RNA–Protein interactions for RNA: ENST00000529216.1

PABPC4-223, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 317 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-223ENST00000529216 TCOF1Q13428 1488 aaKnown RBP12.57□□□□□ -0.4
PABPC4-223ENST00000529216 CDC42BPAQ5VT25 1732 aa12.57□□□□□ -0.4
PABPC4-223ENST00000529216 MYO5CQ9NQX4 1742 aa12.57□□□□□ -0.4
PABPC4-223ENST00000529216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.56□□□□□ -0.4
PABPC4-223ENST00000529216 CFDP1Q9UEE9 299 aaPredicted RBP12.56□□□□□ -0.4
PABPC4-223ENST00000529216 ARHGAP5Q13017 1502 aa12.56□□□□□ -0.4
PABPC4-223ENST00000529216 FANCAO15360 1455 aa12.54□□□□□ -0.4
PABPC4-223ENST00000529216 PTPN23Q9H3S7 1636 aa12.54□□□□□ -0.4
PABPC4-223ENST00000529216 CAMSAP2Q08AD1 1489 aa12.53□□□□□ -0.4
PABPC4-223ENST00000529216 CFAP74Q9C0B2 1584 aa12.53□□□□□ -0.4
PABPC4-223ENST00000529216 EFCAB2Q5VUJ9 269 aa12.53□□□□□ -0.4
PABPC4-223ENST00000529216 PLEKHH2Q8IVE3 1493 aa12.53□□□□□ -0.4
PABPC4-223ENST00000529216 NEO1Q92859 1461 aa12.53□□□□□ -0.4
PABPC4-223ENST00000529216 CDC42BPBQ9Y5S2 1711 aa12.52□□□□□ -0.41
PABPC4-223ENST00000529216 KIAA1107Q9UPP5 1409 aa12.52□□□□□ -0.41
PABPC4-223ENST00000529216 TEX14Q8IWB6 1497 aa12.52□□□□□ -0.41
PABPC4-223ENST00000529216 SAMD9LQ8IVG5 1584 aa12.52□□□□□ -0.41
PABPC4-223ENST00000529216 KIF13AQ9H1H9 1805 aa12.51□□□□□ -0.41
PABPC4-223ENST00000529216 TRIM26Q12899 539 aaPredicted RBP12.51□□□□□ -0.41
PABPC4-223ENST00000529216 ABCC1P33527 1531 aa12.5□□□□□ -0.41
PABPC4-223ENST00000529216 ZNF644Q9H582 1327 aaPredicted RBP12.49□□□□□ -0.41
PABPC4-223ENST00000529216 FAM50AQ14320 339 aaKnown RBP12.49□□□□□ -0.41
PABPC4-223ENST00000529216 ZNF777Q9ULD5 760 aaPredicted RBP12.49□□□□□ -0.41
PABPC4-223ENST00000529216 ADGRL1O94910 1474 aa12.48□□□□□ -0.41
PABPC4-223ENST00000529216 AKNAQ7Z591 1439 aa12.48□□□□□ -0.41
PABPC4-223ENST00000529216 PPRC1Q5VV67 1664 aaKnown RBP12.48□□□□□ -0.41
PABPC4-223ENST00000529216 ARHGEF5Q12774 1597 aa12.47□□□□□ -0.41
PABPC4-223ENST00000529216 SYCP2Q9BX26 1530 aa12.47□□□□□ -0.41
PABPC4-223ENST00000529216 MBD5Q9P267 1494 aa12.47□□□□□ -0.41
PABPC4-223ENST00000529216 TRHP20396 242 aaPredicted RBP12.46□□□□□ -0.41
PABPC4-223ENST00000529216 DNMT1P26358 1616 aaKnown RBP12.46□□□□□ -0.41
PABPC4-223ENST00000529216 ARHGEF12Q9NZN5 1544 aa12.46□□□□□ -0.42
PABPC4-223ENST00000529216 CCDC141Q6ZP82 1450 aa12.46□□□□□ -0.42
PABPC4-223ENST00000529216 DAPK1P53355 1430 aa12.45□□□□□ -0.42
PABPC4-223ENST00000529216 RSPH4AQ5TD94 716 aa12.45□□□□□ -0.42
PABPC4-223ENST00000529216 SHANK2Q9UPX8 1470 aa12.45□□□□□ -0.42
PABPC4-223ENST00000529216 ABCC5O15440 1437 aa12.45□□□□□ -0.42
PABPC4-223ENST00000529216 SCAPERQ9BY12 1400 aa12.45□□□□□ -0.42
PABPC4-223ENST00000529216 POGZQ7Z3K3 1410 aa12.44□□□□□ -0.42
PABPC4-223ENST00000529216 ZNF518AQ6AHZ1 1483 aa12.43□□□□□ -0.42
PABPC4-223ENST00000529216 DENND4BO75064 1496 aaPredicted RBP12.42□□□□□ -0.42
PABPC4-223ENST00000529216 HNRNPMP52272 730 aaKnown RBP eCLIP12.42□□□□□ -0.42
PABPC4-223ENST00000529216 TRAPPC8Q9Y2L5 1435 aa12.42□□□□□ -0.42
PABPC4-223ENST00000529216 PTPRKQ15262 1439 aa12.41□□□□□ -0.42
PABPC4-223ENST00000529216 CROCC2H7BZ55 1655 aa12.41□□□□□ -0.42
PABPC4-223ENST00000529216 KDM5CP41229 1560 aa12.4□□□□□ -0.42
PABPC4-223ENST00000529216 MAST1Q9Y2H9 1570 aa12.4□□□□□ -0.42
PABPC4-223ENST00000529216 C9orf84Q5VXU9 1444 aa12.4□□□□□ -0.42
PABPC4-223ENST00000529216 ROCK1Q13464 1354 aa12.4□□□□□ -0.42
PABPC4-223ENST00000529216 ADGRL2O95490 1459 aa12.4□□□□□ -0.43
PABPC4-223ENST00000529216 RTEL1-TNFRSF6BF6WH68 1400 aa12.38□□□□□ -0.43
PABPC4-223ENST00000529216 TSPY4P0CV99 314 aa12.38□□□□□ -0.43
PABPC4-223ENST00000529216 TSPY10P0CW01 314 aa12.38□□□□□ -0.43
PABPC4-223ENST00000529216 ITGAEP38570 1179 aa12.38□□□□□ -0.43
PABPC4-223ENST00000529216 FRMPD1Q5SYB0 1578 aa12.38□□□□□ -0.43
PABPC4-223ENST00000529216 TSPOAP1O95153 1857 aa12.38□□□□□ -0.43
PABPC4-223ENST00000529216 ZMYM4Q5VZL5 1548 aa12.37□□□□□ -0.43
PABPC4-223ENST00000529216 ZFYVE16Q7Z3T8 1539 aa12.37□□□□□ -0.43
PABPC4-223ENST00000529216 AFAP1Q8N556 730 aa12.37□□□□□ -0.43
PABPC4-223ENST00000529216 PCGF6Q9BYE7 350 aa12.37□□□□□ -0.43
PABPC4-223ENST00000529216 INO80Q9ULG1 1556 aaPredicted RBP12.37□□□□□ -0.43
PABPC4-223ENST00000529216 MLH3Q9UHC1 1453 aa12.36□□□□□ -0.43
PABPC4-223ENST00000529216 ANKRD30AQ9BXX3 1397 aa12.36□□□□□ -0.43
PABPC4-223ENST00000529216 ATP7AQ04656 1500 aa12.36□□□□□ -0.43
PABPC4-223ENST00000529216 HFM1A2PYH4 1435 aa12.36□□□□□ -0.43
PABPC4-223ENST00000529216 SPAG9O60271 1321 aaKnown RBP12.36□□□□□ -0.43
PABPC4-223ENST00000529216 PLXNC1O60486 1568 aa12.35□□□□□ -0.43
PABPC4-223ENST00000529216 HECW2Q9P2P5 1572 aa12.35□□□□□ -0.43
PABPC4-223ENST00000529216 COL17A1Q9UMD9 1497 aaPredicted RBP12.35□□□□□ -0.43
PABPC4-223ENST00000529216 RICTORQ6R327 1708 aa12.35□□□□□ -0.43
PABPC4-223ENST00000529216 NCOA1Q15788 1441 aa12.35□□□□□ -0.43
PABPC4-223ENST00000529216 MAGI2Q86UL8 1455 aa12.34□□□□□ -0.43
PABPC4-223ENST00000529216 RAPGEF3O95398 923 aa12.34□□□□□ -0.43
PABPC4-223ENST00000529216 ADGBQ8N7X0 1667 aa12.34□□□□□ -0.43
PABPC4-223ENST00000529216 CHIC2Q9UKJ5 165 aa12.33□□□□□ -0.44
PABPC4-223ENST00000529216 NAIPQ13075 1403 aa12.32□□□□□ -0.44
PABPC4-223ENST00000529216 KDM6BO15054 1643 aa12.32□□□□□ -0.44
PABPC4-223ENST00000529216 KIF15Q9NS87 1388 aa12.31□□□□□ -0.44
PABPC4-223ENST00000529216 GCC2Q8IWJ2 1684 aa12.3□□□□□ -0.44
PABPC4-223ENST00000529216 DUOX2Q9NRD8 1548 aa12.3□□□□□ -0.44
PABPC4-223ENST00000529216 KIDINS220Q9ULH0 1771 aa12.3□□□□□ -0.44
PABPC4-223ENST00000529216 ERBINQ96RT1 1412 aa12.29□□□□□ -0.44
PABPC4-223ENST00000529216 SETD5Q9C0A6 1442 aa12.29□□□□□ -0.44
PABPC4-223ENST00000529216 FOXD1Q16676 465 aa12.29□□□□□ -0.44
PABPC4-223ENST00000529216 RRP7BPQ9NSQ0 103 aa12.29□□□□□ -0.44
PABPC4-223ENST00000529216 ARHGEF40Q8TER5 1519 aa12.28□□□□□ -0.44
PABPC4-223ENST00000529216 DIP2CQ9Y2E4 1556 aa12.28□□□□□ -0.44
PABPC4-223ENST00000529216 ABCA6Q8N139 1617 aa12.28□□□□□ -0.44
PABPC4-223ENST00000529216 ANKRD50Q9ULJ7 1429 aa12.28□□□□□ -0.44
PABPC4-223ENST00000529216 YEATS2Q9ULM3 1422 aa12.28□□□□□ -0.44
PABPC4-223ENST00000529216 MYT1LQ9UL68 1186 aa12.27□□□□□ -0.45
PABPC4-223ENST00000529216 REREQ9P2R6 1566 aa12.26□□□□□ -0.45
PABPC4-223ENST00000529216 DHX29Q7Z478 1369 aaKnown RBP12.26□□□□□ -0.45
PABPC4-223ENST00000529216 RAB3GAP2Q9H2M9 1393 aa12.26□□□□□ -0.45
PABPC4-223ENST00000529216 A2MP01023 1474 aa12.26□□□□□ -0.45
PABPC4-223ENST00000529216 HRCP23327 699 aa12.25□□□□□ -0.45
PABPC4-223ENST00000529216 ACIN1Q9UKV3 1341 aaKnown RBP12.25□□□□□ -0.45
PABPC4-223ENST00000529216 ATP10AO60312 1499 aa12.25□□□□□ -0.45
PABPC4-223ENST00000529216 EIF2AK4Q9P2K8 1649 aaKnown RBP12.24□□□□□ -0.45
PABPC4-223ENST00000529216 AGLP35573 1532 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms