RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 FANCAO15360 1455 aa8.97□□□□□ -0.97
RPUSD4-204ENST00000530036 RICTORQ6R327 1708 aa8.97□□□□□ -0.97
RPUSD4-204ENST00000530036 NCOA2Q15596 1464 aa8.96□□□□□ -0.97
RPUSD4-204ENST00000530036 COL17A1Q9UMD9 1497 aaPredicted RBP8.96□□□□□ -0.97
RPUSD4-204ENST00000530036 FRMPD1Q5SYB0 1578 aa8.96□□□□□ -0.97
RPUSD4-204ENST00000530036 PHLDB1Q86UU1 1377 aa8.96□□□□□ -0.98
RPUSD4-204ENST00000530036 ARHGAP5Q13017 1502 aa8.95□□□□□ -0.98
RPUSD4-204ENST00000530036 ABCC1P33527 1531 aa8.95□□□□□ -0.98
RPUSD4-204ENST00000530036 GPATCH8Q9UKJ3 1502 aaKnown RBP8.95□□□□□ -0.98
RPUSD4-204ENST00000530036 SAMD9LQ8IVG5 1584 aa8.95□□□□□ -0.98
RPUSD4-204ENST00000530036 FBXO41Q8TF61 875 aa8.94□□□□□ -0.98
RPUSD4-204ENST00000530036 AKNAQ7Z591 1439 aa8.94□□□□□ -0.98
RPUSD4-204ENST00000530036 ADGRL1O94910 1474 aa8.93□□□□□ -0.98
RPUSD4-204ENST00000530036 ZMYM4Q5VZL5 1548 aa8.93□□□□□ -0.98
RPUSD4-204ENST00000530036 KANK4Q5T7N3 995 aaPredicted RBP8.92□□□□□ -0.98
RPUSD4-204ENST00000530036 KDM5CP41229 1560 aa8.91□□□□□ -0.98
RPUSD4-204ENST00000530036 LMTK3Q96Q04 1460 aa8.91□□□□□ -0.98
RPUSD4-204ENST00000530036 POGZQ7Z3K3 1410 aa8.91□□□□□ -0.98
RPUSD4-204ENST00000530036 CCNB3Q8WWL7 1395 aa8.91□□□□□ -0.98
RPUSD4-204ENST00000530036 DENND4BO75064 1496 aaPredicted RBP8.9□□□□□ -0.98
RPUSD4-204ENST00000530036 EFCAB2Q5VUJ9 269 aa8.9□□□□□ -0.98
RPUSD4-204ENST00000530036 ARHGEF40Q8TER5 1519 aa8.9□□□□□ -0.99
RPUSD4-204ENST00000530036 SYCP2Q9BX26 1530 aa8.9□□□□□ -0.99
RPUSD4-204ENST00000530036 ARHGEF12Q9NZN5 1544 aa8.9□□□□□ -0.99
RPUSD4-204ENST00000530036 MYOM3Q5VTT5 1437 aa8.89□□□□□ -0.99
RPUSD4-204ENST00000530036 APLP2Q06481 763 aa8.89□□□□□ -0.99
RPUSD4-204ENST00000530036 ZNF518AQ6AHZ1 1483 aa8.89□□□□□ -0.99
RPUSD4-204ENST00000530036 PLEKHH2Q8IVE3 1493 aa8.89□□□□□ -0.99
RPUSD4-204ENST00000530036 SCAPERQ9BY12 1400 aa8.88□□□□□ -0.99
RPUSD4-204ENST00000530036 HECW2Q9P2P5 1572 aa8.88□□□□□ -0.99
RPUSD4-204ENST00000530036 CAMSAP2Q08AD1 1489 aa8.88□□□□□ -0.99
RPUSD4-204ENST00000530036 MIA2Q96PC5 1412 aa8.88□□□□□ -0.99
RPUSD4-204ENST00000530036 KIAA1107Q9UPP5 1409 aa8.88□□□□□ -0.99
RPUSD4-204ENST00000530036 ARHGEF5Q12774 1597 aa8.87□□□□□ -0.99
RPUSD4-204ENST00000530036 SOCS7O14512 581 aa8.87□□□□□ -0.99
RPUSD4-204ENST00000530036 PTPN23Q9H3S7 1636 aa8.87□□□□□ -0.99
RPUSD4-204ENST00000530036 INO80Q9ULG1 1556 aaPredicted RBP8.86□□□□□ -0.99
RPUSD4-204ENST00000530036 KIDINS220Q9ULH0 1771 aa8.86□□□□□ -0.99
RPUSD4-204ENST00000530036 MAGI2Q86UL8 1455 aa8.86□□□□□ -0.99
RPUSD4-204ENST00000530036 MBD5Q9P267 1494 aa8.86□□□□□ -0.99
RPUSD4-204ENST00000530036 CFDP1Q9UEE9 299 aaPredicted RBP8.86□□□□□ -0.99
RPUSD4-204ENST00000530036 TRAPPC8Q9Y2L5 1435 aa8.86□□□□□ -0.99
RPUSD4-204ENST00000530036 ZFYVE16Q7Z3T8 1539 aa8.85□□□□□ -0.99
RPUSD4-204ENST00000530036 CROCC2H7BZ55 1655 aa8.85□□□□□ -0.99
RPUSD4-204ENST00000530036 ABCA6Q8N139 1617 aa8.85□□□□□ -0.99
RPUSD4-204ENST00000530036 RAPGEF3O95398 923 aa8.85□□□□□ -0.99
RPUSD4-204ENST00000530036 ILDR2Q71H61 639 aa8.85□□□□□ -0.99
RPUSD4-204ENST00000530036 FGD6Q6ZV73 1430 aa8.85□□□□□ -0.99
RPUSD4-204ENST00000530036 TCOF1Q13428 1488 aaKnown RBP8.84□□□□□ -0.99
RPUSD4-204ENST00000530036 MLH3Q9UHC1 1453 aa8.84□□□□□ -0.99
RPUSD4-204ENST00000530036 SIGLEC1Q9BZZ2 1709 aa8.84□□□□□ -0.99
RPUSD4-204ENST00000530036 DIP2CQ9Y2E4 1556 aa8.84□□□□□ -0.99
RPUSD4-204ENST00000530036 CCDC141Q6ZP82 1450 aa8.83□□□□□ -1
RPUSD4-204ENST00000530036 REREQ9P2R6 1566 aa8.83□□□□□ -1
RPUSD4-204ENST00000530036 MAST1Q9Y2H9 1570 aa8.83□□□□□ -1
RPUSD4-204ENST00000530036 YEATS2Q9ULM3 1422 aa8.83□□□□□ -1
RPUSD4-204ENST00000530036 ATP7AQ04656 1500 aa8.83□□□□□ -1
RPUSD4-204ENST00000530036 DNMT1P26358 1616 aaKnown RBP8.83□□□□□ -1
RPUSD4-204ENST00000530036 ZNF644Q9H582 1327 aaPredicted RBP8.82□□□□□ -1
RPUSD4-204ENST00000530036 ADGBQ8N7X0 1667 aa8.82□□□□□ -1
RPUSD4-204ENST00000530036 ZNF777Q9ULD5 760 aaPredicted RBP8.82□□□□□ -1
RPUSD4-204ENST00000530036 HNRNPMP52272 730 aaKnown RBP eCLIP8.8□□□□□ -1
RPUSD4-204ENST00000530036 AFAP1Q8N556 730 aa8.8□□□□□ -1
RPUSD4-204ENST00000530036 SHANK2Q9UPX8 1470 aa8.8□□□□□ -1
RPUSD4-204ENST00000530036 PLXNC1O60486 1568 aa8.8□□□□□ -1
RPUSD4-204ENST00000530036 BCORL1Q5H9F3 1711 aa8.8□□□□□ -1
RPUSD4-204ENST00000530036 RTEL1-TNFRSF6BF6WH68 1400 aa8.8□□□□□ -1
RPUSD4-204ENST00000530036 C9orf84Q5VXU9 1444 aa8.79□□□□□ -1
RPUSD4-204ENST00000530036 ATP10AO60312 1499 aa8.78□□□□□ -1
RPUSD4-204ENST00000530036 AGLP35573 1532 aa8.78□□□□□ -1
RPUSD4-204ENST00000530036 DAPK1P53355 1430 aa8.78□□□□□ -1
RPUSD4-204ENST00000530036 RRBP1Q9P2E9 1410 aaKnown RBP8.78□□□□□ -1
RPUSD4-204ENST00000530036 ADAMTSL3P82987 1691 aa8.78□□□□□ -1
RPUSD4-204ENST00000530036 RSPH4AQ5TD94 716 aa8.77□□□□□ -1.01
RPUSD4-204ENST00000530036 ABCC5O15440 1437 aa8.77□□□□□ -1.01
RPUSD4-204ENST00000530036 SPAG9O60271 1321 aaKnown RBP8.77□□□□□ -1.01
RPUSD4-204ENST00000530036 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.76□□□□□ -1.01
RPUSD4-204ENST00000530036 DISP3Q9P2K9 1392 aa8.76□□□□□ -1.01
RPUSD4-204ENST00000530036 PPARGC1BQ86YN6 1023 aaKnown RBP8.76□□□□□ -1.01
RPUSD4-204ENST00000530036 EIF2AK4Q9P2K8 1649 aaKnown RBP8.75□□□□□ -1.01
RPUSD4-204ENST00000530036 ADGRL2O95490 1459 aa8.75□□□□□ -1.01
RPUSD4-204ENST00000530036 FER1L4A9Z1Z3 1794 aa8.74□□□□□ -1.01
RPUSD4-204ENST00000530036 MADDQ8WXG6 1647 aa8.74□□□□□ -1.01
RPUSD4-204ENST00000530036 A2MP01023 1474 aa8.74□□□□□ -1.01
RPUSD4-204ENST00000530036 RNF17Q9BXT8 1623 aaKnown RBP8.72□□□□□ -1.01
RPUSD4-204ENST00000530036 DUOX2Q9NRD8 1548 aa8.72□□□□□ -1.01
RPUSD4-204ENST00000530036 RIMS1Q86UR5 1692 aaKnown RBP8.72□□□□□ -1.01
RPUSD4-204ENST00000530036 PTPRKQ15262 1439 aa8.71□□□□□ -1.01
RPUSD4-204ENST00000530036 TSPY4P0CV99 314 aa8.71□□□□□ -1.02
RPUSD4-204ENST00000530036 TSPY10P0CW01 314 aa8.71□□□□□ -1.02
RPUSD4-204ENST00000530036 DEPDC5O75140 1603 aa8.71□□□□□ -1.02
RPUSD4-204ENST00000530036 MROH1Q8NDA8 1641 aa8.71□□□□□ -1.02
RPUSD4-204ENST00000530036 MROH2AA6NES4 1674 aa8.71□□□□□ -1.02
RPUSD4-204ENST00000530036 DHX29Q7Z478 1369 aaKnown RBP8.71□□□□□ -1.02
RPUSD4-204ENST00000530036 NCOA1Q15788 1441 aa8.71□□□□□ -1.02
RPUSD4-204ENST00000530036 FAM135AQ9P2D6 1515 aa8.7□□□□□ -1.02
RPUSD4-204ENST00000530036 GCC2Q8IWJ2 1684 aa8.7□□□□□ -1.02
RPUSD4-204ENST00000530036 FAM50AQ14320 339 aaKnown RBP8.7□□□□□ -1.02
RPUSD4-204ENST00000530036 MYT1LQ9UL68 1186 aa8.7□□□□□ -1.02
RPUSD4-204ENST00000530036 KIF15Q9NS87 1388 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms