RNA–Protein interactions for RNA: ENST00000530068.5

CTNND1-224, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-224ENST00000530068 TTC37Q6PGP7 1564 aa18.44■□□□□ 0.54
CTNND1-224ENST00000530068 FMN1Q68DA7 1419 aa18.44■□□□□ 0.54
CTNND1-224ENST00000530068 CERKQ8TCT0 537 aa18.44■□□□□ 0.54
CTNND1-224ENST00000530068 ATP1B4Q9UN42 357 aaPredicted RBP18.44■□□□□ 0.54
CTNND1-224ENST00000530068 ATP10AO60312 1499 aa18.44■□□□□ 0.54
CTNND1-224ENST00000530068 CDK13Q14004 1512 aaKnown RBP18.42■□□□□ 0.54
CTNND1-224ENST00000530068 HECW1Q76N89 1606 aa18.41■□□□□ 0.54
CTNND1-224ENST00000530068 C9orf84Q5VXU9 1444 aa18.41■□□□□ 0.54
CTNND1-224ENST00000530068 UBTFP17480 764 aaKnown RBP18.41■□□□□ 0.54
CTNND1-224ENST00000530068 DMRT2Q9Y5R5 561 aa18.41■□□□□ 0.54
CTNND1-224ENST00000530068 ZNF518AQ6AHZ1 1483 aa18.37■□□□□ 0.53
CTNND1-224ENST00000530068 ARHGEF12Q9NZN5 1544 aa18.37■□□□□ 0.53
CTNND1-224ENST00000530068 CLIP1P30622 1438 aa18.36■□□□□ 0.53
CTNND1-224ENST00000530068 MYT1LQ9UL68 1186 aa18.36■□□□□ 0.53
CTNND1-224ENST00000530068 TROQ12816 1431 aaPredicted RBP18.33■□□□□ 0.53
CTNND1-224ENST00000530068 FER1L4A9Z1Z3 1794 aa18.32■□□□□ 0.52
CTNND1-224ENST00000530068 CEBPAP49715 358 aaPredicted RBP18.32■□□□□ 0.52
CTNND1-224ENST00000530068 AFAP1Q8N556 730 aa18.32■□□□□ 0.52
CTNND1-224ENST00000530068 ESF1Q9H501 851 aaKnown RBP18.31■□□□□ 0.52
CTNND1-224ENST00000530068 UHRF1BP1Q6BDS2 1440 aa18.31■□□□□ 0.52
CTNND1-224ENST00000530068 SIGLEC1Q9BZZ2 1709 aa18.29■□□□□ 0.52
CTNND1-224ENST00000530068 ARHGAP5Q13017 1502 aa18.29■□□□□ 0.52
CTNND1-224ENST00000530068 ARHGAP35Q9NRY4 1499 aa18.29■□□□□ 0.52
CTNND1-224ENST00000530068 KIF14Q15058 1648 aa18.29■□□□□ 0.52
CTNND1-224ENST00000530068 MYO5CQ9NQX4 1742 aa18.28■□□□□ 0.52
CTNND1-224ENST00000530068 EHMT2Q96KQ7 1210 aa18.27■□□□□ 0.52
CTNND1-224ENST00000530068 KDM5CP41229 1560 aa18.26■□□□□ 0.51
CTNND1-224ENST00000530068 PREX1Q8TCU6 1659 aa18.26■□□□□ 0.51
CTNND1-224ENST00000530068 MLH3Q9UHC1 1453 aa18.26■□□□□ 0.51
CTNND1-224ENST00000530068 SETD1BQ9UPS6 1966 aaKnown RBP18.24■□□□□ 0.51
CTNND1-224ENST00000530068 REREQ9P2R6 1566 aa18.23■□□□□ 0.51
CTNND1-224ENST00000530068 PTPRTO14522 1441 aa18.23■□□□□ 0.51
CTNND1-224ENST00000530068 AGLP35573 1532 aa18.21■□□□□ 0.51
CTNND1-224ENST00000530068 CNTLNQ9NXG0 1405 aa18.21■□□□□ 0.51
CTNND1-224ENST00000530068 TRAPPC8Q9Y2L5 1435 aa18.21■□□□□ 0.51
CTNND1-224ENST00000530068 DIP2CQ9Y2E4 1556 aa18.2■□□□□ 0.5
CTNND1-224ENST00000530068 CCDC18Q5T9S5 1454 aa18.19■□□□□ 0.5
CTNND1-224ENST00000530068 DISP3Q9P2K9 1392 aa18.17■□□□□ 0.5
CTNND1-224ENST00000530068 CASKIN1Q8WXD9 1431 aa18.17■□□□□ 0.5
CTNND1-224ENST00000530068 ABCC1P33527 1531 aa18.13■□□□□ 0.49
CTNND1-224ENST00000530068 STRCQ7RTU9 1775 aa18.12■□□□□ 0.49
CTNND1-224ENST00000530068 SPAG9O60271 1321 aaKnown RBP18.12■□□□□ 0.49
CTNND1-224ENST00000530068 NPATQ14207 1427 aa18.12■□□□□ 0.49
CTNND1-224ENST00000530068 ABCA6Q8N139 1617 aa18.12■□□□□ 0.49
CTNND1-224ENST00000530068 ZNF777Q9ULD5 760 aaPredicted RBP18.11■□□□□ 0.49
CTNND1-224ENST00000530068 PREX2Q70Z35 1606 aa18.11■□□□□ 0.49
CTNND1-224ENST00000530068 IQSEC2Q5JU85 1478 aa18.1■□□□□ 0.49
CTNND1-224ENST00000530068 NCOA1Q15788 1441 aa18.1■□□□□ 0.49
CTNND1-224ENST00000530068 SOCS7O14512 581 aa18.1■□□□□ 0.49
CTNND1-224ENST00000530068 CDC42BPBQ9Y5S2 1711 aa18.09■□□□□ 0.49
CTNND1-224ENST00000530068 C3P01024 1663 aa18.08■□□□□ 0.48
CTNND1-224ENST00000530068 ZMYM3Q14202 1370 aa18.07■□□□□ 0.48
CTNND1-224ENST00000530068 FYCO1Q9BQS8 1478 aa18.07■□□□□ 0.48
CTNND1-224ENST00000530068 PPP6R1Q9UPN7 881 aa18.06■□□□□ 0.48
CTNND1-224ENST00000530068 PLEKHH2Q8IVE3 1493 aa18.06■□□□□ 0.48
CTNND1-224ENST00000530068 ITSN2Q9NZM3 1697 aa18.06■□□□□ 0.48
CTNND1-224ENST00000530068 HNRNPMP52272 730 aaKnown RBP eCLIP18.05■□□□□ 0.483e-6■■□□□ 11.7
CTNND1-224ENST00000530068 PKD2Q13563 968 aa18.05■□□□□ 0.48
CTNND1-224ENST00000530068 ILDR2Q71H61 639 aa18.05■□□□□ 0.48
CTNND1-224ENST00000530068 CFDP1Q9UEE9 299 aaPredicted RBP18.05■□□□□ 0.48
CTNND1-224ENST00000530068 KIAA1107Q9UPP5 1409 aa18.05■□□□□ 0.48
CTNND1-224ENST00000530068 KIDINS220Q9ULH0 1771 aa18.04■□□□□ 0.48
CTNND1-224ENST00000530068 SAMD9LQ8IVG5 1584 aa18.04■□□□□ 0.48
CTNND1-224ENST00000530068 LTBP4Q8N2S1 1624 aa18.03■□□□□ 0.48
CTNND1-224ENST00000530068 GPATCH8Q9UKJ3 1502 aaKnown RBP18.03■□□□□ 0.48
CTNND1-224ENST00000530068 LRRIQ1Q96JM4 1722 aa18.01■□□□□ 0.47
CTNND1-224ENST00000530068 CCNB3Q8WWL7 1395 aa18.01■□□□□ 0.47
CTNND1-224ENST00000530068 CAMSAP1Q5T5Y3 1602 aa18■□□□□ 0.47
CTNND1-224ENST00000530068 MROH2AA6NES4 1674 aa17.99■□□□□ 0.47
CTNND1-224ENST00000530068 NCKAP5LQ9HCH0 1330 aa17.99■□□□□ 0.47
CTNND1-224ENST00000530068 SYCP2Q9BX26 1530 aa17.99■□□□□ 0.47
CTNND1-224ENST00000530068 GGT6Q6P531 493 aa17.99■□□□□ 0.47
CTNND1-224ENST00000530068 A2MP01023 1474 aa17.99■□□□□ 0.47
CTNND1-224ENST00000530068 PLA2R1Q13018 1463 aa17.98■□□□□ 0.47
CTNND1-224ENST00000530068 CDC42BPAQ5VT25 1732 aa17.98■□□□□ 0.47
CTNND1-224ENST00000530068 MTUS2Q5JR59 1369 aa17.97■□□□□ 0.47
CTNND1-224ENST00000530068 UBAP1LF5GYI3 381 aa17.97■□□□□ 0.47
CTNND1-224ENST00000530068 ATP7AQ04656 1500 aa17.97■□□□□ 0.47
CTNND1-224ENST00000530068 ZNF335Q9H4Z2 1342 aaPredicted RBP17.96■□□□□ 0.46
CTNND1-224ENST00000530068 SPATA31D1Q6ZQQ2 1576 aa17.96■□□□□ 0.46
CTNND1-224ENST00000530068 PTPRKQ15262 1439 aa17.95■□□□□ 0.46
CTNND1-224ENST00000530068 PLXNC1O60486 1568 aa17.92■□□□□ 0.46
CTNND1-224ENST00000530068 TCOF1Q13428 1488 aaKnown RBP17.92■□□□□ 0.46
CTNND1-224ENST00000530068 RTEL1-TNFRSF6BF6WH68 1400 aa17.9■□□□□ 0.46
CTNND1-224ENST00000530068 INO80Q9ULG1 1556 aaPredicted RBP17.9■□□□□ 0.46
CTNND1-224ENST00000530068 SUPT6HQ7KZ85 1726 aaKnown RBP17.89■□□□□ 0.46
CTNND1-224ENST00000530068 CEP170BQ9Y4F5 1589 aaPredicted RBP17.89■□□□□ 0.45
CTNND1-224ENST00000530068 DHX29Q7Z478 1369 aaKnown RBP17.89■□□□□ 0.45
CTNND1-224ENST00000530068 A2ML1A8K2U0 1454 aa17.88■□□□□ 0.45
CTNND1-224ENST00000530068 ZNF142P52746 1687 aaPredicted RBP17.87■□□□□ 0.45
CTNND1-224ENST00000530068 RSPH4AQ5TD94 716 aa17.87■□□□□ 0.45
CTNND1-224ENST00000530068 CLTCQ00610 1675 aaKnown RBP17.87■□□□□ 0.45
CTNND1-224ENST00000530068 MYO3AQ8NEV4 1616 aa17.86■□□□□ 0.45
CTNND1-224ENST00000530068 ZNF644Q9H582 1327 aaPredicted RBP17.85■□□□□ 0.45
CTNND1-224ENST00000530068 MBD5Q9P267 1494 aa17.84■□□□□ 0.45
CTNND1-224ENST00000530068 TNRQ92752 1358 aa17.84■□□□□ 0.45
CTNND1-224ENST00000530068 KIF3BO15066 747 aa17.84■□□□□ 0.45
CTNND1-224ENST00000530068 TOM1O60784 492 aa17.84■□□□□ 0.45
CTNND1-224ENST00000530068 CEP162Q5TB80 1403 aa17.83■□□□□ 0.45
CTNND1-224ENST00000530068 ADGBQ8N7X0 1667 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms