RNA–Protein interactions for RNA: ENST00000530334.5

ACER3-208, Transcript of alkaline ceramidase 3, humanhuman

TSL 2

Gene ACER3, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-208ENST00000530334 CABP2Q9NPB3 220 aa12.09□□□□□ -0.47
ACER3-208ENST00000530334 HOXB3P14651 431 aaPredicted RBP12.06□□□□□ -0.48
ACER3-208ENST00000530334 DPY19L2Q6NUT2 758 aa12.06□□□□□ -0.48
ACER3-208ENST00000530334 ZCCHC6Q5VYS8 1495 aaKnown RBP12.06□□□□□ -0.48
ACER3-208ENST00000530334 BOLA1Q9Y3E2 137 aa12.05□□□□□ -0.48
ACER3-208ENST00000530334 CUX2O14529 1486 aa12.04□□□□□ -0.48
ACER3-208ENST00000530334 SOX12O15370 315 aa12.04□□□□□ -0.48
ACER3-208ENST00000530334 RIOK3O14730 519 aaKnown RBP12.03□□□□□ -0.48
ACER3-208ENST00000530334 VGFO15240 615 aaPredicted RBP12.03□□□□□ -0.48
ACER3-208ENST00000530334 ERCC6Q03468 1493 aa11.95□□□□□ -0.5
ACER3-208ENST00000530334 DOK7Q18PE1 504 aa11.94□□□□□ -0.5
ACER3-208ENST00000530334 EFCAB3Q8N7B9 438 aa11.94□□□□□ -0.5
ACER3-208ENST00000530334 RIMBP2O15034 1052 aa11.92□□□□□ -0.5
ACER3-208ENST00000530334 ECM2O94769 699 aaPredicted RBP11.91□□□□□ -0.5
ACER3-208ENST00000530334 HOXB1P14653 301 aaPredicted RBP11.91□□□□□ -0.5
ACER3-208ENST00000530334 PLCB2Q00722 1185 aa11.9□□□□□ -0.5
ACER3-208ENST00000530334 ZSWIM6Q9HCJ5 1215 aa11.9□□□□□ -0.5
ACER3-208ENST00000530334 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.87□□□□□ -0.51
ACER3-208ENST00000530334 RNF25Q96BH1 459 aaPredicted RBP11.87□□□□□ -0.51
ACER3-208ENST00000530334 ZFP91Q96JP5 570 aaPredicted RBP11.87□□□□□ -0.51
ACER3-208ENST00000530334 ZNF710Q8N1W2 664 aa11.86□□□□□ -0.51
ACER3-208ENST00000530334 NLRP6P59044 892 aa11.85□□□□□ -0.51
ACER3-208ENST00000530334 MICALL2Q8IY33 904 aa11.84□□□□□ -0.51
ACER3-208ENST00000530334 TMEM92Q6UXU6 159 aa11.81□□□□□ -0.52
ACER3-208ENST00000530334 RNF166Q96A37 237 aaPredicted RBP11.8□□□□□ -0.52
ACER3-208ENST00000530334 ERBB3P21860 1342 aa11.78□□□□□ -0.52
ACER3-208ENST00000530334 RGL2O15211 777 aa11.77□□□□□ -0.53
ACER3-208ENST00000530334 BBXQ8WY36 941 aaPredicted RBP11.77□□□□□ -0.53
ACER3-208ENST00000530334 NCAPD3P42695 1498 aa11.76□□□□□ -0.53
ACER3-208ENST00000530334 VARS2Q5ST30 1063 aaKnown RBP11.76□□□□□ -0.53
ACER3-208ENST00000530334 MS4A4AQ96JQ5 239 aa11.75□□□□□ -0.53
ACER3-208ENST00000530334 BCL11BQ9C0K0 894 aaPredicted RBP11.75□□□□□ -0.53
ACER3-208ENST00000530334 PHF8Q9UPP1 1060 aa11.75□□□□□ -0.53
ACER3-208ENST00000530334 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.73□□□□□ -0.53
ACER3-208ENST00000530334 GPR153Q6NV75 609 aa11.71□□□□□ -0.53
ACER3-208ENST00000530334 FBXO22Q8NEZ5 403 aa11.71□□□□□ -0.53
ACER3-208ENST00000530334 MYT1LQ9UL68 1186 aa11.71□□□□□ -0.53
ACER3-208ENST00000530334 STK24Q9Y6E0 443 aa11.71□□□□□ -0.53
ACER3-208ENST00000530334 STK25O00506 426 aa11.69□□□□□ -0.54
ACER3-208ENST00000530334 ZNF687Q8N1G0 1237 aa11.69□□□□□ -0.54
ACER3-208ENST00000530334 NESP48681 1621 aa11.67□□□□□ -0.54
ACER3-208ENST00000530334 ATAD2BQ9ULI0 1458 aa11.65□□□□□ -0.54
ACER3-208ENST00000530334 HAP1P54257 671 aaPredicted RBP11.65□□□□□ -0.54
ACER3-208ENST00000530334 PTGER2P43116 358 aa11.64□□□□□ -0.55
ACER3-208ENST00000530334 MFRPQ9BY79 579 aa11.64□□□□□ -0.55
ACER3-208ENST00000530334 SMARCA2P51531 1590 aa11.62□□□□□ -0.55
ACER3-208ENST00000530334 HMGXB3Q12766 1538 aa11.61□□□□□ -0.55
ACER3-208ENST00000530334 SLC34A2O95436 690 aa11.6□□□□□ -0.55
ACER3-208ENST00000530334 VSIG10Q8N0Z9 540 aa11.6□□□□□ -0.55
ACER3-208ENST00000530334 THOC2Q8NI27 1593 aaKnown RBP11.59□□□□□ -0.55
ACER3-208ENST00000530334 CHGAP10645 457 aaKnown RBP11.59□□□□□ -0.55
ACER3-208ENST00000530334 KIF3CO14782 793 aa11.58□□□□□ -0.56
ACER3-208ENST00000530334 HS6ST3Q8IZP7 471 aa11.58□□□□□ -0.56
ACER3-208ENST00000530334 PAXIP1Q6ZW49 1069 aaPredicted RBP11.57□□□□□ -0.56
ACER3-208ENST00000530334 KHSRPQ92945 711 aaKnown RBP eCLIP11.57□□□□□ -0.568e-6■■■□□ 18.5
ACER3-208ENST00000530334 SPRYD3Q8NCJ5 442 aa11.56□□□□□ -0.56
ACER3-208ENST00000530334 PDS5BQ9NTI5 1447 aa11.56□□□□□ -0.56
ACER3-208ENST00000530334 LAMC3Q9Y6N6 1575 aa11.55□□□□□ -0.56
ACER3-208ENST00000530334 ARSIQ5FYB1 569 aa11.55□□□□□ -0.56
ACER3-208ENST00000530334 BAZ1BQ9UIG0 1483 aaKnown RBP11.55□□□□□ -0.56
ACER3-208ENST00000530334 TMC2Q8TDI7 906 aa11.53□□□□□ -0.56
ACER3-208ENST00000530334 RYDENQ9NUL5 291 aaKnown RBP11.53□□□□□ -0.56
ACER3-208ENST00000530334 POTEEQ6S8J3 1075 aa11.52□□□□□ -0.57
ACER3-208ENST00000530334 CFAP44Q96MT7 982 aa11.52□□□□□ -0.57
ACER3-208ENST00000530334 SMARCA4P51532 1647 aa11.51□□□□□ -0.57
ACER3-208ENST00000530334 PSDA5PKW4 1024 aaPredicted RBP11.51□□□□□ -0.57
ACER3-208ENST00000530334 ZNF316A6NFI3 1004 aaPredicted RBP11.51□□□□□ -0.57
ACER3-208ENST00000530334 PBX2P40425 430 aa11.51□□□□□ -0.57
ACER3-208ENST00000530334 C2orf72A6NCS6 295 aa11.5□□□□□ -0.57
ACER3-208ENST00000530334 ANKRD13DQ6ZTN6 518 aa11.5□□□□□ -0.57
ACER3-208ENST00000530334 LSM11P83369 360 aaKnown RBP eCLIP11.48□□□□□ -0.571e-6■■■■■ 28.9
ACER3-208ENST00000530334 KIF21AQ7Z4S6 1674 aa11.46□□□□□ -0.58
ACER3-208ENST00000530334 BAZ1AQ9NRL2 1556 aaPredicted RBP11.44□□□□□ -0.58
ACER3-208ENST00000530334 MRC2Q9UBG0 1479 aa11.44□□□□□ -0.58
ACER3-208ENST00000530334 CADPSQ9ULU8 1353 aa11.41□□□□□ -0.58
ACER3-208ENST00000530334 PCDHGA4Q9Y5G9 962 aa11.41□□□□□ -0.58
ACER3-208ENST00000530334 KDM2AQ9Y2K7 1162 aa11.4□□□□□ -0.58
ACER3-208ENST00000530334 PEG3Q9GZU2 1588 aa11.4□□□□□ -0.58
ACER3-208ENST00000530334 FOXK1P85037 733 aa11.39□□□□□ -0.59
ACER3-208ENST00000530334 PTCD2Q8WV60 388 aaKnown RBP11.39□□□□□ -0.59
ACER3-208ENST00000530334 TBC1D12O60347 775 aa11.38□□□□□ -0.59
ACER3-208ENST00000530334 BCANQ96GW7 911 aa11.38□□□□□ -0.59
ACER3-208ENST00000530334 GPHNQ9NQX3 736 aaPredicted RBP11.38□□□□□ -0.59
ACER3-208ENST00000530334 TSHZ2Q9NRE2 1034 aa11.38□□□□□ -0.59
ACER3-208ENST00000530334 WDR62O43379 1518 aa11.38□□□□□ -0.59
ACER3-208ENST00000530334 AXIN2Q9Y2T1 843 aa11.37□□□□□ -0.59
ACER3-208ENST00000530334 NKX1-1Q15270 411 aaPredicted RBP11.36□□□□□ -0.59
ACER3-208ENST00000530334 NUDT7P0C024 238 aa11.35□□□□□ -0.59
ACER3-208ENST00000530334 PLA2G2EQ9NZK7 142 aa11.35□□□□□ -0.59
ACER3-208ENST00000530334 GTPBP6O43824 516 aaPredicted RBP11.32□□□□□ -0.6
ACER3-208ENST00000530334 PPP1R37O75864 691 aa11.32□□□□□ -0.6
ACER3-208ENST00000530334 LHX6Q9UPM6 363 aa11.32□□□□□ -0.6
ACER3-208ENST00000530334 CEP164Q9UPV0 1460 aa11.32□□□□□ -0.6
ACER3-208ENST00000530334 MROH2BQ7Z745 1585 aa11.29□□□□□ -0.6
ACER3-208ENST00000530334 KDM4FA0A1W2PPD8 638 aa11.29□□□□□ -0.6
ACER3-208ENST00000530334 TK2O00142 265 aa11.29□□□□□ -0.6
ACER3-208ENST00000530334 ARHGAP33O14559 1287 aa11.29□□□□□ -0.6
ACER3-208ENST00000530334 PLPP6Q8IY26 295 aa11.29□□□□□ -0.6
ACER3-208ENST00000530334 FANCD2Q9BXW9 1451 aa11.26□□□□□ -0.61
ACER3-208ENST00000530334 PPP4R3BQ5MIZ7 849 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms