RNA–Protein interactions for RNA: ENST00000529189.5

LTBP3-212, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-212ENST00000529189 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.56■■■■□ 3.12
LTBP3-212ENST00000529189 CDC42BPBQ9Y5S2 1711 aa34.55■■■■□ 3.12
LTBP3-212ENST00000529189 ABCA9Q8IUA7 1624 aa34.54■■■■□ 3.12
LTBP3-212ENST00000529189 ITGAEP38570 1179 aa34.53■■■■□ 3.12
LTBP3-212ENST00000529189 ZNF644Q9H582 1327 aaPredicted RBP34.5■■■■□ 3.11
LTBP3-212ENST00000529189 CAMSAP2Q08AD1 1489 aa34.49■■■■□ 3.11
LTBP3-212ENST00000529189 ARHGAP5Q13017 1502 aa34.48■■■■□ 3.11
LTBP3-212ENST00000529189 ZNF777Q9ULD5 760 aaPredicted RBP34.48■■■■□ 3.11
LTBP3-212ENST00000529189 PLCH2O75038 1416 aa34.46■■■■□ 3.11
LTBP3-212ENST00000529189 SAMD9LQ8IVG5 1584 aa34.41■■■■□ 3.1
LTBP3-212ENST00000529189 ARAP3Q8WWN8 1544 aa34.39■■■■□ 3.1
LTBP3-212ENST00000529189 DHX57Q6P158 1386 aaKnown RBP34.37■■■■□ 3.09
LTBP3-212ENST00000529189 DIP2BQ9P265 1576 aa34.37■■■■□ 3.09
LTBP3-212ENST00000529189 DNMT1P26358 1616 aaKnown RBP34.35■■■■□ 3.09
LTBP3-212ENST00000529189 PTPRKQ15262 1439 aa34.35■■■■□ 3.09
LTBP3-212ENST00000529189 GLI2P10070 1586 aa34.34■■■■□ 3.09
LTBP3-212ENST00000529189 SETD5Q9C0A6 1442 aa34.34■■■■□ 3.09
LTBP3-212ENST00000529189 CD109Q6YHK3 1445 aa34.33■■■■□ 3.09
LTBP3-212ENST00000529189 CLSPNQ9HAW4 1339 aa34.32■■■■□ 3.08
LTBP3-212ENST00000529189 RAB3GAP2Q9H2M9 1393 aa34.32■■■■□ 3.08
LTBP3-212ENST00000529189 EFCAB2Q5VUJ9 269 aa34.31■■■■□ 3.08
LTBP3-212ENST00000529189 DAPK1P53355 1430 aa34.31■■■■□ 3.08
LTBP3-212ENST00000529189 MAP3K4Q9Y6R4 1608 aa34.3■■■■□ 3.08
LTBP3-212ENST00000529189 FANCAO15360 1455 aa34.29■■■■□ 3.08
LTBP3-212ENST00000529189 ABCC5O15440 1437 aa34.29■■■■□ 3.08
LTBP3-212ENST00000529189 SYCP2Q9BX26 1530 aa34.28■■■■□ 3.08
LTBP3-212ENST00000529189 FAM69CQ0P6D2 419 aa34.27■■■■□ 3.08
LTBP3-212ENST00000529189 PLEKHH2Q8IVE3 1493 aa34.25■■■■□ 3.07
LTBP3-212ENST00000529189 ABCC1P33527 1531 aa34.25■■■■□ 3.07
LTBP3-212ENST00000529189 CROCC2H7BZ55 1655 aa34.24■■■■□ 3.07
LTBP3-212ENST00000529189 MBD5Q9P267 1494 aa34.24■■■■□ 3.07
LTBP3-212ENST00000529189 ARHGEF5Q12774 1597 aa34.24■■■■□ 3.07
LTBP3-212ENST00000529189 HNRNPMP52272 730 aaKnown RBP eCLIP34.23■■■■□ 3.07
LTBP3-212ENST00000529189 KIAA1107Q9UPP5 1409 aa34.21■■■■□ 3.07
LTBP3-212ENST00000529189 KIF13AQ9H1H9 1805 aa34.2■■■■□ 3.07
LTBP3-212ENST00000529189 ARHGEF12Q9NZN5 1544 aa34.2■■■■□ 3.07
LTBP3-212ENST00000529189 CHIC2Q9UKJ5 165 aa34.2■■■■□ 3.06
LTBP3-212ENST00000529189 CFAP74Q9C0B2 1584 aa34.18■■■■□ 3.06
LTBP3-212ENST00000529189 CCDC141Q6ZP82 1450 aa34.17■■■■□ 3.06
LTBP3-212ENST00000529189 ADGRL1O94910 1474 aa34.14■■■■□ 3.06
LTBP3-212ENST00000529189 AKNAQ7Z591 1439 aa34.14■■■■□ 3.06
LTBP3-212ENST00000529189 SHANK2Q9UPX8 1470 aa34.13■■■■□ 3.05
LTBP3-212ENST00000529189 TSPOAP1O95153 1857 aa34.11■■■■□ 3.05
LTBP3-212ENST00000529189 ADGBQ8N7X0 1667 aa34.11■■■■□ 3.05
LTBP3-212ENST00000529189 HFM1A2PYH4 1435 aa34.1■■■■□ 3.05
LTBP3-212ENST00000529189 C9orf84Q5VXU9 1444 aa34.1■■■■□ 3.05
LTBP3-212ENST00000529189 TRAPPC8Q9Y2L5 1435 aa34.09■■■■□ 3.05
LTBP3-212ENST00000529189 RSPH4AQ5TD94 716 aa34.09■■■■□ 3.05
LTBP3-212ENST00000529189 NEO1Q92859 1461 aa34.08■■■■□ 3.05
LTBP3-212ENST00000529189 PPRC1Q5VV67 1664 aaKnown RBP34.08■■■■□ 3.05
LTBP3-212ENST00000529189 SCAPERQ9BY12 1400 aa34.07■■■■□ 3.05
LTBP3-212ENST00000529189 ROCK1Q13464 1354 aa34.07■■■■□ 3.05
LTBP3-212ENST00000529189 RRP7BPQ9NSQ0 103 aa34.07■■■■□ 3.05
LTBP3-212ENST00000529189 NAIPQ13075 1403 aa34.06■■■■□ 3.04
LTBP3-212ENST00000529189 TSPY4P0CV99 314 aa34.05■■■■□ 3.04
LTBP3-212ENST00000529189 TSPY10P0CW01 314 aa34.05■■■■□ 3.04
LTBP3-212ENST00000529189 ADGRL2O95490 1459 aa34.05■■■■□ 3.04
LTBP3-212ENST00000529189 GCC2Q8IWJ2 1684 aa34.04■■■■□ 3.04
LTBP3-212ENST00000529189 MAST1Q9Y2H9 1570 aa34.02■■■■□ 3.04
LTBP3-212ENST00000529189 NCOA1Q15788 1441 aa34■■■■□ 3.03
LTBP3-212ENST00000529189 ANKRD30AQ9BXX3 1397 aa33.99■■■■□ 3.03
LTBP3-212ENST00000529189 TEX14Q8IWB6 1497 aa33.98■■■■□ 3.03
LTBP3-212ENST00000529189 AFAP1Q8N556 730 aa33.98■■■■□ 3.03
LTBP3-212ENST00000529189 POGZQ7Z3K3 1410 aa33.94■■■■□ 3.02
LTBP3-212ENST00000529189 ZNF518AQ6AHZ1 1483 aa33.92■■■■□ 3.02
LTBP3-212ENST00000529189 KDM6BO15054 1643 aa33.92■■■■□ 3.02
LTBP3-212ENST00000529189 ZFYVE16Q7Z3T8 1539 aa33.91■■■■□ 3.02
LTBP3-212ENST00000529189 SPAG9O60271 1321 aaKnown RBP33.91■■■■□ 3.02
LTBP3-212ENST00000529189 PLXNC1O60486 1568 aa33.9■■■■□ 3.02
LTBP3-212ENST00000529189 DENND4BO75064 1496 aaPredicted RBP33.9■■■■□ 3.02
LTBP3-212ENST00000529189 KIF15Q9NS87 1388 aa33.89■■■■□ 3.02
LTBP3-212ENST00000529189 INO80Q9ULG1 1556 aaPredicted RBP33.89■■■■□ 3.02
LTBP3-212ENST00000529189 TRHP20396 242 aaPredicted RBP33.87■■■■□ 3.01
LTBP3-212ENST00000529189 KDM5CP41229 1560 aa33.87■■■■□ 3.01
LTBP3-212ENST00000529189 ATP7AQ04656 1500 aa33.85■■■■□ 3.01
LTBP3-212ENST00000529189 RTEL1-TNFRSF6BF6WH68 1400 aa33.85■■■■□ 3.01
LTBP3-212ENST00000529189 RICTORQ6R327 1708 aa33.85■■■■□ 3.01
LTBP3-212ENST00000529189 RAPGEF3O95398 923 aa33.83■■■■□ 3.01
LTBP3-212ENST00000529189 FRMPD1Q5SYB0 1578 aa33.8■■■■□ 3
LTBP3-212ENST00000529189 ANKRD50Q9ULJ7 1429 aa33.8■■■■□ 3
LTBP3-212ENST00000529189 KIDINS220Q9ULH0 1771 aa33.79■■■■□ 3
LTBP3-212ENST00000529189 HECW2Q9P2P5 1572 aa33.78■■■■□ 3
LTBP3-212ENST00000529189 MYT1LQ9UL68 1186 aa33.78■■■■□ 3
LTBP3-212ENST00000529189 ZNF316A6NFI3 1004 aaPredicted RBP33.76■■■□□ 2.99
LTBP3-212ENST00000529189 DUOX2Q9NRD8 1548 aa33.74■■■□□ 2.99
LTBP3-212ENST00000529189 MLH3Q9UHC1 1453 aa33.74■■■□□ 2.99
LTBP3-212ENST00000529189 COL17A1Q9UMD9 1497 aaPredicted RBP33.69■■■□□ 2.98
LTBP3-212ENST00000529189 ZMYM4Q5VZL5 1548 aa33.68■■■□□ 2.98
LTBP3-212ENST00000529189 ABCA6Q8N139 1617 aa33.66■■■□□ 2.98
LTBP3-212ENST00000529189 ERBINQ96RT1 1412 aa33.66■■■□□ 2.98
LTBP3-212ENST00000529189 TRIM52Q96A61 297 aa33.65■■■□□ 2.98
LTBP3-212ENST00000529189 ACIN1Q9UKV3 1341 aaKnown RBP33.63■■■□□ 2.97
LTBP3-212ENST00000529189 SIN3AQ96ST3 1273 aa33.61■■■□□ 2.97
LTBP3-212ENST00000529189 DIP2CQ9Y2E4 1556 aa33.6■■■□□ 2.97
LTBP3-212ENST00000529189 YEATS2Q9ULM3 1422 aa33.59■■■□□ 2.97
LTBP3-212ENST00000529189 TIMELESSQ9UNS1 1208 aa33.58■■■□□ 2.97
LTBP3-212ENST00000529189 A2MP01023 1474 aa33.57■■■□□ 2.96
LTBP3-212ENST00000529189 DHX29Q7Z478 1369 aaKnown RBP33.57■■■□□ 2.96
LTBP3-212ENST00000529189 NEUROD1Q13562 356 aa33.56■■■□□ 2.96
LTBP3-212ENST00000529189 UNC13BO14795 1591 aa33.55■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms