RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 MYO5CQ9NQX4 1742 aa25.65■■□□□ 1.7
CTSB-215ENST00000528965 SCAPERQ9BY12 1400 aa25.63■■□□□ 1.69
CTSB-215ENST00000528965 TROQ12816 1431 aaPredicted RBP25.63■■□□□ 1.69
CTSB-215ENST00000528965 EFCAB2Q5VUJ9 269 aa25.61■■□□□ 1.69
CTSB-215ENST00000528965 YEATS2Q9ULM3 1422 aa25.59■■□□□ 1.69
CTSB-215ENST00000528965 RIMS1Q86UR5 1692 aaKnown RBP25.58■■□□□ 1.69
CTSB-215ENST00000528965 CCDC18Q5T9S5 1454 aa25.57■■□□□ 1.68
CTSB-215ENST00000528965 ARHGAP5Q13017 1502 aa25.56■■□□□ 1.68
CTSB-215ENST00000528965 PCF11O94913 1555 aaKnown RBP25.55■■□□□ 1.68
CTSB-215ENST00000528965 CASKIN1Q8WXD9 1431 aa25.54■■□□□ 1.68
CTSB-215ENST00000528965 ZNF518AQ6AHZ1 1483 aa25.53■■□□□ 1.68
CTSB-215ENST00000528965 C9orf84Q5VXU9 1444 aa25.51■■□□□ 1.67
CTSB-215ENST00000528965 ATP10AO60312 1499 aa25.51■■□□□ 1.67
CTSB-215ENST00000528965 LRRIQ1Q96JM4 1722 aa25.51■■□□□ 1.67
CTSB-215ENST00000528965 LMTK3Q96Q04 1460 aa25.48■■□□□ 1.67
CTSB-215ENST00000528965 SIGLEC1Q9BZZ2 1709 aa25.47■■□□□ 1.67
CTSB-215ENST00000528965 FYCO1Q9BQS8 1478 aa25.47■■□□□ 1.67
CTSB-215ENST00000528965 KDM5CP41229 1560 aa25.46■■□□□ 1.67
CTSB-215ENST00000528965 FER1L4A9Z1Z3 1794 aa25.46■■□□□ 1.67
CTSB-215ENST00000528965 MLECQ14165 292 aa25.44■■□□□ 1.66
CTSB-215ENST00000528965 PREX2Q70Z35 1606 aa25.44■■□□□ 1.66
CTSB-215ENST00000528965 ARHGEF12Q9NZN5 1544 aa25.42■■□□□ 1.66
CTSB-215ENST00000528965 PLPPR3Q6T4P5 718 aa25.4■■□□□ 1.66
CTSB-215ENST00000528965 MYT1LQ9UL68 1186 aa25.4■■□□□ 1.66
CTSB-215ENST00000528965 CDC42BPBQ9Y5S2 1711 aa25.4■■□□□ 1.66
CTSB-215ENST00000528965 ABCC1P33527 1531 aa25.39■■□□□ 1.66
CTSB-215ENST00000528965 AFAP1Q8N556 730 aa25.38■■□□□ 1.65
CTSB-215ENST00000528965 DIP2CQ9Y2E4 1556 aa25.36■■□□□ 1.65
CTSB-215ENST00000528965 REREQ9P2R6 1566 aa25.35■■□□□ 1.65
CTSB-215ENST00000528965 MLH3Q9UHC1 1453 aa25.35■■□□□ 1.65
CTSB-215ENST00000528965 ITSN2Q9NZM3 1697 aa25.33■■□□□ 1.65
CTSB-215ENST00000528965 ABCA6Q8N139 1617 aa25.31■■□□□ 1.64
CTSB-215ENST00000528965 CDC42BPAQ5VT25 1732 aa25.3■■□□□ 1.64
CTSB-215ENST00000528965 FBXO41Q8TF61 875 aa25.3■■□□□ 1.64
CTSB-215ENST00000528965 TRAPPC8Q9Y2L5 1435 aa25.29■■□□□ 1.64
CTSB-215ENST00000528965 HSPA2P54652 639 aa25.29■■□□□ 1.64
CTSB-215ENST00000528965 PREX1Q8TCU6 1659 aa25.27■■□□□ 1.64
CTSB-215ENST00000528965 AGLP35573 1532 aa25.27■■□□□ 1.64
CTSB-215ENST00000528965 ESF1Q9H501 851 aaKnown RBP25.22■■□□□ 1.63
CTSB-215ENST00000528965 ZNF777Q9ULD5 760 aaPredicted RBP25.22■■□□□ 1.63
CTSB-215ENST00000528965 SAMD9LQ8IVG5 1584 aa25.22■■□□□ 1.63
CTSB-215ENST00000528965 SYCP2Q9BX26 1530 aa25.22■■□□□ 1.63
CTSB-215ENST00000528965 GPATCH8Q9UKJ3 1502 aaKnown RBP25.22■■□□□ 1.63
CTSB-215ENST00000528965 PLEKHH2Q8IVE3 1493 aa25.21■■□□□ 1.63
CTSB-215ENST00000528965 MTUS2Q5JR59 1369 aa25.21■■□□□ 1.63
CTSB-215ENST00000528965 KIDINS220Q9ULH0 1771 aa25.21■■□□□ 1.63
CTSB-215ENST00000528965 UHRF1BP1Q6BDS2 1440 aa25.2■■□□□ 1.62
CTSB-215ENST00000528965 CCNB3Q8WWL7 1395 aa25.19■■□□□ 1.62
CTSB-215ENST00000528965 CEBPAP49715 358 aaPredicted RBP25.18■■□□□ 1.62
CTSB-215ENST00000528965 CNTLNQ9NXG0 1405 aa25.17■■□□□ 1.62
CTSB-215ENST00000528965 KIAA1107Q9UPP5 1409 aa25.17■■□□□ 1.62
CTSB-215ENST00000528965 CFDP1Q9UEE9 299 aaPredicted RBP25.16■■□□□ 1.62
CTSB-215ENST00000528965 SPAG9O60271 1321 aaKnown RBP25.15■■□□□ 1.62
CTSB-215ENST00000528965 EHBP1L1Q8N3D4 1523 aa25.14■■□□□ 1.62
CTSB-215ENST00000528965 C3P01024 1663 aa25.13■■□□□ 1.61
CTSB-215ENST00000528965 ATP7AQ04656 1500 aa25.12■■□□□ 1.61
CTSB-215ENST00000528965 CEP162Q5TB80 1403 aa25.11■■□□□ 1.61
CTSB-215ENST00000528965 SETD1BQ9UPS6 1966 aaKnown RBP25.11■■□□□ 1.61
CTSB-215ENST00000528965 HNRNPMP52272 730 aaKnown RBP eCLIP25.1■■□□□ 1.61
CTSB-215ENST00000528965 INO80Q9ULG1 1556 aaPredicted RBP25.1■■□□□ 1.61
CTSB-215ENST00000528965 DMRT2Q9Y5R5 561 aa25.09■■□□□ 1.61
CTSB-215ENST00000528965 TIAM1Q13009 1591 aa25.07■■□□□ 1.6
CTSB-215ENST00000528965 MROH2AA6NES4 1674 aa25.05■■□□□ 1.6
CTSB-215ENST00000528965 PLXNC1O60486 1568 aa25.05■■□□□ 1.6
CTSB-215ENST00000528965 A2MP01023 1474 aa25.04■■□□□ 1.6
CTSB-215ENST00000528965 CERKQ8TCT0 537 aa25.03■■□□□ 1.6
CTSB-215ENST00000528965 SUPT6HQ7KZ85 1726 aaKnown RBP25.03■■□□□ 1.6
CTSB-215ENST00000528965 NPATQ14207 1427 aa25.02■■□□□ 1.6
CTSB-215ENST00000528965 STRCQ7RTU9 1775 aa25■■□□□ 1.59
CTSB-215ENST00000528965 ADGBQ8N7X0 1667 aa24.99■■□□□ 1.59
CTSB-215ENST00000528965 PTPRTO14522 1441 aa24.95■■□□□ 1.59
CTSB-215ENST00000528965 ZMYM3Q14202 1370 aa24.95■■□□□ 1.59
CTSB-215ENST00000528965 MBD5Q9P267 1494 aa24.95■■□□□ 1.58
CTSB-215ENST00000528965 RTEL1-TNFRSF6BF6WH68 1400 aa24.95■■□□□ 1.58
CTSB-215ENST00000528965 ZNF644Q9H582 1327 aaPredicted RBP24.93■■□□□ 1.58
CTSB-215ENST00000528965 NCOA2Q15596 1464 aa24.93■■□□□ 1.58
CTSB-215ENST00000528965 CLTCQ00610 1675 aaKnown RBP24.93■■□□□ 1.58
CTSB-215ENST00000528965 PPP6R1Q9UPN7 881 aa24.92■■□□□ 1.58
CTSB-215ENST00000528965 NCOA1Q15788 1441 aa24.92■■□□□ 1.58
CTSB-215ENST00000528965 CCDC141Q6ZP82 1450 aa24.91■■□□□ 1.58
CTSB-215ENST00000528965 GGT6Q6P531 493 aa24.9■■□□□ 1.58
CTSB-215ENST00000528965 CAMSAP2Q08AD1 1489 aa24.89■■□□□ 1.58
CTSB-215ENST00000528965 RSPH4AQ5TD94 716 aa24.87■■□□□ 1.57
CTSB-215ENST00000528965 VPS8Q8N3P4 1428 aa24.86■■□□□ 1.57
CTSB-215ENST00000528965 CAMSAP1Q5T5Y3 1602 aa24.86■■□□□ 1.57
CTSB-215ENST00000528965 MYO3AQ8NEV4 1616 aa24.86■■□□□ 1.57
CTSB-215ENST00000528965 ZNF142P52746 1687 aaPredicted RBP24.86■■□□□ 1.57
CTSB-215ENST00000528965 DHX29Q7Z478 1369 aaKnown RBP24.85■■□□□ 1.57
CTSB-215ENST00000528965 PTPRKQ15262 1439 aa24.85■■□□□ 1.57
CTSB-215ENST00000528965 FAM135AQ9P2D6 1515 aa24.84■■□□□ 1.57
CTSB-215ENST00000528965 CEP170BQ9Y4F5 1589 aaPredicted RBP24.82■■□□□ 1.56
CTSB-215ENST00000528965 ARHGEF5Q12774 1597 aa24.81■■□□□ 1.56
CTSB-215ENST00000528965 PLA2R1Q13018 1463 aa24.81■■□□□ 1.56
CTSB-215ENST00000528965 LRRC9Q6ZRR7 1453 aa24.8■■□□□ 1.56
CTSB-215ENST00000528965 KDM5DQ9BY66 1539 aa24.78■■□□□ 1.56
CTSB-215ENST00000528965 IQSEC2Q5JU85 1478 aa24.77■■□□□ 1.56
CTSB-215ENST00000528965 KIF3BO15066 747 aa24.76■■□□□ 1.55
CTSB-215ENST00000528965 TSPY4P0CV99 314 aa24.76■■□□□ 1.55
CTSB-215ENST00000528965 TSPY10P0CW01 314 aa24.76■■□□□ 1.55
CTSB-215ENST00000528965 PKD2Q13563 968 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms