RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 MYT1Q01538 1121 aa26.34■■□□□ 1.81
TM9SF1-206ENST00000528669 ABCC5O15440 1437 aa26.33■■□□□ 1.81
TM9SF1-206ENST00000528669 RAPGEF6Q8TEU7 1601 aa26.31■■□□□ 1.8
TM9SF1-206ENST00000528669 DNMT1P26358 1616 aaKnown RBP26.31■■□□□ 1.8
TM9SF1-206ENST00000528669 ROCK1Q13464 1354 aa26.3■■□□□ 1.8
TM9SF1-206ENST00000528669 GRIN2AQ12879 1464 aa26.29■■□□□ 1.8
TM9SF1-206ENST00000528669 EIF4G3O43432 1585 aaKnown RBP26.27■■□□□ 1.8
TM9SF1-206ENST00000528669 ANKRD30BQ9BXX2 1392 aa26.27■■□□□ 1.8
TM9SF1-206ENST00000528669 HNRNPUQ00839 825 aaKnown RBP eCLIP26.26■■□□□ 1.79
TM9SF1-206ENST00000528669 CDK11AQ9UQ88 783 aaPredicted RBP26.26■■□□□ 1.79
TM9SF1-206ENST00000528669 C11orf95C9JLR9 678 aaPredicted RBP26.25■■□□□ 1.79
TM9SF1-206ENST00000528669 SLC4A1APQ9BWU0 796 aaKnown RBP26.24■■□□□ 1.79
TM9SF1-206ENST00000528669 NBPF8Q3BBV2 869 aa26.24■■□□□ 1.79
TM9SF1-206ENST00000528669 PRG4Q92954 1404 aaPredicted RBP26.24■■□□□ 1.79
TM9SF1-206ENST00000528669 RPRD2Q5VT52 1461 aaKnown RBP26.23■■□□□ 1.79
TM9SF1-206ENST00000528669 CNTLNQ9NXG0 1405 aa26.2■■□□□ 1.79
TM9SF1-206ENST00000528669 TEX14Q8IWB6 1497 aa26.19■■□□□ 1.78
TM9SF1-206ENST00000528669 PLB1Q6P1J6 1458 aa26.18■■□□□ 1.78
TM9SF1-206ENST00000528669 CFDP1Q9UEE9 299 aaPredicted RBP26.17■■□□□ 1.78
TM9SF1-206ENST00000528669 TROQ12816 1431 aaPredicted RBP26.17■■□□□ 1.78
TM9SF1-206ENST00000528669 CCDC184Q52MB2 194 aa26.17■■□□□ 1.78
TM9SF1-206ENST00000528669 CHMP7Q8WUX9 453 aaPredicted RBP26.17■■□□□ 1.78
TM9SF1-206ENST00000528669 CCDC7Q96M83 1385 aa26.17■■□□□ 1.78
TM9SF1-206ENST00000528669 NCOA1Q15788 1441 aa26.17■■□□□ 1.78
TM9SF1-206ENST00000528669 ZNF777Q9ULD5 760 aaPredicted RBP26.16■■□□□ 1.78
TM9SF1-206ENST00000528669 CAMSAP2Q08AD1 1489 aa26.16■■□□□ 1.78
TM9SF1-206ENST00000528669 FBLN2P98095 1184 aa26.16■■□□□ 1.78
TM9SF1-206ENST00000528669 CEP170Q5SW79 1584 aa26.14■■□□□ 1.77
TM9SF1-206ENST00000528669 KIF14Q15058 1648 aa26.12■■□□□ 1.77
TM9SF1-206ENST00000528669 PZPP20742 1482 aa26.11■■□□□ 1.77
TM9SF1-206ENST00000528669 GPATCH8Q9UKJ3 1502 aaKnown RBP26.11■■□□□ 1.77
TM9SF1-206ENST00000528669 ERCC6Q03468 1493 aa26.1■■□□□ 1.77
TM9SF1-206ENST00000528669 MAGI1Q96QZ7 1491 aaPredicted RBP26.09■■□□□ 1.77
TM9SF1-206ENST00000528669 ITSN2Q9NZM3 1697 aa26.09■■□□□ 1.77
TM9SF1-206ENST00000528669 PRKRIP1Q9H875 184 aaPredicted RBP26.08■■□□□ 1.77
TM9SF1-206ENST00000528669 IRX6P78412 446 aaPredicted RBP26.07■■□□□ 1.76
TM9SF1-206ENST00000528669 SYNJ2O15056 1496 aa26.06■■□□□ 1.76
TM9SF1-206ENST00000528669 ADGBQ8N7X0 1667 aa26.06■■□□□ 1.76
TM9SF1-206ENST00000528669 KIF7Q2M1P5 1343 aa26.06■■□□□ 1.76
TM9SF1-206ENST00000528669 SPATA31E1Q6ZUB1 1445 aa26.05■■□□□ 1.76
TM9SF1-206ENST00000528669 FAM9BQ8IZU0 186 aa26.04■■□□□ 1.76
TM9SF1-206ENST00000528669 JPH4Q96JJ6 628 aa26.04■■□□□ 1.76
TM9SF1-206ENST00000528669 ADCY10Q96PN6 1610 aa26.02■■□□□ 1.76
TM9SF1-206ENST00000528669 MRS2Q9HD23 443 aa26.02■■□□□ 1.76
TM9SF1-206ENST00000528669 CARMIL2Q6F5E8 1435 aa26.01■■□□□ 1.75
TM9SF1-206ENST00000528669 CROCC2H7BZ55 1655 aa26■■□□□ 1.75
TM9SF1-206ENST00000528669 ZNF326Q5BKZ1 582 aaKnown RBP26■■□□□ 1.75
TM9SF1-206ENST00000528669 PKD2Q13563 968 aa25.99■■□□□ 1.75
TM9SF1-206ENST00000528669 KIAA1107Q9UPP5 1409 aa25.99■■□□□ 1.75
TM9SF1-206ENST00000528669 ADGRL2O95490 1459 aa25.98■■□□□ 1.75
TM9SF1-206ENST00000528669 POLR1AO95602 1720 aaPredicted RBP25.98■■□□□ 1.75
TM9SF1-206ENST00000528669 ANKRD30AQ9BXX3 1397 aa25.97■■□□□ 1.75
TM9SF1-206ENST00000528669 RBM19Q9Y4C8 960 aaKnown RBP25.96■■□□□ 1.75
TM9SF1-206ENST00000528669 NUP160Q12769 1436 aa25.95■■□□□ 1.74
TM9SF1-206ENST00000528669 MBD5Q9P267 1494 aa25.94■■□□□ 1.74
TM9SF1-206ENST00000528669 ANKRD50Q9ULJ7 1429 aa25.93■■□□□ 1.74
TM9SF1-206ENST00000528669 PLEKHD1A6NEE1 506 aa25.93■■□□□ 1.74
TM9SF1-206ENST00000528669 CNGB1Q14028 1251 aaPredicted RBP25.93■■□□□ 1.74
TM9SF1-206ENST00000528669 POLR3GLQ9BT43 218 aa25.93■■□□□ 1.74
TM9SF1-206ENST00000528669 CDC42BPAQ5VT25 1732 aa25.92■■□□□ 1.74
TM9SF1-206ENST00000528669 USP47Q96K76 1375 aa25.89■■□□□ 1.74
TM9SF1-206ENST00000528669 ATP10BO94823 1461 aa25.88■■□□□ 1.73
TM9SF1-206ENST00000528669 BCORL1Q5H9F3 1711 aa25.87■■□□□ 1.73
TM9SF1-206ENST00000528669 ABCA8O94911 1581 aa25.87■■□□□ 1.73
TM9SF1-206ENST00000528669 NUP155O75694 1391 aa25.87■■□□□ 1.73
TM9SF1-206ENST00000528669 ANP32EQ9BTT0 268 aa25.87■■□□□ 1.73
TM9SF1-206ENST00000528669 ABCC10Q5T3U5 1492 aa25.86■■□□□ 1.73
TM9SF1-206ENST00000528669 C9orf84Q5VXU9 1444 aa25.85■■□□□ 1.73
TM9SF1-206ENST00000528669 ZBED9Q6R2W3 1325 aa25.85■■□□□ 1.73
TM9SF1-206ENST00000528669 DHX29Q7Z478 1369 aaKnown RBP25.82■■□□□ 1.72
TM9SF1-206ENST00000528669 HNRNPMP52272 730 aaKnown RBP eCLIP25.81■■□□□ 1.72
TM9SF1-206ENST00000528669 KDM5CP41229 1560 aa25.81■■□□□ 1.72
TM9SF1-206ENST00000528669 TSPY4P0CV99 314 aa25.8■■□□□ 1.72
TM9SF1-206ENST00000528669 TSPY10P0CW01 314 aa25.8■■□□□ 1.72
TM9SF1-206ENST00000528669 SHANK2Q9UPX8 1470 aa25.8■■□□□ 1.72
TM9SF1-206ENST00000528669 KDM2AQ9Y2K7 1162 aa25.77■■□□□ 1.72
TM9SF1-206ENST00000528669 CARD11Q9BXL7 1154 aa25.75■■□□□ 1.71
TM9SF1-206ENST00000528669 KIF15Q9NS87 1388 aa25.75■■□□□ 1.71
TM9SF1-206ENST00000528669 PPP4R2Q9NY27 417 aa25.74■■□□□ 1.71
TM9SF1-206ENST00000528669 UHRF1BP1Q6BDS2 1440 aa25.74■■□□□ 1.71
TM9SF1-206ENST00000528669 ERICH6BQ5W0A0 696 aa25.73■■□□□ 1.71
TM9SF1-206ENST00000528669 RALGAPBQ86X10 1494 aa25.73■■□□□ 1.71
TM9SF1-206ENST00000528669 KDM5DQ9BY66 1539 aa25.7■■□□□ 1.71
TM9SF1-206ENST00000528669 DCAF11Q8TEB1 546 aa25.69■■□□□ 1.7
TM9SF1-206ENST00000528669 PTPRGP23470 1445 aa25.69■■□□□ 1.7
TM9SF1-206ENST00000528669 ARID4BQ4LE39 1312 aaPredicted RBP25.68■■□□□ 1.7
TM9SF1-206ENST00000528669 SENP3-EIF4A1A0A087X0R7 540 aa25.68■■□□□ 1.7
TM9SF1-206ENST00000528669 ARHGEF12Q9NZN5 1544 aa25.67■■□□□ 1.7
TM9SF1-206ENST00000528669 B4GALNT3Q6L9W6 998 aa25.67■■□□□ 1.7
TM9SF1-206ENST00000528669 ST20-MTHFSA0A0A6YYL1 179 aa25.66■■□□□ 1.7
TM9SF1-206ENST00000528669 ARHGEF5Q12774 1597 aa25.66■■□□□ 1.7
TM9SF1-206ENST00000528669 SAMD9LQ8IVG5 1584 aa25.65■■□□□ 1.7
TM9SF1-206ENST00000528669 CDC42BPBQ9Y5S2 1711 aa25.64■■□□□ 1.7
TM9SF1-206ENST00000528669 CCDC141Q6ZP82 1450 aa25.62■■□□□ 1.69
TM9SF1-206ENST00000528669 ROCK2O75116 1388 aaKnown RBP25.62■■□□□ 1.69
TM9SF1-206ENST00000528669 MSH5O43196 834 aa25.59■■□□□ 1.69
TM9SF1-206ENST00000528669 PREX2Q70Z35 1606 aa25.59■■□□□ 1.69
TM9SF1-206ENST00000528669 FAM135AQ9P2D6 1515 aa25.59■■□□□ 1.69
TM9SF1-206ENST00000528669 SMG6Q86US8 1419 aaKnown RBP25.59■■□□□ 1.69
TM9SF1-206ENST00000528669 TMC1Q8TDI8 760 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms