.97
SMPD1-204ENST00000530395 SYCP2Q9BX26 1530 aa33.57■■■□□ 2.96
SMPD1-204ENST00000530395 CCNB3Q8WWL7 1395 aa33.56■■■□□ 2.96
SMPD1-204ENST00000530395 EHBP1L1Q8N3D4 1523 aa33.54■■■□□ 2.96
SMPD1-204ENST00000530395 AGLP35573 1532 aa33.53■■■□□ 2.96
SMPD1-204ENST00000530395 PLEKHH2Q8IVE3 1493 aa33.53■■■□□ 2.96
SMPD1-204ENST00000530395 CFDP1Q9UEE9 299 aaPredicted RBP33.51■■■□□ 2.95
SMPD1-204ENST00000530395 PREX1Q8TCU6 1659 aa33.51■■■□□ 2.95
SMPD1-204ENST00000530395 KIAA1107Q9UPP5 1409 aa33.48■■■□□ 2.95
SMPD1-204ENST00000530395 HSPA2P54652 639 aa33.46■■■□□ 2.95
SMPD1-204ENST00000530395 TIAM1Q13009 1591 aa33.46■■■□□ 2.95
SMPD1-204ENST00000530395 SPAG9O60271 1321 aaKnown RBP33.45■■■□□ 2.95
SMPD1-204ENST00000530395 HNRNPMP52272 730 aaKnown RBP eCLIP33.44■■■□□ 2.94
SMPD1-204ENST00000530395 ATP7AQ04656 1500 aa33.43■■■□□ 2.94
SMPD1-204ENST00000530395 ESF1Q9H501 851 aaKnown RBP33.42■■■□□ 2.94
SMPD1-204ENST00000530395 CEBPAP49715 358 aaPredicted RBP33.41■■■□□ 2.94
SMPD1-204ENST00000530395 INO80Q9ULG1 1556 aaPredicted RBP33.41■■■□□ 2.94
SMPD1-204ENST00000530395 C3P01024 1663 aa33.4■■■□□ 2.94
SMPD1-204ENST00000530395 SETD1BQ9UPS6 1966 aaKnown RBP33.38■■■□□ 2.93
SMPD1-204ENST00000530395 SUPT6HQ7KZ85 1726 aaKnown RBP33.36■■■□□ 2.93
SMPD1-204ENST00000530395 CNTLNQ9NXG0 1405 aa33.35■■■□□ 2.93
SMPD1-204ENST00000530395 UHRF1BP1Q6BDS2 1440 aa33.33■■■□□ 2.93
SMPD1-204ENST00000530395 PLXNC1O60486 1568 aa33.3■■■□□ 2.92
SMPD1-204ENST00000530395 MROH2AA6NES4 1674 aa33.29■■■□□ 2.92
SMPD1-204ENST00000530395 ADGBQ8N7X0 1667 aa33.29■■■□□ 2.92
SMPD1-204ENST00000530395 A2MP01023 1474 aa33.29■■■□□ 2.92
SMPD1-204ENST00000530395 NCOA2Q15596 1464 aa33.29■■■□□ 2.92
SMPD1-204ENST00000530395 VPS8Q8N3P4 1428 aa33.28■■■□□ 2.92
SMPD1-204ENST00000530395 ZNF644Q9H582 1327 aaPredicted RBP33.27■■■□□ 2.92
SMPD1-204ENST00000530395 LOC105371045A0A1W2PR82 267 aa33.26■■■□□ 2.91
SMPD1-204ENST00000530395 MBD5Q9P267 1494 aa33.25■■■□□ 2.91
SMPD1-204ENST00000530395 FBXO41Q8TF61 875 aa33.25■■■□□ 2.91
SMPD1-204ENST00000530395 CLTCQ00610 1675 aaKnown RBP33.2■■■□□ 2.9
SMPD1-204ENST00000530395 RTEL1-TNFRSF6BF6WH68 1400 aa33.19■■■□□ 2.9
SMPD1-204ENST00000530395 CAMSAP2Q08AD1 1489 aa33.19■■■□□ 2.9
SMPD1-204ENST00000530395 CCDC141Q6ZP82 1450 aa33.18■■■□□ 2.9
SMPD1-204ENST00000530395 STRCQ7RTU9 1775 aa33.17■■■□□ 2.9
SMPD1-204ENST00000530395 LRRC9Q6ZRR7 1453 aa33.16■■■□□ 2.9
SMPD1-204ENST00000530395 NPATQ14207 1427 aa33.15■■■□□ 2.9
SMPD1-204ENST00000530395 ZMYM3Q14202 1370 aa33.13■■■□□ 2.89
SMPD1-204ENST00000530395 DMRT2Q9Y5R5 561 aa33.13■■■□□ 2.89
SMPD1-204ENST00000530395 RSPH4AQ5TD94 716 aa33.11■■■□□ 2.89
SMPD1-204ENST00000530395 MAP3K1Q13233 1512 aa33.11■■■□□ 2.89
SMPD1-204ENST00000530395 GGT6Q6P531 493 aa33.1■■■□□ 2.89
SMPD1-204ENST00000530395 ARHGEF5Q12774 1597 aa33.09■■■□□ 2.89
SMPD1-204ENST00000530395 PPP6R1Q9UPN7 881 aa33.07■■■□□ 2.88
SMPD1-204ENST00000530395 DHX29Q7Z478 1369 aaKnown RBP33.07■■■□□ 2.88
SMPD1-204ENST00000530395 CERKQ8TCT0 537 aa33.01■■■□□ 2.87
SMPD1-204ENST00000530395 MYO3AQ8NEV4 1616 aa33.01■■■□□ 2.87
SMPD1-204ENST00000530395 ZNF142P52746 1687 aaPredicted RBP32.99■■■□□ 2.87
SMPD1-204ENST00000530395 PTPRTO14522 1441 aa32.99■■■□□ 2.87
SMPD1-204ENST00000530395 TSPY4P0CV99 314 aa32.98■■■□□ 2.87
SMPD1-204ENST00000530395 TSPY10P0CW01 314 aa32.98■■■□□ 2.87
SMPD1-204ENST00000530395 PTPRKQ15262 1439 aa32.98■■■□□ 2.87
SMPD1-204ENST00000530395 NCOA1Q15788 1441 aa32.98■■■□□ 2.87
SMPD1-204ENST00000530395 CAMSAP1Q5T5Y3 1602 aa32.96■■■□□ 2.87
SMPD1-204ENST00000530395 KANK4Q5T7N3 995 aaPredicted RBP32.96■■■□□ 2.87
SMPD1-204ENST00000530395 FAM135AQ9P2D6 1515 aa32.96■■■□□ 2.87
SMPD1-204ENST00000530395 KIF3BO15066 747 aa32.94■■■□□ 2.86
SMPD1-204ENST00000530395 MYOM3Q5VTT5 1437 aa32.94■■■□□ 2.86
SMPD1-204ENST00000530395 MIA2Q96PC5 1412 aa32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 1059 ms